Caenorhabditis remanei (nematode): GCK72_001401
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Entry
GCK72_001401 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03040
Spliceosome
crq04141
Protein processing in endoplasmic reticulum
crq04144
Endocytosis
crq04213
Longevity regulating pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GCK72_001401
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GCK72_001401
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
GCK72_001401
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
GCK72_001401
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crq01009
]
GCK72_001401
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crq03041
]
GCK72_001401
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_001401
03110 Chaperones and folding catalysts [BR:
crq03110
]
GCK72_001401
04131 Membrane trafficking [BR:
crq04131
]
GCK72_001401
03051 Proteasome [BR:
crq03051
]
GCK72_001401
03029 Mitochondrial biogenesis [BR:
crq03029
]
GCK72_001401
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crq04147
]
GCK72_001401
Protein phosphatases and associated proteins [BR:
crq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
GCK72_001401
Spliceosome [BR:
crq03041
]
Complex B
Other components
Prp19 complex
GCK72_001401
Complex C
Prp19-CDC5 complex
GCK72_001401
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
GCK72_001401
Chaperones and folding catalysts [BR:
crq03110
]
Heat shock proteins
HSP70 / DNAK
GCK72_001401
Membrane trafficking [BR:
crq04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
GCK72_001401
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
GCK72_001401
Proteasome [BR:
crq03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
GCK72_001401
Mitochondrial biogenesis [BR:
crq03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
GCK72_001401
Exosome [BR:
crq04147
]
Exosomal proteins
Proteins found in most exosomes
GCK72_001401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
ParM_N
ATP-synt_ab_Xtn
Motif
Other DBs
NCBI-GeneID:
9809786
NCBI-ProteinID:
XP_003105150
UniProt:
E3MFI7
LinkDB
All DBs
Position
I:7318223..7320429
Genome browser
AA seq
642 aa
AA seq
DB search
MSFCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA
RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFAVKAKQGKPVVEVEVKGEKREFNAEEIS
AMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAA
LAYGLDKGINEEKNVLIFDLGGGTFDVSILSIAEGSIFEVRSTAGDTHLGGEDFDSRMLQ
HFMNEFKRKTGKDISPNPRAIRRLRTACERAKRTLSSSTEATVEVDSLFDGTDFYSKITR
ARFEELCADLFRKTLEPVEKALRDAKIDKGHIDEVVLVGGSTRVPKIQKLLKDFFNGKEL
NCSINPDEAVAFGAAVQAAILSGVKDETIKDVLLVDVAPLSLGIETAGGVMTNLIDRNTR
IPAKASKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELTGIPPAPRGVPQIDVTFD
IDANGILNVSAEDKSTGKSNRITIRNEKGRLSQIEIDRMVNEAKQFEREDAEQRDKVSAR
NQLEGYAFQVKQALEEHGDKLSSEDRSRAKEAVEDTLRWMEANTLAEKDEIESKDRELKA
VCQAILTKLHQSGGQQTGCGNPGSGGFNPSNYPQGPTVEEVD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttgcaaagctatcggaatcgaccttggaaccacgtattcgtgtgttggaata
tatcaaaatggaaaggtcgaaattcttgccaactcagaaggtaacaagaccacaccttcc
tacgtggcattcacagataccgagagacttgttggtgatgccgccaaagatcaagccgct
cgtaatccagaaaacacagtcttcgatgcaaagcgtcttattggaagacgctttgacgag
gaaactgttcaatcggatatcaagcattggccatttgccgtcaaagcgaaacaaggaaaa
ccagttgttgaagttgaggtcaaaggagagaaaagagagttcaacgcagaagaaatctca
gcaatggtgctccagaaaatgaaggaaaccgcggagacatatttaggacatactgttaag
gatgctgtgattactgtacctgcctacttcaatgacagtcagcgtcaagctaccaaagat
gctgcaaccattgctggtctcaatgctattcgtatcatcaatgaaccaactgcagctgct
ctcgcttacggattggacaagggaatcaatgaggagaaaaacgttttgatcttcgatttg
ggaggtggtacattcgatgtatcaattctatcgatcgctgaaggatccattttcgaagtg
agatctaccgccggagatactcatctcggaggtgaagatttcgactccagaatgctccaa
cattttatgaatgagttcaaacggaaaaccggaaaagacatttctccgaatccacgtgct
attcgccgccttcgaacagcttgtgaacgtgccaagagaacattgtccagctctaccgag
gctactgtagaagtggattccttgtttgatggaactgacttctattccaaaatcacacgt
gctcgattcgaagaactttgtgctgatttgttccgaaagacattggagcccgttgaaaag
gcattgagagatgcaaagatagataagggacacattgatgaagttgtgttggtcggaggt
tccacgagagttccgaagattcagaaattgcttaaggattttttcaatggaaaggaactc
aactgctccatcaatccagacgaagccgtcgctttcggcgcagctgttcaagctgcaatt
ctctccggagtgaaggatgaaacaatcaaagacgttttacttgttgatgtagccccattg
agtcttggaattgagactgccggaggagtgatgacaaatctcatcgaccgtaacactcgc
attccagctaaagcatcgaagaccttcactacctatgctgataatcaaccgggtgtttct
attcaagtctacgaaggagagcgtgccatgactcgggataatcaccgactgggaacgttt
gaattgactggaataccaccagcaccacgtggagtcccacaaatcgatgtcacatttgat
attgacgcaaacggaatcttgaatgtgtcggctgaggataaatccactggaaagtctaac
cgtatcacaatccgcaatgagaagggaagattgtctcaaattgaaatcgatagaatggtc
aatgaagcgaaacaattcgagagagaagatgcagaacaacgtgacaaagtctctgctaga
aatcagctcgaaggttatgcattccaagtgaaacaagcactcgaggagcacggagacaaa
ttgtcatctgaagacagaagtcgtgcaaaggaagctgttgaggatacacttcgttggatg
gaagcaaacacgttggctgagaaggatgagattgaatccaaggatagagagttgaaagct
gtttgccaggctattctgaccaagttgcatcagtcaggtggtcaacagacaggatgtggt
aatccaggttctggtggattcaaccctagcaattatcctcagggacctactgtggaggaa
gttgattaa
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