Caenorhabditis remanei (nematode): GCK72_001434
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Entry
GCK72_001434 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03440
Homologous recombination
crq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCK72_001434
03460 Fanconi anemia pathway
GCK72_001434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_001434
Enzymes [BR:
crq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GCK72_001434
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
GCK72_001434
FA (Fanconi anemia) pathway
Downstream FA components
GCK72_001434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
BrxL_ATPase
Motif
Other DBs
NCBI-GeneID:
9802931
NCBI-ProteinID:
XP_053591611
UniProt:
A0A6A5HTD5
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All DBs
Position
I:7504406..7508056
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AA seq
983 aa
AA seq
DB search
MSAEQFFGLFKKQKGRNTPSVRKPFKVKREDGGGDSEDPNAPKTHEIAPEIVKKSRAGKR
KRIEIKNDDFNQLMMQSVPVRYPKGLTLYPTQKLMIVRIIKAIQNSENVLGESPTGSGKT
MALLSSTCAWLKQYMDQKKESREKCAIHGDGAFGGNMKYEETEDTIKEEMNETRDVKPMV
PVKNENLFEDEWKDDFIAHSIPAAGIKIEEKPDVKPEVKKEPSEKGAQAECTCLPRVRIY
YGTRTHKQIAQVVKEFSRLPYANIIKHTILASRDQSCIHPLARKQPDISQFCKEINSANG
IGCSFKSAMRPKFEKAQPLRDHLRNNGSVVFDIEQVVETLALSYPQICPYFSTNRVLTQD
ADLIFCPFSYLVDPLIRNSSDVHIKNSIVILDEAHNIEDTCRDAASFSFTEKELDDSLLS
LRLKKVAIDQVNANKTPEDALHQTPDLTIELNEFRQHLLYLELLILEMLRWVRHVAQDAR
KPARGGMDGFKTCTLSSGNLFASLTNAENGIDLFTPPKTPKYDAISVAFSGVTKHNEPEM
QHMDQFKPSATAIVCIEKWLYFQSFFGNQQYQPTYRLNVSIEPINQTGRFNRTFDGDLSM
SSSFSSTPSLKTRSSAGPRNMQYKEENPWLQENDDDDWKDPSISQTGHKAISEGCKTTIS
LWCMSPALSFYDAFSETRSIILASGTLCPMDTLKTELGMEFKQQVEGDQVISPDNIFAAV
IPFGPHGNRITCTFRNTSDPSSPFYEEIASIIKYVCMHVPAGILCFLPSYRVLEQLKTCM
LRNHSMKHIQTKKVVLFEPRKSSELTAVMDEFDSAIFNPTNFGESINGALMFAVFRGKVS
EGIDFADDRARVVISVGIPYPNAMDDQVNAKKSYNDQNSKDLGILTGDEWYTTQAYRALN
QALGRCLRHKNDWGAMLLIDDRLERQTEKIMTGATSARVSKWIRAQLKNYRDFKQFNQNF
RVFIEGRQNVKNVKKEKEDIVDE
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagaacaattctttgggttgttcaaaaaacagaaagggagaaatacaccaagc
gttcgaaaacctttcaaagttaaaagagaagacggtggaggagactccgaagatcccaat
gctccgaaaactcatgaaattgctccggaaattgtaaaaaagtcgcgagctggaaaacga
aaacggattgaaattaaaaacgatgatttcaatcagttgatgatgcaaagtgttccagtc
agatatccgaaagggttgactctttatccaactcaaaaattaatgattgttcgaatcata
aaagcgattcagaatagtgaaaatgttttgggagaatctccgacgggcagtggaaaaaca
atggctttgttgtcttctacatgtgcatggttgaagcaatatatggatcagaagaaagaa
tccagagagaagtgtgcgattcacggagatggagcatttggaggaaatatgaaatatgag
gaaactgaagatacgataaaagaagaaatgaacgagacgagagatgtcaaaccgatggtt
ccagtgaaaaatgaaaatcttttcgaagatgaatggaaagacgatttcatagcacactca
attccagctgctggtattaaaatcgaagaaaaacctgatgtgaaaccagaagtgaaaaaa
gaaccgagtgagaaaggagcacaagctgaatgtacctgccttccgcgtgttcgtatctac
tatggaaccagaacacataaacaaatcgctcaagttgtcaaagagttctcgcgtcttcca
tatgcaaacattatcaagcacacaattctcgccagtcgtgatcaatcttgcattcatcca
ttggctcgaaaacaaccggatatttcacagttctgcaaggaaatcaacagtgccaacggg
attggctgctcattcaaatctgcaatgagaccgaagtttgaaaaagcgcaaccactgaga
gatcacttgcggaataatggatcggtggtattcgatatcgaacaagtggtggagaccctc
gccttatcctatcctcaaatatgtccctacttctctacaaatcgtgttttgactcaagat
gctgacctgattttctgtccattctcttatttggttgacccattgattcgaaattcatca
gatgttcacattaagaattcaattgtcattttagacgaagcacataatatcgaagacacg
tgtcgtgatgcagctagcttctcgttcactgaaaaagagctcgatgactctttactgtct
cttcgactgaaaaaagtagcgatagatcaagtgaatgcaaacaagacacctgaagacgca
ctacaccagacacctgacttgacaatcgaactcaatgagttcagacaacatcttctctat
ttggaacttctgattttggaaatgctcagatgggttcggcacgtggcacaggatgcaagg
aagcctgcaagaggtggaatggatggtttcaagacatgtaccttgtcgtctggaaatctt
ttcgcgtcactcacaaatgcagaaaatggaattgatctattcacgccacccaagacgcca
aaatacgatgccatatctgtcgctttctccggtgtcacaaagcataatgaacctgaaatg
cagcatatggatcagttcaaacccagtgccactgcaatcgtgtgtatcgagaaatggctc
tattttcagtcattctttggaaatcagcagtatcaaccaacatatagactgaatgtatcc
atcgaaccgatcaaccagacaggcagattcaacagaactttcgatggtgatctatcgatg
tcatcttccttctcatcaactccatcactgaaaacaagaagttctgccggcccgagaaat
atgcaatataaagaagaaaatccatggttacaggagaatgacgatgatgattggaaagat
ccatcaatatcacaaactggtcataaagcgatttcagagggatgtaaaactacaatcagt
ctgtggtgtatgagtccagctctctcgttttacgacgccttcagtgagactcggtcgatc
attctggcatctggaactctttgtccgatggatactctaaaaactgaactaggaatggag
ttcaaacaacaggttgaaggagatcaagtcatttcaccggataacatttttgcggcagtg
ataccattcggtccacatggaaaccgaattacgtgcacttttcggaacacctcagatcca
agttctccgttttatgaagaaatcgcatcgattataaaatacgtttgcatgcatgttcca
gctggtattctctgctttcttccatcatatcgtgtcctcgaacaattgaaaacatgcatg
cttcgtaaccacagtatgaaacatattcaaaccaaaaaagtggtactcttcgagccgaga
aagtcatctgaattgacagctgtcatggatgaattcgattcggctattttcaatccaacc
aatttcggagaatcaattaacggagcactgatgtttgcagtgtttcgtggaaaagtttcc
gaaggaattgattttgctgatgatcgtgctcgagttgttatctctgttggtattccatat
ccgaatgcaatggatgatcaagttaatgcaaagaaatcgtataatgatcaaaattcaaaa
gatttgggaatcctcactggagatgagtggtacacaacgcaagcatatcgtgcattgaat
caagctcttggtagatgtctccgtcataaaaatgattggggagcaatgcttttgatcgat
gatcgtctggaacgacaaacagaaaagattatgactggtgcaacgtcggctcgtgtttcc
aaatggattcgtgctcaattgaagaattatcgggatttcaagcaattcaatcagaatttc
cgagtattcatcgaaggacgacaaaatgtcaaaaatgtgaaaaaggaaaaagaagatatt
gttgatgaataa
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