KEGG   Caenorhabditis remanei (nematode): GCK72_001434
Entry
GCK72_001434      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K15362  fanconi anemia group J protein [EC:5.6.2.3]
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03440  Homologous recombination
crq03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    GCK72_001434
   03460 Fanconi anemia pathway
    GCK72_001434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crq03400]
    GCK72_001434
Enzymes [BR:crq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     GCK72_001434
DNA repair and recombination proteins [BR:crq03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     GCK72_001434
   FA (Fanconi anemia) pathway
    Downstream FA components
     GCK72_001434
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 DEAD ResIII BrxL_ATPase
Other DBs
NCBI-GeneID: 9802931
NCBI-ProteinID: XP_053591611
UniProt: A0A6A5HTD5
LinkDB
Position
I:7504406..7508056
AA seq 983 aa
MSAEQFFGLFKKQKGRNTPSVRKPFKVKREDGGGDSEDPNAPKTHEIAPEIVKKSRAGKR
KRIEIKNDDFNQLMMQSVPVRYPKGLTLYPTQKLMIVRIIKAIQNSENVLGESPTGSGKT
MALLSSTCAWLKQYMDQKKESREKCAIHGDGAFGGNMKYEETEDTIKEEMNETRDVKPMV
PVKNENLFEDEWKDDFIAHSIPAAGIKIEEKPDVKPEVKKEPSEKGAQAECTCLPRVRIY
YGTRTHKQIAQVVKEFSRLPYANIIKHTILASRDQSCIHPLARKQPDISQFCKEINSANG
IGCSFKSAMRPKFEKAQPLRDHLRNNGSVVFDIEQVVETLALSYPQICPYFSTNRVLTQD
ADLIFCPFSYLVDPLIRNSSDVHIKNSIVILDEAHNIEDTCRDAASFSFTEKELDDSLLS
LRLKKVAIDQVNANKTPEDALHQTPDLTIELNEFRQHLLYLELLILEMLRWVRHVAQDAR
KPARGGMDGFKTCTLSSGNLFASLTNAENGIDLFTPPKTPKYDAISVAFSGVTKHNEPEM
QHMDQFKPSATAIVCIEKWLYFQSFFGNQQYQPTYRLNVSIEPINQTGRFNRTFDGDLSM
SSSFSSTPSLKTRSSAGPRNMQYKEENPWLQENDDDDWKDPSISQTGHKAISEGCKTTIS
LWCMSPALSFYDAFSETRSIILASGTLCPMDTLKTELGMEFKQQVEGDQVISPDNIFAAV
IPFGPHGNRITCTFRNTSDPSSPFYEEIASIIKYVCMHVPAGILCFLPSYRVLEQLKTCM
LRNHSMKHIQTKKVVLFEPRKSSELTAVMDEFDSAIFNPTNFGESINGALMFAVFRGKVS
EGIDFADDRARVVISVGIPYPNAMDDQVNAKKSYNDQNSKDLGILTGDEWYTTQAYRALN
QALGRCLRHKNDWGAMLLIDDRLERQTEKIMTGATSARVSKWIRAQLKNYRDFKQFNQNF
RVFIEGRQNVKNVKKEKEDIVDE
NT seq 2952 nt   +upstreamnt  +downstreamnt
atgtctgcagaacaattctttgggttgttcaaaaaacagaaagggagaaatacaccaagc
gttcgaaaacctttcaaagttaaaagagaagacggtggaggagactccgaagatcccaat
gctccgaaaactcatgaaattgctccggaaattgtaaaaaagtcgcgagctggaaaacga
aaacggattgaaattaaaaacgatgatttcaatcagttgatgatgcaaagtgttccagtc
agatatccgaaagggttgactctttatccaactcaaaaattaatgattgttcgaatcata
aaagcgattcagaatagtgaaaatgttttgggagaatctccgacgggcagtggaaaaaca
atggctttgttgtcttctacatgtgcatggttgaagcaatatatggatcagaagaaagaa
tccagagagaagtgtgcgattcacggagatggagcatttggaggaaatatgaaatatgag
gaaactgaagatacgataaaagaagaaatgaacgagacgagagatgtcaaaccgatggtt
ccagtgaaaaatgaaaatcttttcgaagatgaatggaaagacgatttcatagcacactca
attccagctgctggtattaaaatcgaagaaaaacctgatgtgaaaccagaagtgaaaaaa
gaaccgagtgagaaaggagcacaagctgaatgtacctgccttccgcgtgttcgtatctac
tatggaaccagaacacataaacaaatcgctcaagttgtcaaagagttctcgcgtcttcca
tatgcaaacattatcaagcacacaattctcgccagtcgtgatcaatcttgcattcatcca
ttggctcgaaaacaaccggatatttcacagttctgcaaggaaatcaacagtgccaacggg
attggctgctcattcaaatctgcaatgagaccgaagtttgaaaaagcgcaaccactgaga
gatcacttgcggaataatggatcggtggtattcgatatcgaacaagtggtggagaccctc
gccttatcctatcctcaaatatgtccctacttctctacaaatcgtgttttgactcaagat
gctgacctgattttctgtccattctcttatttggttgacccattgattcgaaattcatca
gatgttcacattaagaattcaattgtcattttagacgaagcacataatatcgaagacacg
tgtcgtgatgcagctagcttctcgttcactgaaaaagagctcgatgactctttactgtct
cttcgactgaaaaaagtagcgatagatcaagtgaatgcaaacaagacacctgaagacgca
ctacaccagacacctgacttgacaatcgaactcaatgagttcagacaacatcttctctat
ttggaacttctgattttggaaatgctcagatgggttcggcacgtggcacaggatgcaagg
aagcctgcaagaggtggaatggatggtttcaagacatgtaccttgtcgtctggaaatctt
ttcgcgtcactcacaaatgcagaaaatggaattgatctattcacgccacccaagacgcca
aaatacgatgccatatctgtcgctttctccggtgtcacaaagcataatgaacctgaaatg
cagcatatggatcagttcaaacccagtgccactgcaatcgtgtgtatcgagaaatggctc
tattttcagtcattctttggaaatcagcagtatcaaccaacatatagactgaatgtatcc
atcgaaccgatcaaccagacaggcagattcaacagaactttcgatggtgatctatcgatg
tcatcttccttctcatcaactccatcactgaaaacaagaagttctgccggcccgagaaat
atgcaatataaagaagaaaatccatggttacaggagaatgacgatgatgattggaaagat
ccatcaatatcacaaactggtcataaagcgatttcagagggatgtaaaactacaatcagt
ctgtggtgtatgagtccagctctctcgttttacgacgccttcagtgagactcggtcgatc
attctggcatctggaactctttgtccgatggatactctaaaaactgaactaggaatggag
ttcaaacaacaggttgaaggagatcaagtcatttcaccggataacatttttgcggcagtg
ataccattcggtccacatggaaaccgaattacgtgcacttttcggaacacctcagatcca
agttctccgttttatgaagaaatcgcatcgattataaaatacgtttgcatgcatgttcca
gctggtattctctgctttcttccatcatatcgtgtcctcgaacaattgaaaacatgcatg
cttcgtaaccacagtatgaaacatattcaaaccaaaaaagtggtactcttcgagccgaga
aagtcatctgaattgacagctgtcatggatgaattcgattcggctattttcaatccaacc
aatttcggagaatcaattaacggagcactgatgtttgcagtgtttcgtggaaaagtttcc
gaaggaattgattttgctgatgatcgtgctcgagttgttatctctgttggtattccatat
ccgaatgcaatggatgatcaagttaatgcaaagaaatcgtataatgatcaaaattcaaaa
gatttgggaatcctcactggagatgagtggtacacaacgcaagcatatcgtgcattgaat
caagctcttggtagatgtctccgtcataaaaatgattggggagcaatgcttttgatcgat
gatcgtctggaacgacaaacagaaaagattatgactggtgcaacgtcggctcgtgtttcc
aaatggattcgtgctcaattgaagaattatcgggatttcaagcaattcaatcagaatttc
cgagtattcatcgaaggacgacaaaatgtcaaaaatgtgaaaaaggaaaaagaagatatt
gttgatgaataa

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