KEGG   Caenorhabditis remanei (nematode): GCK72_001615
Entry
GCK72_001615      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K12877  protein mago nashi
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03013  Nucleocytoplasmic transport
crq03015  mRNA surveillance pathway
crq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GCK72_001615
  09122 Translation
   03013 Nucleocytoplasmic transport
    GCK72_001615
   03015 mRNA surveillance pathway
    GCK72_001615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crq03019]
    GCK72_001615
   03041 Spliceosome [BR:crq03041]
    GCK72_001615
Messenger RNA biogenesis [BR:crq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     GCK72_001615
Spliceosome [BR:crq03041]
 Complex C
  Other components
   EJC/TREX
    GCK72_001615
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 9817855
NCBI-ProteinID: XP_053591695
LinkDB
Position
I:8141866..8142377
AA seq 152 aa
MSADEEKSADFYVRYYVGHKGKFGHEFLEFEFRPNGALRYANNSNYKNDTMIRKEATVSE
SVLNELKRIIEDSEIMQEDDENWPEPDKIGRQELEILYKNEHISFTTGKIGALADVNNSK
DPDGLRSFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq 459 nt   +upstreamnt  +downstreamnt
atgagtgctgacgaggagaaatccgccgatttctacgtgcgatactacgttggacataag
ggaaagttcggtcacgagttccttgagttcgaattccgcccaaatggtgctcttcgctac
gcgaataactcgaactacaaaaacgatacaatgatccgcaaggaggctaccgtctcagag
tctgtgctcaatgagttgaagcgtatcatcgaagactcggagatcatgcaggaagacgac
gaaaactggcctgagcctgacaagattggacggcaagagctcgaaattctctacaaaaat
gagcacatttcgttcacaactggaaaaatcggcgcgttggccgatgtcaacaactcaaag
gacccagacggtctccgctcattctactatctggttcaggatctcaagtgcctcgtcttc
tctcttatcggacttcacttcaagattaagccaatctaa

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