Caenorhabditis remanei (nematode): GCK72_001684
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Entry
GCK72_001684 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
GCK72_001684
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
crq01001
]
GCK72_001684
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_001684
Enzymes [BR:
crq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
GCK72_001684
2.7.11.23 [RNA-polymerase]-subunit kinase
GCK72_001684
Protein kinases [BR:
crq01001
]
Serine/threonine kinases: CMGC group
CDK family
GCK72_001684
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
GCK72_001684
Brd4/P-TEFb complex
GCK72_001684
7SK RNP complex
GCK72_001684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Kinase-like
Pkinase_fungal
Kdo
Motif
Other DBs
NCBI-GeneID:
9819259
NCBI-ProteinID:
XP_003115003
UniProt:
E3LN78
LinkDB
All DBs
Position
I:complement(8359793..8362561)
Genome browser
AA seq
482 aa
AA seq
DB search
MSSQPYTAGLHQSSTQSHRQAAPKRPLPNRADEPPKRALIGQNGQNTPSGGGTPNSTGNA
EVDVKQQLLNYQKIFDHASYPFINDVSAYEKLSKIGQGTFGEVFKARCKTTGRMVALKKI
LMENEKEGFPITALREVKMLEQLKHQNITDLIEVCSAKTGSTSTSKDRTTFYLVFAFCEH
DLAGLLSNPKVRMSLVHIKTMMKHLITGLNKLHRSKILHRDMKAANVLISKEGVLKLADF
GLARPFVQRENPNHPRPLYTNRVVTLWYRPPELLLGDRAYGTKIDVWGAGCIMAEMWTRQ
PIMQGDTEQKQLTLISALCGSINPEVWPNCVKMPLYSAMAAEPNSALPQGKGRCLKLKIR
HLMKFDSADGKPQSDPYGKKTNDQVPSDDDAMNLLENLLAIDPDRRPTADEAEDDIWFYK
DPVPRANVGDLMDTIPTSQFEYTVGKGAHAGRGRHHNNPQRPHQAPRQSNAIPAGQYRDT
IF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcagccctacactgccggtcttcatcaatccagtactcagagtcatcgccaa
gcggctccgaagcggccgttacccaaccgtgccgatgagccgccaaaaagagcgcttatc
ggtcaaaacggtcaaaacacaccttcgggtggcgggacgccaaacagcaccggaaacgct
gaagtggatgtaaaacaacagttacttaactatcaaaaaatattcgatcatgcctcatat
ccattcattaatgatgtttctgcctacgagaagttaagtaaaattggacagggaacgttc
ggggaagtatttaaagcacgatgtaaaacaacgggtcgaatggtagcccttaaaaagatt
ttgatggaaaacgaaaaagaaggtttccctataacagctttaagagaagtaaaaatgttg
gaacaactcaaacatcagaatattaccgatttaattgaagtttgcagtgcgaagacaggt
tcaacatcgacgtctaaagatcgaacgacgttctatcttgtattcgcattctgtgaacac
gatctggctggtctgttatcaaatccaaaagtaaggatgtcgttagttcatatcaaaaca
atgatgaagcatttaataactggattgaataaattgcatcggagtaaaattctacacaga
gatatgaaggcagcgaatgtactgatatcaaaagaaggagtactcaagttagccgatttt
ggattggcgaggccgtttgtgcagagagaaaacccaaaccatccccgacctctttacaca
aatcgtgttgttactctttggtatcgtccgccagaacttcttctcggtgatcgggcatat
ggtacaaaaattgatgtgtggggcgctggatgtattatggctgaaatgtggacacggcag
ccgattatgcaaggagataccgagcagaagcaactcacgctgatctcagctctctgtgga
tcaattaatccagaggtttggccaaactgtgtgaaaatgccgctctactctgctatggcc
gccgaaccaaactcagctctcccacaaggaaaaggaagatgcttgaaattaaaaatacgg
catctcatgaagtttgattcagcagacggaaaaccacaatcggatccatatggaaagaaa
acgaatgaccaagtaccatcggacgacgatgcaatgaatcttctcgaaaacttgttggca
atcgatccagatagacgaccgacagccgatgaagcagaagatgatatttggttttacaag
gatccagtaccacgagcaaatgtcggagatttgatggataccataccgacatcccaattc
gagtatacagttggaaaaggagcacacgccgggcgcggacgtcatcacaataatccacaa
agacctcatcaagctcctcggcaatcgaatgcaattccagctggacaatatcgtgatacg
atattctga
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