Caenorhabditis remanei (nematode): GCK72_001693
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Entry
GCK72_001693 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GCK72_001693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crq03041
]
GCK72_001693
Spliceosome [BR:
crq03041
]
Complex C
Other components
Step II factors
GCK72_001693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
9817833
NCBI-ProteinID:
XP_003114876
UniProt:
E3LN68
LinkDB
All DBs
Position
I:8381366..8383440
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AA seq
568 aa
AA seq
DB search
MDALRAYGESDSEQSEDDVIMQEISKGKSVTLGTDRAIVMAPDVQSKSVIKEVAIVDPKT
KEIKSNPKFEQLFKSESGPVNPFKSEQQRSQKNTLTGFVEPAHLNEFHFNRQIRSFDTLG
YAQNPTAETGTSQFVGDVKKAETEKGVSLFESKKTGGEKRKRVRNDDSADVDGYTGPWSR
FADEKTVAKPSPELQKQMDEIVKKRQEKSRRFKKEKEDSEQMAEESSTLHLKEAEDYQGR
SFLVPPSFTGVNLREDYVPERCFVPKKLIHTYRGHNKGVNFLQWFPKSAHLFLSCSMDTK
IKLWEVYDRQRTVRTYSGHKLPVREVAFNNEGTEFLSASFDRYVKLWDTETGQVKQRFHT
GHVPYCLKYHPDEDKNHMFLVGMQNKKIIQWDSRSGEIVQEYDRHLQAVNSITFFDKNRR
FASTSDDKSVRIWEWEIPVDTKLIQNVGLHAIPTMTKSPNDKWVVGQCMDNRIVLFQLVD
DKLRFSKKKAFRGHNAAGYACNIDFSPDQSFLISGDADGKLFIWDWRTHKIVGKWKAHDS
TCIAALWHPHEKSRMITAGWDGLIKMWN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgctacgagcgtatggcgaaagtgacagtgaacaatcagaggacgatgttatc
atgcaagagatttccaaaggaaaatcagtaacacttggaacggatagagcaattgtaatg
gctccagatgttcagtcaaaaagtgtaatcaaagaagtagcaattgtggatccgaagaca
aaagagatcaaatcgaatccgaaattcgaacagctgttcaaatccgagtctggaccagta
aatcccttcaaatcagagcaacaacgttctcaaaaaaatactttaactggattcgtcgag
cccgctcatttgaatgaattccatttcaatcgtcaaatccggagttttgatactcttgga
tacgcccagaatccaactgcagaaactggaacttcacagtttgttggtgatgtcaaaaaa
gcagaaaccgagaaaggagtatcactgtttgaatcaaagaagactggtggtgaaaagaga
aaacgagtgagaaatgatgattcagctgacgtcgacgggtacacaggaccatggagtcga
tttgcagatgagaagactgtggcaaagccatctccagaacttcagaaacaaatggatgaa
attgttaagaagcgacaagaaaaaagtagaagattcaagaaagaaaaagaagacagtgaa
caaatggctgaagaaagctcaactcttcatctcaaagaagctgaagactaccaaggtcgc
tcattcctggttccacctagtttcacaggagtcaatcttcgagaagactacgttccggaa
cgatgctttgttcctaaaaaactcattcatacctatcgtggccacaacaaaggtgtcaat
ttccttcaatggttcccaaaaagtgctcatctattcctttcctgttcaatggatacaaaa
atcaagttgtgggaggtttatgatcgtcaacgaacggtgcgaacttattctggacataaa
cttccagtcagagaagttgcattcaataacgagggaactgaattcttatcagcttcattc
gatcgatatgtgaagttgtgggatactgaaacaggacaagttaaacaaagattccatact
ggacatgtcccgtattgtttgaaatatcatccagatgaagacaagaatcatatgttcttg
gttggaatgcaaaacaagaaaatcattcaatgggactcccgatctggagaaattgttcaa
gaatacgatcggcatcttcaggctgtaaactcgattacattctttgataaaaatcgacga
ttcgcatcgacttctgatgacaaatctgtcaggatttgggaatgggagattccagtagat
acgaaactcattcaaaatgttggtctacatgctattccaacgatgaccaagagtccaaat
gacaaatgggtggtcggacaatgtatggataaccgtatagttcttttccaactagtcgac
gacaagcttcgattctcgaaaaagaaggcttttcgcggacacaacgcagccggatatgca
tgcaacattgatttctctcctgatcaaagtttccttatttctggtgatgctgatggaaaa
ttattcatctgggattggagaacacataaaattgttggaaaatggaaggcacatgacagc
acgtgtattgctgcactgtggcatccgcatgagaagagtcgaatgattactgctggatgg
gatggactcatcaaaatgtggaattga
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