Caenorhabditis remanei (nematode): GCK72_001782
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Entry
GCK72_001782 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_001782
Membrane trafficking [BR:
crq04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
GCK72_001782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_HPS5
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_EML_2
zf-RING_Vps41
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_RIG_2nd
zf-RING_16
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
zf_RING_Vps8
zf-RING_5
zf_RING_Vps8_fungal
SnoaL
Motif
Other DBs
NCBI-GeneID:
9817984
NCBI-ProteinID:
XP_053591769
UniProt:
A0A6A5HQN6
LinkDB
All DBs
Position
I:8705435..8709872
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AA seq
1168 aa
AA seq
DB search
MEEHNELPTTSRGNDDFIDQIPSHFLVELTSLDELAFPANSTKRVKYTCVASTSKSLCLG
TSTGSVYIFSRYAAKSRSRASSPVPVQVFTTRDGQISTISVSPSEELMAIGGDSGRVSIA
QLNNGQPPTLVYSTPGDARSPDRVMALTWSPDMKTVYSGHSSGSLHCHRLTNRSVFRAAH
QKLTKFDGEIVQLDTLQSHVLVATSLASHLYHAETGTIQQVGKKVRTSPSPLGACYIQDI
DGVSGGGSAFIVAARPNGRLWEANLVGVVYRTHQYRQSGQIPRAPPISFRTPFPTDSLQF
DGLHPDNQDVSIHKIHVIRVENGRLLIVSTCGSRICIVEMETSRVILSSELEFEILDVST
CSNDVFVLLADSKGLRKFSVFERLKCVEKLNLKGFFGQSAQTILFCASHVSFPSPIITKT
IEGLLTMSRKKETERLQGLLQKILDDRKASQSMYDNMEELERRESLKGKRKRDEKPEENM
SKKLPSGVHRVLQTAQCSGYDDDFSFSTPQALRERSRSSPCGPESPTPPNQPIIEKRASE
PSSLEIRQEFWRKNGTPDVVEEDILNRARLILEENSEKLIEKESLRTLLQLEGIKRDEIR
FTPTVTIGNAAKALAELAMAVPVDLSTIWNSKDVEEKSTSSEKSEKSLSTKKPTIVKVVR
PGIRPNTQHKKEKPVATVSPRSVNDDVIEDTSEDVASNNVTPISEEMRRKQDEMWLDLRL
SHIKKQSNPHSHAGTPTETVPKSDTDYTLTTDSDGPTPSGIWTNPLDEEEETDNVKTPTS
SSTMSSEFNCSTCGMHKSWAAASLLMAVCSSGEVIRDDFRRHASIPQSLGDWEKLLRHVA
MIDSKDNLSSICPRCEMSLSTVDRVCIEGWRSGMVEEGVRPNFTRIFERCMNSSKEKFET
IVARREDTEGLRVFKNIEKLEEISIKTIERATNSNHFSTKAVRSPSENSLVSIEACSKID
FSNPDCLRWIPAVPLKTLLALAVFTIGKKAVIQIISADHQWIAKRMKPQDWCSIVVIGAR
EFVFKDLLGGKTIASVFDSVGASEWVTPRKKKNAPIPSRKMSPISINSTQSSGNSTATIT
SWIVDTNGKCPMCTLPIKMIVGKTDRGVISYFCGHVFHKMCLADRYTTGCIACQSKARKA
VMAARSGSSATSTPTASPIMSPRHQRVG
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacacaatgagttgccgacaacgtcacgaggaaacgatgattttatcgaccaa
attccatcacattttctcgtcgagctcacctcactggatgagttggcatttcccgcaaat
tccacaaaacgggttaagtacacatgcgttgcgagtacatcgaaatcattgtgtcttgga
acatccactggatctgtctacatattctcaagatatgctgcaaaatccagatcaagagct
agttcaccagtccctgttcaagtgtttacaacaagagacggacagattagtacgatctca
gtaagcccatcagaagagctaatggcaatcggaggtgacagtggacgtgtttcaattgct
caattaaataatggacagcctccaactctagtatattcaacacctggagatgcccgttca
ccggatagagtgatggcattaacatggtcacccgatatgaaaactgtttattctggacat
tcatccgggtcattgcattgccatagattgacgaaccgatctgtttttcgtgcggcacat
caaaaactgacaaaattcgatggagaaattgtgcaattagatacgctacaatcgcacgta
ctcgtcgccacatcactagcatcccatctttatcatgcagaaactggaacaatacagcaa
gtgggcaaaaaagttcgaacttctccatcaccactcggtgcttgctatattcaagacata
gatggtgttagtggtggtggaagtgcattcattgtggcagctaggccaaatggaaggctg
tgggaagcgaatttagttggagtagtctacagaactcatcaatatcgtcaatctggtcag
attcctcgtgcaccaccaatttcttttcgtactccatttcccactgattcactacagttc
gatggccttcaccctgataatcaagatgtttctattcacaaaattcatgttatccgcgtt
gaaaacgggcgtcttcttatcgtttcgacgtgtggttccagaatatgtattgtagaaatg
gaaacgtcacgtgtaattttgtcatctgagttagaatttgagattttggatgtatccaca
tgttcgaatgatgtgttcgttttgttggcagattctaaaggattgaggaaattcagtgta
tttgagaggctgaaatgcgtggagaagttgaacttaaaaggatttttcggacagagtgcc
caaacgattctattctgtgcttctcatgtctcgttcccatctccaataattaccaaaacg
atcgaaggacttctgacaatgtcacgcaaaaaagaaactgaaagactccaaggacttctt
cagaagattctggatgatagaaaagcatcacaatctatgtacgataatatggaagaatta
gagagaagagaatcacttaaaggaaaaaggaaacgtgacgagaaaccagaagagaatatg
tcaaagaagttgccaagtggagtgcatagggtgcttcaaactgcccagtgtagtggttac
gacgatgatttctcgttctcaacgcctcaagctctccgtgaaagaagccgaagctctcca
tgcggaccagaatctccaacgcctccaaatcaaccaattattgaaaaacgagcatcagaa
ccttccagtttagaaattcggcaggagttttggagaaaaaatggaacaccagacgtcgtt
gaggaagacattctaaacagagcacgtctgattttagaggaaaactcagagaagttgata
gaaaaagaatcacttcgaactcttttacaattagaaggaatcaaacgagatgagattcgt
tttacgcctacagtaactattggaaatgcagctaaagctctggctgaattagctatggcg
gttccagtagatttatctacaatctggaacagcaaagatgtagaagaaaaatctacgtca
tcagaaaaatcagagaagtctttatctacgaaaaaaccgacaattgtgaaagtagttaga
cctggaattcgaccaaacactcaacataaaaaagagaaacctgtggctacagtatcccca
agatctgtgaatgatgacgtcattgaggatacttctgaagacgtggcatctaataatgtg
acaccgatttcggaagaaatgagacggaaacaagatgagatgtggttggatttaaggctc
tcacatatcaaaaaacaatctaatcctcattctcatgccggcactcctacagaaactgtt
ccgaaatcggatacggactacactctcactacggattcggacggtcccacaccttcagga
atatggactaatccattggatgaggaagaagaaacagacaacgttaaaactccaacgtct
tcctcaactatgtcatcagaattcaattgttcaacatgtggaatgcataaatcgtgggcc
gctgcatctcttctgatggctgtttgtagtagtggcgaagttattcgagatgatttccgt
cggcacgcttccattcctcaatccttaggagactgggagaaattacttcgtcatgtggca
atgatagatagcaaagataatttatcctcgatttgcccgcgatgtgaaatgtcattgagt
acagtagatcgtgtttgtatagaaggttggagaagtggaatggttgaagaaggtgtcaga
ccaaacttcacacgaattttcgagagatgtatgaattcttcaaaagagaagtttgagact
attgttgcgagaagagaagatactgaaggattgagagtttttaagaacatcgaaaaactg
gaagaaatttctataaaaacaatcgaaagagccacgaactcaaatcatttctctactaaa
gctgtgagaagcccatcagaaaacagtttagtctctattgaagcttgctcaaaaatcgat
ttctcgaatcctgattgtcttcgatggattccagcagttcctctcaaaaccttgttagct
ttagctgttttcacaattggaaagaaggcggttattcaaataatatctgcggatcatcaa
tggattgcaaaacggatgaaaccacaagattggtgttcgattgtagttatcggagcaaga
gaattcgtgttcaaagatttgttgggtggaaagacaatagcttccgtctttgattctgtc
ggcgcttctgaatgggtgactccccgaaaaaagaaaaatgctccaatcccttcacgaaaa
atgtcccccatttcgataaattcaacacaaagttcgggaaattctacggcaacgattact
agttggatagttgataccaatggaaaatgcccaatgtgtacgttgccaataaagatgatt
gtcggtaaaacggatcggggtgttatctcatatttctgtggccacgtatttcataagatg
tgtctggctgatcgatatactacgggatgtatagcatgtcaatctaaagcacgaaaggct
gttatggctgcaagatctggatcatcagccacttctacaccaaccgcctctccaattatg
tcgccacgtcaccaaagagtgggatag
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