Caenorhabditis remanei (nematode): GCK72_001850 Help Entry GCK72_001850      CDS       T09085                                  Name (RefSeq) hypothetical protein   KO K08873   serine/threonine-protein kinase SMG1 [EC:2.7.11.1] Organism crq  Caenorhabditis remanei (nematode) Pathway crq03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:crq00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     GCK72_001850  09180 Brite Hierarchies   09181 Protein families: metabolism    01001 Protein kinases [BR:crq01001]     GCK72_001850   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:crq03019]     GCK72_001850 Enzymes [BR:crq01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.11  Protein-serine/threonine kinases     2.7.11.1  non-specific serine/threonine protein kinase      GCK72_001850 Protein kinases [BR:crq01001]  Serine/threonine kinases: Other   PIKK family [OT]    GCK72_001850 Messenger RNA biogenesis [BR:crq03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Other surveillance factors      GCK72_001850    mRNA cycle factors     Common to processing body (P body) and stress granule      GCK72_001850 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PI3_PI4_kinase SMG1 FATC HEAT_ATR FRB_dom DUF5864 Motif Other DBs NCBI-GeneID:  9819193 NCBI-ProteinID:  XP_053591796 UniProt:  A0A6A5HUW3 LinkDB All DBs Position I:8979017..8989809 Genome browser AA seq 2323 aa AA seqDB search MITSKNNDIGNLIEQFRQRDTHQKERKAILVRIEEILQNVNNLEDANVKWMYVLDSVCWP VLTKFDRFEFKTYAGRILRHIGTLLFDSTAYPEFLIWLGTLYQSLPKKSDEVRADIVYSV YYVVGAISQKAENRRISEYDEEHVRKSLEWVIQVLPNASISVHNQCLKGIVLVSNTFPKV SNNSFEPIISAILTNLPDFNSHEKNFERLIDTVTLFSDQFSKNLEFSEEMVRLIRPDIKK NGLRNLKELKKRIKLTMAVVKMAKSQQMLEDTNQMISELSVEFEENGGKWSSASLITVVC DIFNELLIIGKDDEKMRKGVEESLGHVLKDLNLSKQNTKEKQAFFNSLAKIVKQLPAESP IKTKIHQIVFNQETGLFTTKNKDIRIFGHNTIYKDLVNLISVLLTPTSLNHLQATYTDLR KAMMASMSRLKRSEEKPHSDSVRWHESILLLFFSALQGISCAKSSLIVMMGIRPSIFEFF STELPLTEYWLASNHPEVYHLFVTILVGHLKAHDFYIAQSDYLVRGDNSIGQSIGQTKRE YARKQVIALQKIIANFGDKLLKRTRVLISSWLHGLVLAASDQKIGSESFSQREWVRLRST VVHQSVLSWNNESTNQALTLLSAATKWPELTLDIDRDITDKTKKAKWKEATTIWEAGDCK IYIRQSMAPIYQMCQEKQQKLITATSFGAEEFNIVTNFLLKQIVPSTFKKGSYVWMDEVL ETVIQGCQSISQEKTENLLPETFMEKWDWIINQTANFCIVNKMKTPLGKPMQTFAAFENE LKRLAKDVLNRKNNEKKSKDETIPPSSPPLKYSIQWLRVNLLLKLIEVLEKLMISAIYGG SSVFNLTEIPVTSRQFFSMNSASCEVWLNRVYYPALVVAYFNGYYGLVIRFGSNALTHYA KQKSSDEKVIVNGVCTACLMSLSMAVLGEPMEIVGLRRRVREEFGTEMGQQLMEALGEMA RARYEIALAALETILVTDASLNETLKIIIQIAMTDMLNRIRLPEAVDYYKTTLFGSDPDA PITEDFRSIEMLTKFEKISNAVNEKRQVVDWSARERLQVVESAFSQTMRRTELLDLQKEL SAMGALTLSADTSCKLYSDISSTSIIVANLVDRMTGVSQWKNQLTDGEMFDKTEEGNEGD KLAICRKLMHWGRHIKHYRGQSSAAHGEIIRLSRKTDNCELAFFHINSVIRGDKLNAWQR LEVERQRLKLVKLQNLPVRIREMNAVFKSLADVFMTSMQLKSNFQFQDVSIKEKMLSEGY LSEIAKREEHMSRASIQIADFFQSLLPAVDNVLTPNLFETMIWSEIHARSNNMACGYPGI VGALFHLAAEMCPTLAKSHLKLAKWAYEMAKIENSPDINLCTIYQFGQTPQENEELWKCL EATSLVNLEKQVRKVIPDVMRANALISPNSHYLLIWERTSAHRRKFLSITVSSYFQFIHN MSGEFDNLPYSKKEETTLATLRILELLVKHGEVLIDVINDGLSKTNVHVWKEILPQLFAR LSHPSEHIRKTLVDLISRVCTAAPHAVVFQVVSGAASSTEVGEELEEQQNDDRNRVRVCC EQLETKMAQSYPSLVRDVRLFVAELERINLLNEEKWSVVLGTMEHEMEKRLALIKSENMK TEMAMHLMPAMKDEIIENKTKLLTRQIFDVLDELYQQTIMEPAKTKNEEEFVTAFIEILS NAHHESKKNRAMSPEQSWAPFKNLIANFVHRNIKKGMQLLKTADISPYLAALSNSCVPMP GQESVEFDRVVSIARVSDQVTILPTKTRPKKLGFVGSDGKHVAFLFKGREDLHLDERVMQ FLRLCNVMLQPGKSKNRQIAEYQAHHYAVIPLGPRSGLIKWVEGATPIFHIYRKWQMKEK ALKQATKKNGETVPDIERPSNMYHNMMRQAFTAHNIDATIASDRTKWPVHIVEEVFEGLS SKTPTDLISRELWMRASDATSWWAVTKRYARSLAVMSMIGSVLGLGDRHLDNLLVDLKYG HVVHIDYNICFDKGKNLRIPETVPFRLSRNMRHALGPSEMYGTFRESCVHVLSTLRSGHQ VLTMLLDAFVFDPLVDWTSHEHTSTSGISLALQLAVYGSNWKAKSRDRLTDTIELFQLRM TENHSLWMNNRDDLLRWMKQVTECLLMEKNLMGANGLYAQQRVQAGTELREAITRHQTLT KEIRPLIRAIGKEREEFADYFKFYKQAFIDPLLKGHSALRHEVDVDTCVHNFNIVMQNID VVFVSLISLSSMPVESIISRAPQPQHFKPPPGLENVWVVKQDQQENSQAREVVRRVERRL NGWLDGSAPDRKLSPREEADVLIAEATSNANLAQMYEGWTAWV NT seq 6972 nt NT seq  +upstreamnt  +downstreamnt atgataacatcgaaaaacaatgatattgggaacctgattgaacagtttcgtcaacgtgac actcatcaaaaggaacgaaaagcgattcttgtgagaatcgaggaaattcttcaaaatgtc aataatttggaggatgctaatgtgaaatggatgtatgttttggatagcgtatgctggccg gtcctcacgaaattcgatcgattcgagtttaaaacatacgctggaagaattctgagacat attggaacacttctctttgattctaccgcttatccagaattcctcatttggctcggaacc ctctatcagagtttaccgaaaaaatccgacgaagtacgtgcagacatagtttattccgta tactatgtagtgggagctatcagtcaaaaagctgaaaatcgacggatctctgaatatgat gaagagcacgtccgaaaatcattggaatgggtgattcaagttcttccaaatgcatcaata tcagtacataatcaatgtttaaaaggaattgttcttgtttcgaatacattcccaaaagtt tccaataattcattcgagccaataatcagtgctattcttacaaatctacctgatttcaac agtcatgagaaaaacttcgagcgtctcatcgacacagtaactctgttttccgatcaattc tcgaaaaatctggaattctctgaggaaatggtgcgactgatccgaccggatataaaaaag aatgggttacgaaatctgaaagagttaaagaaacgaataaaattgacgatggctgttgtg aaaatggcaaaaagtcaacagatgctcgaggacactaatcaaatgatctctgaattgtct gtcgaattcgaggaaaatggtggaaagtggtcatcagccagtctcataacagtcgtttgt gacatatttaatgagcttctcattattggaaaagacgatgaaaaaatgcgaaaaggagtt gaagaatcgttgggtcatgtgttaaaagatttgaacttgtcaaaacagaatacaaaagaa aaacaagcttttttcaattctttagcgaagattgtcaagcaacttcctgctgaatctcca atcaaaacgaaaattcatcaaattgttttcaatcaggagactggtctttttactacaaaa aataaggacattcgaatttttggacataacaccatttacaaagacctcgtcaatttgatt tctgttcttctcactccaacttctctaaatcatcttcaagcaacttataccgacttgaga aaagcaatgatggcgagtatgtcacgtctgaaacgtagcgaagaaaaaccgcatagtgat agtgtcagatggcatgaatcaattctcttgctctttttctctgcactacaaggaatatcg tgtgcgaagagttcactcatcgtgatgatgggaattcgtccgtctatttttgaattcttt tcaactgaattgccactgacggaatattggcttgcttcaaaccatccagaagtttaccat cttttcgttaccattcttgtcggacacttgaaagcccatgatttctacattgctcaatcc gattatcttgttcgtggagacaattcgatcggacaaagtataggacagacaaagcgagag tatgccagaaaacaagtcattgctctgcagaaaattattgcgaacttcggagataaatta cttaaaagaacaagagtgttgatctcctcttggcttcatggccttgttctcgctgcttcc gatcaaaaaatcggttctgaaagtttcagtcaaagagaatgggttcgattgagaagtacg gttgtccatcaatcagtcctgagctggaataacgaaagtactaatcaagccttgactctt ctttcggcagctacgaaatggccagagctcactcttgacatcgacagagatataactgac aaaacgaaaaaagccaagtggaaagaagcaacaacgatttgggaggcaggagattgcaag atttatatcagacaaagtatggcaccaatctaccaaatgtgtcaggaaaaacaacagaaa ctaataacagcgacgagttttggagcagaagaattcaatattgtcactaatttcttgctg aaacagattgttccgagtacttttaaaaaaggatcgtatgtttggatggatgaagtgctc gaaacagtaattcaaggatgtcagagtatttcacaagagaaaactgaaaacttattgccg gaaacattcatggaaaagtgggattggattatcaatcaaactgccaacttctgcattgtc aacaaaatgaaaacaccgttgggtaaaccaatgcagacattcgcagcttttgagaacgaa ctgaaacgacttgcaaaagacgttttgaatcgtaagaacaatgaaaagaagtcaaaagac gaaacaattcctccgtcatctcctccattgaaatattctattcaatggctccgagtaaat cttcttttgaaactgattgaagttttggaaaagttaatgatttctgctatctacggagga tcttcagtattcaatttgactgaaatcccagtcacatctcgccaattcttctcaatgaac tcggcaagttgtgaagtttggctcaatcgagtttattatccagcattggttgttgcatat ttcaatggatattatggattggttattcgttttggatccaatgcactaacgcattatgca aaacaaaagagctcagatgagaaagttattgtaaatggggtttgtacggcgtgtctaatg tctttatcgatggcagttcttggtgagccaatggaaattgttggactgagaaggagagtt cgagaagaatttggaacagaaatgggacaacaattgatggaagcattgggagaaatggca cgggcgagatacgaaatcgctttggctgctttggaaacaatccttgtgactgatgctagt ttgaacgagacgttgaaaattattatccaaatagcgatgactgacatgttaaatcgtatt cgacttccagaagcagtagattattataagactacactttttggcagtgatccagatgca ccgattacagaagatttccgatcaatcgaaatgctcaccaagttcgaaaaaattagcaat gccgtgaacgagaaaagacaagttgttgattggagtgctcgtgaacgtcttcaagttgtt gagtcggcgttttcgcaaacaatgagaagaactgagctcctcgatctccaaaaagagctc tccgctatgggagctctcacattgagcgctgacacttcatgtaaactatattccgatatc tcatccacttccatcatcgttgctaatcttgtcgatcgaatgactggagtttcacagtgg aaaaatcaattgacggatggagaaatgtttgataaaacagaagaaggcaacgaaggagat aaattagcaatatgtcgaaagctgatgcattggggacgacacataaaacattaccgaggc caatcaagtgctgcacatggtgagataatacgtttatctcgtaaaactgacaattgtgaa ctcgcattcttccacataaactcagtgattcgaggagacaaattgaatgcgtggcaacgt ttagaagtggaaagacagcgactgaaactggtaaaattacaaaatcttcctgttcgaatt cgagagatgaacgcagttttcaaatcgttggctgatgtttttatgactagcatgcagctg aaatcgaatttccaatttcaagatgtttctattaaagagaaaatgttatccgaaggttac ttgtccgaaattgcgaaacgagaagagcatatgagcagagccagcattcaaattgctgac tttttccaatcactcctccctgcagttgacaatgttctcactccgaatctctttgaaacg atgatatggtctgaaatacacgctcgctccaataacatggcgtgtggatatcctggaatc gttggtgctctattccatttggcggctgaaatgtgtccgactctggctaagtctcacctg aaattggcaaaatgggcatatgagatggctaaaatagaaaactcacctgatataaatctg tgtacaatctaccaattcggtcagactccacaagaaaatgaggaattgtggaagtgtttg gaggctacgagccttgtgaatttggagaaacaagtcagaaaagttattccggatgtgatg agagccaatgctctcatttctccaaacagccactatcttctcatatgggaacgaactagc gctcatcgtagaaagttcctttcgatcaccgtctcatcgtatttccaattcattcacaac atgtcaggagagtttgacaacttaccatactcgaaaaaggaagagacaacacttgcaact ctgagaattctagagctgctggtaaagcatggagaagttttgattgatgtaataaatgat ggattgagtaaaacaaacgttcatgtttggaaagaaattcttccacaactattcgcccgc ctatcccacccatctgaacatattcgcaaaactcttgttgatctaatttctcgtgtctgc actgctgcaccacatgcagtcgtttttcaagttgtttctggagcagcttcatccacagaa gttggtgaagaacttgaagaacaacagaatgatgatcgtaaccgtgttcgtgtttgttgt gaacaactcgaaacaaaaatggctcaatcatatccaagtcttgtccgcgatgttcgtctg tttgttgcagaactcgagcgtatcaatttattgaatgaagaaaagtggtctgtggtgttg ggtacaatggaacatgaaatggagaagagattggcgttaataaaatctgagaatatgaag actgaaatggcaatgcacttgatgccagctatgaaggatgagatcattgaaaataagaca aagttattaaccagacagatcttcgatgtacttgatgaactctatcaacaaactattatg gaaccggcaaaaactaaaaatgaagaggaatttgtcactgcatttattgaaatcctttcg aacgctcatcacgaatccaagaaaaatcgcgccatgtcaccggaacaatcatgggcgcca ttcaaaaatcttattgcgaatttcgtacatagaaacatcaaaaaaggaatgcaactgttg aaaactgccgatatttctccatatttggcggcgctcagcaactcatgtgtccctatgcct ggccaagaatctgtcgaatttgatagagttgtttcgattgctcgtgtctcagatcaagtt acgattcttcctaccaaaacaagaccaaagaaactcggatttgttggatcagacggaaaa catgttgcattcctattcaaaggccgtgaggatcttcatctcgatgagcgtgttatgcaa ttccttcgtttatgcaacgtcatgcttcaaccgggaaaatcgaagaaccgccaaattgct gaatatcaagcacatcactacgcagtaattccacttggaccacgttctggattaatcaaa tgggttgaaggagcaactcccattttccatatatacaggaagtggcagatgaaagagaaa gcgctgaaacaggcaaccaaaaagaatggtgagacagttcctgatatagagaggcccagc aatatgtatcataacatgatgagacaagcattcacagctcataacatcgacgccacaatt gcttctgatcgtacgaaatggcctgtccacattgtcgaagaagttttcgagggcctcagc tcaaaaacacccacagatttgataagccgggaactgtggatgcgtgcaagtgatgccaca tcgtggtgggcagtgaccaaaagatatgcaagatcattggctgttatgagtatgatcgga tcagttttgggactcggtgatcgacatttggataatttattagttgatttgaaatatgga catgttgtccatattgattacaacatctgctttgacaagggaaagaatctacgaatccca gaaacagttccattccgtttgtctcgcaacatgagacacgctctcggtccgtctgaaatg tacggaacattccgtgaatcgtgtgttcatgttctgtcaactctccgttctggtcatcaa gtactgacaatgcttcttgatgcatttgtatttgatccacttgttgattggacatcacac gaacatacatcaacatcaggaatctcattggcacttcaattagcagtttatggaagtaat tggaaagcaaaatcacgagacagattgactgatacaatcgagttgttccaattgagaatg acagaaaatcattcactttggatgaataatcgcgacgatcttctccgttggatgaaacaa gtaaccgaatgtcttctaatggagaagaatttgatgggtgcaaacggattgtatgctcaa caacgtgttcaagcaggaacagaacttcgcgaggctatcacacgtcatcagactctcacg aaggaaattcgtccattgatacgagcaattggaaaagaaagagaggaattcgcggattac tttaagttctacaagcaggcgtttatagatccactgttgaaaggacattcggctctccgt catgaagtggatgttgatacctgtgtgcataatttcaatatagtcatgcaaaacatcgat gttgtatttgtctctctaataagtctatcctcaatgccagtcgaatcaataatttctcgt gctccacaaccacaacatttcaaaccaccacctggtcttgaaaatgtatgggttgtgaaa caggatcaacaagaaaattcacaagctcgtgaagtggttcgacgtgtcgaaagacgacta aacggatggcttgatggatcagctcctgatcggaaattgtctccgagagaagaggctgat gttttgatcgccgaagcgacatccaacgctaatttggcacaaatgtacgaaggttggact gcttgggtctga

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