Caenorhabditis remanei (nematode): GCK72_001981
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Entry
GCK72_001981 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crq01002
]
GCK72_001981
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crq04121
]
GCK72_001981
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crq04147
]
GCK72_001981
Enzymes [BR:
crq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
GCK72_001981
Peptidases and inhibitors [BR:
crq01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
GCK72_001981
Ubiquitin system [BR:
crq04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
GCK72_001981
Exosome [BR:
crq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GCK72_001981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
zf-UBP
UBA_7
UCH_1
PolC_DP2_central
UBA
Motif
Other DBs
NCBI-GeneID:
9815385
NCBI-ProteinID:
XP_053591859
UniProt:
A0A6A5HV71
LinkDB
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Position
I:complement(9466642..9470732)
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AA seq
770 aa
AA seq
DB search
MDVESVVRTAVESGVFTKPSADQKVFKDQCAYCFKDPHTKDGLYINLKNYHAFCREHAEI
YANNTGNNLYVQFESTKVFVEEKVDGERADGEPTNKMTKLTIDADPKFEFEDKYCVVIHP
NYSQQFFNVQGVQEIADAIQTIANSTSAERLALLSSTSNAWDADIKLITKHSNLVQHDND
KRLALSGWHCEVENCGLDENLWINLTDGAIRCGRSQYVADGQKTNGNGHMQDYYAATGYP
LVVKLGTISSNLESIDVYSYDEDDAVIDPNLEKHLKHFGLDPSKLEKTAKSTLEMELDMN
EKWEWARCTEDGAVLEPVYGPGYTGLINTGSSCYMNSVLQALIQVDSFRTRYSEKALDIL
LNCPIETIHNDFNAQFAKVIRAMLSGDYSSETDLEHNNIKPLQFKRVAAGNHAEFSTAKQ
QDVEEYIRFLFEKISQNSKDEVIDPTGSLRFQTWNRFEDIATQKVRYTEQEELILRLPIP
EALLKPIPDTENRFTVDMSAAIQAAFDVQFGYKSPITGEQKGATNTITMKTFPDYLLFQV
SKFTYNNLGVQKKLDVEVEVSDELDLVAYRGHGKLEGEELLPVETPSEPAAPEIPANVRA
VAGELMVATNWLMEHMDEPNINDVFVMPTGTPSARGEVDPNLVASIIDMGFTPYQARYAL
KQVPTVSEAVDWLFTNMETIPVETAATGSSSDAPQPSITEAANRKSYKDGSEKYKLIGMI
SHMGSRPDSGHYVAHMLKDGKWVLFNDEKVALSQDPPKKLAYIYLYKRVE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgaaagcgtcgtacgcaccgcagttgagtcaggcgtcttcacgaagccttca
gcggatcaaaaagtttttaaggatcaatgcgcttactgcttcaaggaccctcatactaaa
gacggtctttacatcaatctcaagaattatcatgctttctgcagagagcatgcggaaatc
tatgcgaataacactggaaataatctttatgtgcagtttgaatcaaccaaggttttcgtt
gaagagaaagtggatggtgaacgagctgatggcgagccaacgaacaaaatgacgaagctc
acaattgatgctgatccaaagttcgagtttgaggacaaatactgtgtcgtaattcatccg
aactactcgcaacagtttttcaatgttcaaggagtgcaagaaattgcagacgcaattcaa
acaattgctaactcaacaagcgctgagcgtttggcgcttctgtcatctaccagtaacgct
tgggatgctgatattaaactcatcacaaaacattctaatctagtccaacatgataacgat
aaaaggcttgctctctcaggatggcattgtgaagttgaaaattgcggactggatgaaaat
ctgtggatcaatttgacagacggagctattcggtgtggacgtagtcagtacgttgcggac
ggacagaagactaacggaaacggtcatatgcaagactattatgctgctacgggatatcca
ctcgttgtgaaacttggaacaatttcttcgaaccttgaatcaattgacgtctacagttac
gatgaagacgatgctgttattgatccgaatttagagaagcatctaaaacacttcggtctt
gatccctccaaactcgagaaaacagccaaaagtacacttgagatggaattggacatgaat
gagaagtgggaatgggctcggtgcactgaagatggtgctgttttggaaccagtttatggg
ccagggtacacaggactcattaacactggaagcagctgctatatgaactcggtactccaa
gctcttattcaagtcgactcattccgtactcgatacagcgaaaaagctcttgatattctg
ttaaattgtcctatcgaaacgatccacaatgacttcaacgctcaattcgcaaaagtgatt
cgtgctatgctcagcggagactattcttccgaaactgatcttgagcacaataacattaag
ccactgcaattcaaacgggtcgctgcaggaaaccatgctgaattttcaactgctaagcaa
caagacgtcgaagagtatattagattccttttcgagaaaatctctcagaactcgaaagac
gaagtaatcgatccaacgggttctttgagatttcagacatggaatcgttttgaagatatt
gctactcaaaaagttcgttataccgaacaagaagagctaatccttcgtttgccgattcca
gaggcacttctcaagcctattccggacacggaaaaccgtttcacggttgatatgagtgcc
gcaattcaagctgcatttgatgtgcaattcggatacaaatcccctatcaccggagagcag
aagggagccacaaataccatcacgatgaagactttcccagattatcttctctttcaagtt
tcgaagttcacgtacaacaatcttggtgtacagaaaaaacttgatgtagaagtcgaagtc
agtgatgaactcgatctagttgcgtatcgtgggcacggaaagctggaaggcgaggaatta
cttcctgtcgaaactccatccgagccagctgccccagaaattccagccaatgttcgtgca
gttgctggagagctgatggtggctacaaactggttgatggagcatatggacgagccaaac
attaatgacgtctttgtcatgccgacaggaacaccatctgctcgtggagaagttgatccg
aatctggtggcatcgattattgacatgggattcacgccttatcaggctagatatgcactg
aaacaagttccaactgtttctgaggcagtcgactggcttttcaccaatatggaaactatc
ccagtcgagacagcggccaccggatctagttcagatgctccacaaccatcgatcactgaa
gcagcgaataggaaatcttataaagatggatccgaaaaatacaagttgatcggaatgatc
tcacacatgggatctcgcccggactctgggcattatgttgctcatatgctcaaagacgga
aaatgggttctcttcaacgacgaaaaagtggctctctcacaagatccaccaaagaagttg
gcctacatctatctttacaaacgtgtcgaataa
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