Caenorhabditis remanei (nematode): GCK72_002008
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Entry
GCK72_002008 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05655
ATP-binding cassette, subfamily B (MDR/TAP), member 8
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GCK72_002008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crq02000
]
GCK72_002008
Transporters [BR:
crq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
GCK72_002008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Tad
AAA
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_25
APS_kinase
DUF1580
Motif
Other DBs
NCBI-GeneID:
9815668
NCBI-ProteinID:
XP_003114728
UniProt:
A0A6A5HPP5
E3LMD8
LinkDB
All DBs
Position
I:complement(9582516..9585498)
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AA seq
668 aa
AA seq
DB search
MAILSKISRISFKSLAQNCKNSYTTLRWMQKPISRSTILKTWRICGFGTGLAAITFRKAS
CAPKISSKRIDHLRKEDQNASMTMWELWELIRPFFGWFFAAVVCAILSAYINIQIPLCLG
DLVNGIVGIIKDETKNLRSHFEQLKPSAMHLMTMYVAQSALTFLYITFLTILGERMATKM
RSDLFAKLLHHDMAFFDSHKTGELSARLNADVQEFKSSFKLCVSQGLRTFAQTIGCIGSL
YFLSPTMTMYTVAVVPGIILAGSAIGAGLRQLSRRAQAQSATASAVSDEALTNMRTIRAF
AMEKLESRLFDSELDKARSMQEQLGIGIGIFQAGTNLFLNGMILSVLYGGSNLISKGEMT
PGALMSFLVSAQTIQRSLSQLSIIFGTAIKGWTAGGRVLEFSRLEPSIPIDTGVCIPYHT
LWGDIKFEDVSFSYPTRPGHNVFEHLTLTIPAGQVVALCGPSGEGKSTITHLLERFYEPK
SGRVTLDGRDMKELNVEWLRGQVIGLISQEPVLFATSVEENIRYGRPDATDEEVRDAARA
AHVDEFVSRFPNGYSTVVGERGAQLSGGQKQRIAIARAILKNPPILILDEATSALDSQSE
QLVQEALNNVMKGRTVLVIAHRLSTIRSAQLIYVIKDKKALESGTHEQLMAKKGSLYRKL
VEAHNVDS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggctattctatccaagatttcacggatatcgttcaaaagtttagcacagaactgcaaa
aattcatacacaactctccgatggatgcaaaaaccgatttcccgatcaactattctcaaa
acatggcgaatctgtgggttcggaactggcttggcagcgataacattcaggaaggcgtcc
tgtgctccgaaaataagcagcaaaaggattgaccatttgaggaaagaagatcaaaatgcg
tcaatgaccatgtgggagctctgggagctcattaggccgtttttcggatggtttttcgct
gcagttgtgtgcgcaattctctcggcttacatcaatattcaaattccactctgtttgggt
gacttggtaaacggaattgttggaataatcaaagacgaaacaaaaaatcttcgctctcat
tttgagcaactcaaaccatcagcaatgcatttgatgacaatgtacgtggctcagtcagca
cttacttttctgtatattacgttcttaacgatcctcggagaacgaatggcaacaaaaatg
agatcggatttattcgcgaaattgcttcatcacgatatggcgtttttcgattctcataaa
accggagagctctccgcccgattaaacgctgatgtacaagagttcaaaagttcgttcaaa
ttgtgtgtgagtcaagggctgcgaacatttgctcaaacaattggctgtattggatctctc
tatttcttatctcctaccatgacaatgtatactgtagctgttgttccgggtattattttg
gctggaagtgcaattggagctggattaagacaactgagcaggagagcccaagctcaatct
gccacagcatcagcagtatccgatgaagctctcaccaatatgagaacaatccgagcgttt
gcaatggaaaaactcgagtcccgattgtttgacagtgaattggataaagcaaggtccatg
caagaacaacttggtattggaattggtattttccaagctggaactaatcttttcttgaat
ggaatgattctatcagttctttatggtggatcaaatctaatttcaaaaggagaaatgact
ccaggagcattgatgagtttccttgtttctgctcaaactattcaacgatctctttctcaa
ttgtctataatctttggaactgcaatcaagggatggactgccggtggaagagttcttgaa
ttctctcgattggaaccgtcaattccaattgatactggagtttgtattccatatcatact
ctttggggagatattaaatttgaagatgtttcattttcatatccaacaagaccagggcat
aatgtttttgagcatttgacattaacgattcccgctggacaagttgtagcactttgtggg
ccaagtggagaaggaaaaagtaccatcactcatcttcttgagcgattctatgagccaaaa
tcaggaagagtaactctggatggacgagatatgaaagaattgaatgtagaatggcttcgt
ggacaagtcatcggactcatctctcaggaacctgttctgtttgccacgtcagtggaagaa
aatattagatacggacggccagatgctacggatgaagaggtgcgcgatgctgctcgagct
gctcacgtagatgagtttgtctccagattccctaacggatattcaactgttgttggtgaa
cgtggagcacagctttctggcggccaaaaacaacggatcgcaatcgctcgtgcgattctg
aaaaatccccctattttgattctggatgaggcaacatctgcattagattcccaatcagaa
cagcttgttcaagaagcgttgaataatgtgatgaaaggaagaactgtgttagtaattgca
cacagattgagcacaattagatctgctcaactaatttatgtcattaaagataagaaggcc
ttggagagtggaacccatgagcaattaatggcaaagaagggctcattgtatagaaaattg
gtagaagcacataatgttgattcatag
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