KEGG   Caenorhabditis remanei (nematode): GCK72_002200
Entry
GCK72_002200      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K08735  DNA mismatch repair protein MSH2
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    GCK72_002200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crq03400]
    GCK72_002200
DNA repair and recombination proteins [BR:crq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     GCK72_002200
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I Chitin_synth_1
Other DBs
NCBI-GeneID: 9809300
NCBI-ProteinID: XP_053591955
UniProt: A0A6A5HWX1
LinkDB
Position
I:10239858..10243234
AA seq 849 aa
MSGGKDEVSDKALLKLLQAKSPNTIAIFSRGEYFTVYGEDANFVATNIFKSDVCVKTFTL
CTTESQQMKYISVNRGQYEKVVRETVVLLRCSVELYASEQGEWKMIKRGSPGNTVEFEQE
IGVSDQAPVLAVYIHPGEDDNRVTLCAWDSGNVRLVTSEFIDTPSFSQIEQCIFGLCPTE
YYLINGVLASPRIKKLSNVFTKMDVHCMQALKTKSEWQNILDCIHEDYREEAEKQSNSVK
ECLQTLHANVADEYRNSEKYSIFNYGTHGNMQIDSCAVDALELFQLNYNYLEKSNNLTLY
NVLNKCKTLPGEKLLRDWLSRPLCNIDHINERLDVVESLLENQNVRQKLRDSFLARMPDC
SQLARRLMRKCTLQDLNRFYQAATLLESVEMQLIQLSEDKRFSASIDRLLKSEVTAILKK
VERFQVLCDEFFDFDYEKEHKEIRVRVDFVPEIQEISEKLDQVDKIAEKLRKKYSAKFEC
DSMKLDKNSQYGYYFRVTLKEEKSIRKKDVHILETTKGSGVKFTVGELSDINDEFLEFHL
KYTRAEEEVITMLCNKAEEFIPLIPAMAQLIATLDVFVSLATFSSMSSGIYSRPELLPLG
SKLLELKQCRHPVIESISEKPFIPNDVILEKNRLIILTGANMGGKSTYLRSAALSILLAQ
IGCFVPCSSAKISVVDGIFTRVGASDKQSQGISTFMAEMLDCSAILQRATENSFVVIDEL
GRGTSTFDGFGIASAIAQDILNRIRCLSVFATHFHEMGKLAEQPGAVALQMGVQIEKNQI
HMLYKVSEGVAQCSFGLKVAKMVGLDESVIKKASELLEGLEKKVIIDNDKKKELLESSDI
RQAILQLVN
NT seq 2550 nt   +upstreamnt  +downstreamnt
atgagtggcggaaaagatgaagttagtgacaaagctctattgaaactgctgcaagcaaaa
tcgcccaacaccatcgccattttctctcgaggggaatacttcacagtttacggagaagat
gctaacttcgtggcaactaacatttttaaaagcgatgtttgtgtcaagacttttacacta
tgcactactgaatctcaacaaatgaaatatatttctgtgaatcgtggacagtatgagaaa
gttgttcgcgaaacagttgtactgcttaggtgctccgtagagctttatgcgagtgaacaa
ggagaatggaaaatgatcaaacgtggatctcccggtaataccgttgagttcgaacaagaa
attggagtgtcagatcaagcaccagtccttgcagtatatattcaccctggagaggatgat
aatagagttaccttgtgtgcctgggattccggtaacgtacggttggttacaagcgagttt
attgacactccgagcttctcacaaatcgagcaatgcatcttcggattgtgtccaactgag
tattatctcatcaatggggttctcgctagtccaagaatcaaaaaactgtccaatgtgttc
acaaaaatggacgttcactgtatgcaagcattgaagacgaaatcagaatggcagaatatt
ctcgattgtattcatgaagactacagagaggaagcagaaaagcaaagcaattctgttaag
gagtgtctccagacgttgcatgcaaacgtagctgatgagtatcgtaactctgaaaagtac
agcattttcaattacggaacacatggtaacatgcaaatcgactcttgcgctgtcgacgct
ttagagctattccaactcaattataactacttggagaaatctaacaatttgacactttac
aatgttctcaacaaatgtaaaacgcttccgggagagaaacttctcagagattggctttcc
cgtcccctttgtaatatcgatcatatcaacgaacgtcttgatgtcgtcgaatcattgttg
gaaaatcagaatgttcgtcagaaactccgtgactcatttcttgcaagaatgccagattgt
tctcaactggctcgtcgacttatgagaaagtgtacacttcaggatcttaatcgtttttat
caagcagctactcttttggaaagtgttgaaatgcagctgatacaactttcagaagacaaa
agattttccgcttctatcgaccgtcttttgaaatccgaggttaccgcaatcctgaagaag
gtggaacgcttccaagttctctgtgacgagttcttcgactttgattatgagaaagaacat
aaagaaattcgtgttcgtgtcgatttcgtacctgaaattcaagaaatcagcgagaaattg
gaccaagttgataagattgctgagaagttgcgcaagaaatattctgcaaaatttgaatgc
gacagtatgaaactggataaaaattctcaatacggatactacttcagagttactttgaag
gaggaaaaatctattcgcaaaaaagatgtgcatattctggaaactaccaaagggagtgga
gtgaagtttactgtcggagagctcagtgatataaatgacgagtttctcgagtttcatttg
aaatatactcgagccgaagaagaagttatcacaatgttgtgcaataaagcagaagaattt
attccgttaattcctgcgatggctcaactcattgcaactcttgatgttttcgtttcttta
gcaaccttctcttccatgtcttcgggtatttacagtagaccggaactgctaccacttgga
tcaaaactcctcgaactgaaacagtgtagacatccagtcattgagagcattagcgagaaa
ccattcattccgaacgatgtgattctggagaaaaatcgtctaatcattctgaccggtgct
aacatgggcggcaaaagtacatatcttcgttcggcggctctttccattcttctcgctcaa
attggatgttttgtcccatgcagttccgcgaaaatctcagtagtagatggtatttttact
cgcgtgggagcatctgataaacaatcccagggaatttcaacatttatggctgaaatgctc
gattgttctgctatccttcaacgcgctacggagaattcgttcgttgtaattgacgagctt
ggacgaggaacgtcgaccttcgacggattcggaatcgcttcagctattgcgcaagatatt
ctgaatcgcatcaggtgtctctcagtcttcgctactcacttccatgaaatgggaaaactc
gctgaacaaccaggagccgttgctcttcaaatgggagttcaaatcgagaaaaatcaaatt
cacatgctttacaaagtttccgaaggtgttgctcaatgttcattcggtctgaaagtggcc
aaaatggtcggacttgatgaaagtgttattaagaaagcttcggagctgcttgaaggactt
gagaagaaagtgatcatcgacaacgacaagaagaaagaactccttgaatcttctgatatc
agacaggcaatccttcaactcgtcaactaa

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