Caenorhabditis remanei (nematode): GCK72_002200
Help
Entry
GCK72_002200 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GCK72_002200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_002200
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GCK72_002200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
Chitin_synth_1
Motif
Other DBs
NCBI-GeneID:
9809300
NCBI-ProteinID:
XP_053591955
UniProt:
A0A6A5HWX1
LinkDB
All DBs
Position
I:10239858..10243234
Genome browser
AA seq
849 aa
AA seq
DB search
MSGGKDEVSDKALLKLLQAKSPNTIAIFSRGEYFTVYGEDANFVATNIFKSDVCVKTFTL
CTTESQQMKYISVNRGQYEKVVRETVVLLRCSVELYASEQGEWKMIKRGSPGNTVEFEQE
IGVSDQAPVLAVYIHPGEDDNRVTLCAWDSGNVRLVTSEFIDTPSFSQIEQCIFGLCPTE
YYLINGVLASPRIKKLSNVFTKMDVHCMQALKTKSEWQNILDCIHEDYREEAEKQSNSVK
ECLQTLHANVADEYRNSEKYSIFNYGTHGNMQIDSCAVDALELFQLNYNYLEKSNNLTLY
NVLNKCKTLPGEKLLRDWLSRPLCNIDHINERLDVVESLLENQNVRQKLRDSFLARMPDC
SQLARRLMRKCTLQDLNRFYQAATLLESVEMQLIQLSEDKRFSASIDRLLKSEVTAILKK
VERFQVLCDEFFDFDYEKEHKEIRVRVDFVPEIQEISEKLDQVDKIAEKLRKKYSAKFEC
DSMKLDKNSQYGYYFRVTLKEEKSIRKKDVHILETTKGSGVKFTVGELSDINDEFLEFHL
KYTRAEEEVITMLCNKAEEFIPLIPAMAQLIATLDVFVSLATFSSMSSGIYSRPELLPLG
SKLLELKQCRHPVIESISEKPFIPNDVILEKNRLIILTGANMGGKSTYLRSAALSILLAQ
IGCFVPCSSAKISVVDGIFTRVGASDKQSQGISTFMAEMLDCSAILQRATENSFVVIDEL
GRGTSTFDGFGIASAIAQDILNRIRCLSVFATHFHEMGKLAEQPGAVALQMGVQIEKNQI
HMLYKVSEGVAQCSFGLKVAKMVGLDESVIKKASELLEGLEKKVIIDNDKKKELLESSDI
RQAILQLVN
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcggaaaagatgaagttagtgacaaagctctattgaaactgctgcaagcaaaa
tcgcccaacaccatcgccattttctctcgaggggaatacttcacagtttacggagaagat
gctaacttcgtggcaactaacatttttaaaagcgatgtttgtgtcaagacttttacacta
tgcactactgaatctcaacaaatgaaatatatttctgtgaatcgtggacagtatgagaaa
gttgttcgcgaaacagttgtactgcttaggtgctccgtagagctttatgcgagtgaacaa
ggagaatggaaaatgatcaaacgtggatctcccggtaataccgttgagttcgaacaagaa
attggagtgtcagatcaagcaccagtccttgcagtatatattcaccctggagaggatgat
aatagagttaccttgtgtgcctgggattccggtaacgtacggttggttacaagcgagttt
attgacactccgagcttctcacaaatcgagcaatgcatcttcggattgtgtccaactgag
tattatctcatcaatggggttctcgctagtccaagaatcaaaaaactgtccaatgtgttc
acaaaaatggacgttcactgtatgcaagcattgaagacgaaatcagaatggcagaatatt
ctcgattgtattcatgaagactacagagaggaagcagaaaagcaaagcaattctgttaag
gagtgtctccagacgttgcatgcaaacgtagctgatgagtatcgtaactctgaaaagtac
agcattttcaattacggaacacatggtaacatgcaaatcgactcttgcgctgtcgacgct
ttagagctattccaactcaattataactacttggagaaatctaacaatttgacactttac
aatgttctcaacaaatgtaaaacgcttccgggagagaaacttctcagagattggctttcc
cgtcccctttgtaatatcgatcatatcaacgaacgtcttgatgtcgtcgaatcattgttg
gaaaatcagaatgttcgtcagaaactccgtgactcatttcttgcaagaatgccagattgt
tctcaactggctcgtcgacttatgagaaagtgtacacttcaggatcttaatcgtttttat
caagcagctactcttttggaaagtgttgaaatgcagctgatacaactttcagaagacaaa
agattttccgcttctatcgaccgtcttttgaaatccgaggttaccgcaatcctgaagaag
gtggaacgcttccaagttctctgtgacgagttcttcgactttgattatgagaaagaacat
aaagaaattcgtgttcgtgtcgatttcgtacctgaaattcaagaaatcagcgagaaattg
gaccaagttgataagattgctgagaagttgcgcaagaaatattctgcaaaatttgaatgc
gacagtatgaaactggataaaaattctcaatacggatactacttcagagttactttgaag
gaggaaaaatctattcgcaaaaaagatgtgcatattctggaaactaccaaagggagtgga
gtgaagtttactgtcggagagctcagtgatataaatgacgagtttctcgagtttcatttg
aaatatactcgagccgaagaagaagttatcacaatgttgtgcaataaagcagaagaattt
attccgttaattcctgcgatggctcaactcattgcaactcttgatgttttcgtttcttta
gcaaccttctcttccatgtcttcgggtatttacagtagaccggaactgctaccacttgga
tcaaaactcctcgaactgaaacagtgtagacatccagtcattgagagcattagcgagaaa
ccattcattccgaacgatgtgattctggagaaaaatcgtctaatcattctgaccggtgct
aacatgggcggcaaaagtacatatcttcgttcggcggctctttccattcttctcgctcaa
attggatgttttgtcccatgcagttccgcgaaaatctcagtagtagatggtatttttact
cgcgtgggagcatctgataaacaatcccagggaatttcaacatttatggctgaaatgctc
gattgttctgctatccttcaacgcgctacggagaattcgttcgttgtaattgacgagctt
ggacgaggaacgtcgaccttcgacggattcggaatcgcttcagctattgcgcaagatatt
ctgaatcgcatcaggtgtctctcagtcttcgctactcacttccatgaaatgggaaaactc
gctgaacaaccaggagccgttgctcttcaaatgggagttcaaatcgagaaaaatcaaatt
cacatgctttacaaagtttccgaaggtgttgctcaatgttcattcggtctgaaagtggcc
aaaatggtcggacttgatgaaagtgttattaagaaagcttcggagctgcttgaaggactt
gagaagaaagtgatcatcgacaacgacaagaagaaagaactccttgaatcttctgatatc
agacaggcaatccttcaactcgtcaactaa
DBGET
integrated database retrieval system