Caenorhabditis remanei (nematode): GCK72_002235
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Entry
GCK72_002235 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K27103
serrate RNA effector molecule
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_002235
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
GCK72_002235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
9809132
NCBI-ProteinID:
XP_003104795
UniProt:
E3MGE8
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All DBs
Position
I:complement(10350560..10353146)
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AA seq
711 aa
AA seq
DB search
MMDSDDDGDRRRDKFARERRDDDSYRRNGGGGNYSRYDNKRPAGRRDDYQVKRSRGDEGD
DGFDPVNRGDRSGNGADLPSESESIYSGPLLSFKKFLGNQEDDISEEDASKKYNEYKGEH
KKYQLERFFRAHKEEEWFRLKYKPEEAKKQKEAHLENVQKRLQIFNELREQGQFDKFTLD
FGDAEAIIRMLDSVVVKLENGSDEELKAVLSQKLDDESLADVKKESNGSDKTEEEPAAIV
ETAPKEELEEGAIEDGTEKASNKVNIHKTCSVFLRNIPPGLTYEELENLCKRSPGFLRLA
LTDGIAERRFYRRGWATFKRDVNIKEICWALNAHRLRETDLNAIINRDITRRVRTNNGIA
AHKQVAVNDLKLAVKLTALYDKKIGLFNAADEPENDREMDIRMGVDLVGASTNPVIKEVK
SLVPKDTLNDISEEEAELLGASNGGDAQPEKVRYERDDAILKALDLLIVYLRIVHSIDFY
NHGHYAQEDSMPNRCGLIHVRGQPPSGASITTDEDGTLVVPQKFVNDFISGFNTRIDKGL
IEKQYVSEEELVKMGKKDGEKEVEAFIMKNTVELAKDKWLCPLSGKKFKGPEFIRKHLQS
KHEDKLEEAKAEAEFFNNYLADAQRPVDLEPKQISRDEHRGGGDRGGYGREREDDRGAGG
GRSSFGNGSYERRPQFPPRHSLGGRGGRYFDDAPRRQPVSYRDLDAPDDIP
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgatggattctgatgatgatggtgatcgtcgccgcgacaaatttgctcgagaacgtcga
gacgatgatagttatagacgaaatggtggtggcggaaactattcacgatacgacaacaaa
agaccggctggacgaagagatgattaccaggtgaaaagaagccgtggagatgaaggagac
gatgggttcgatccggtaaatcgtggagaccgttctggtaacggtgctgatttaccgtca
gaatctgaaagtatttattctggtcctttgttatcatttaagaaatttcttggtaatcag
gaagatgatatttctgaggaagatgcgagcaaaaagtataatgaatacaaaggcgaacac
aaaaaatatcaacttgaacggttcttccgtgcacataaagaggaagaatggttccgtctg
aagtacaagccggaagaggcgaaaaagcagaaagaagctcatttggagaatgtgcagaaa
cggttgcaaattttcaatgagcttagagagcaaggacagttcgataaattcactctcgat
ttcggtgatgcagaagcaatcattagaatgcttgattcggttgtggtcaaattggaaaat
ggatctgatgaagaactgaaagctgttctttctcagaaattggatgatgagtcacttgct
gatgtcaaaaaagaaagtaatggatcggacaagaccgaagaagagcctgctgcaattgtg
gaaacagctcccaaagaagaattggaagaaggagcaattgaagacggaactgagaaagct
tctaacaaggtcaacatccacaagacatgctctgtttttctgagaaatattccaccaggt
ttaacttacgaagagctcgagaatctttgcaaaagaagtccaggatttttacgtcttgct
cttactgacggaattgccgaaagaagattctatagacgtgggtgggccactttcaagcga
gacgtcaacattaaagagatttgttgggcactcaacgctcatcgtctacgtgaaactgat
ctgaacgctatcatcaatcgtgatattactcgtcgtgttcgcactaacaacggcattgct
gcgcataaacaagtggctgttaatgatttgaagctggctgttaaattgactgctctttac
gataagaaaatcggactgttcaatgctgctgatgaacctgagaacgatcgcgaaatggac
atccgtatgggagttgacttggtaggagcatcaacaaatccagtaatcaaagaggttaaa
tcacttgttccaaaagatactttgaacgatatcagcgaagaagaggccgagttattggga
gcatcaaacggaggagacgctcaacctgaaaaagtgcgttacgaaagagacgatgctatt
ctcaaagcactagatctgcttatagtgtatctccgtattgttcactctatcgatttctac
aatcatggtcattatgctcaagaggattcaatgcctaacagatgcggtctcattcacgtc
cgtgggcaaccaccttctggagcttcaatcaccacagatgaagatggaacgctcgttgtt
ccacagaagtttgtgaatgactttatctcaggattcaacactcgtatcgacaaaggcttg
atcgagaaacaatatgtcagcgaagaagaactcgttaagatgggcaaaaaagacggcgag
aaagaagttgaggctttcatcatgaagaacacggtcgaattggccaaggacaaatggctg
tgcccactttccggcaagaaattcaaagggccggagttcatccggaaacacttgcagtcg
aaacatgaagacaagctagaagaggccaaagcagaagctgagtttttcaacaattattta
gctgatgcacaaaggcctgtggatctcgaacccaaacaaatttcgagagatgagcatcgt
ggaggtggcgatcgtggcggatatggacgagagcgggaagatgaccgaggcgccggcggt
ggaaggagttcctttggtaatggatcgtatgaacgtcgacctcagtttccacctcgccac
agtctcggcggacgcggtggacgttacttcgatgatgcaccacgccgtcagccggtgtca
taccgggatttggatgctcctgatgacatcccataa
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