Caenorhabditis remanei (nematode): GCK72_002242
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Entry
GCK72_002242 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03440
acid-sensing ion channel, other
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crq04040
]
GCK72_002242
Ion channels [BR:
crq04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
GCK72_002242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASC
FAM76
SCIFF
DUF934
Motif
Other DBs
NCBI-GeneID:
9809255
NCBI-ProteinID:
XP_003104844
UniProt:
E3MGF4
A0A6A5HUT2
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All DBs
Position
I:complement(10368211..10372417)
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AA seq
699 aa
AA seq
DB search
MYIDIPRPSSLPPDTDKEPPPPLSGSDGCEHHDTVRTLRSLKGWGSSTKHLANQLVIEVP
VNSYKHVKKIKGVGSAHRETKHFSSTTTMHGPKRIFYGKGVARAFWVLIVGLALAMLIFQ
IVVLLQMYFSKPTLSQVSFIVNEGGMDFPAVTVCNFNPIKKSYVRELNASGDLTGATLEY
LLQTNMDAMFVFSNLDRNNLKQTHDEAETYFQNHTDFQIIKFLRTAGYDCGEMFLTCYFG
GRRFDCCKYMKQKVTSLGKCWELDLQNLAPEWMRKQISPGSESGLQMIVDAQLEEELRGE
DGDANAIFSDIYENGFRYYIHPPGANAELTSEGISVSPSRTVYSAIKTISHNLLNRKNWG
NCSEHWPERYDTFLSYSASACRALCIAQYFNDTCGCAPFTYNVDGKKKICAPYESITCMD
NHMLRKLNGTDYLELPDCTECHMECQSTSYTSYNSYGDGFNRGSLEWLKKISNKTETHIK
NNVAVINIFFLEMFYTSYSQVQATSLTEILSDIGGNMGMFLGMSVITITELTLFFSKIFW
IMFSKRRRQYMYSKKAHEKEKEQQLDDAVKEFQERRSRRNSRENISALSNYSNRIVPLEE
FQKKFAYKNGNSMDNLSSNSLDSVIELKFDINELRRQLNQQSSDGIARIRLPTQTTRPNS
TNMDNYSSGPPIFTIEPLSRKSSQTPSPPIRGPFYQSSK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcgatattccacgtccttcttctttacctccggatactgataaagagcccccg
ccacctctgtcaggatcagatggatgtgaacatcatgacacagttcggacgttacggtca
ttgaaaggatggggctcttccacgaaacatttggcgaatcaattggttattgaagttcct
gtaaactcatacaaacatgtcaagaaaattaaaggagttggatccgcgcatcgagagacg
aaacacttttcaagtacaactacaatgcacggtccaaaaagaatattttatggaaaaggt
gtcgcgagagcattttgggttcttattgttggacttgctctcgcaatgttgatcttccaa
atagtcgtacttcttcaaatgtacttctcaaaaccaacactttcccaagtgtcattcatt
gtgaacgagggtggaatggactttccagcagtcacagtctgtaatttcaatcccatcaaa
aagtcatacgtacgggaattgaatgcatctggagatttgacaggagctacgttagagtat
cttctacagacaaatatggatgcaatgtttgtcttcagtaacctggatagaaataattta
aaacaaacgcacgatgaggcggagacgtattttcaaaatcacacagattttcaaatcatt
aagtttctgcggactgctggatacgattgcggagaaatgttcttgacttgttacttcgga
ggaagaagattcgattgctgcaaatatatgaaacaaaaagtgacatctctcgggaagtgt
tgggagcttgatctacagaatcttgctccagaatggatgaggaagcaaatatcaccggga
agtgaatcaggacttcagatgattgttgacgctcaattagaagaagaactgagaggagaa
gatggagatgcaaacgcaatattctctgatatctatgaaaatggattcagatattacatt
catccaccaggtgcaaatgctgaattaacttccgaaggaatcagtgtttctccgtcgaga
actgtttattctgctatcaaaacgatttcgcacaacctattgaatcgaaaaaattgggga
aattgttccgaacactggcctgagcgatacgatacattcctctcttactctgcatctgcc
tgtcgagctctctgcattgctcagtatttcaatgacacttgtggatgtgctccgtttact
tataatgttgatggaaagaaaaagatttgtgctccatatgaatcaatcacctgtatggat
aaccatatgcttcgaaaattgaatggaactgattatttggaacttccagactgtacagaa
tgtcatatggaatgtcaaagcaccagttatacatcatacaactcatatggagatggattt
aatcgaggatctctggaatggttgaagaaaatcagtaacaaaacggaaactcatatcaaa
aacaatgtagcagtcattaatatcttctttttggagatgttttatacttcatattcacaa
gttcaagccacttctctcactgaaattttatcagatatcggtggaaacatgggcatgttt
ttgggaatgtcagttatcacaatcaccgagttaacactgtttttctcaaagatcttctgg
ataatgttctcaaaaagaaggagacaatatatgtattccaagaaggcgcatgaaaaagag
aaagaacaacaattggatgatgcagttaaagaatttcaagaaagaagatcgagacgaaat
tcaagagaaaacatttctgctctcagtaactacagtaatcgaatcgttccgttggaagaa
tttcaaaagaaatttgcatataaaaatgggaattcaatggataatctttcgtccaacagc
ttggatagtgtgatagaactaaaattcgacatcaatgagttgcgtcgtcagttgaatcaa
cagtcttccgatggaatcgctcgtattcgtttaccaactcaaacgacccgaccaaactct
acaaatatggataattattcctcaggaccacctatattcacaattgaacccctctccaga
aagtcatctcaaactccatcaccgcctatccgaggacctttttatcaatcttctaaatag
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