KEGG   Caenorhabditis remanei (nematode): GCK72_002308
Entry
GCK72_002308      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K24526  RNA-binding protein 12
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crq03041]
    GCK72_002308
Spliceosome [BR:crq03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    GCK72_002308
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 9809303
NCBI-ProteinID: XP_003104715
UniProt: A0A6A5HS11 E3MG54
LinkDB
Position
I:complement(10704062..10711733)
AA seq 974 aa
MSVIIRLKNLPITAAASDVRTFFSGLKIPDGAVHIIGGDEGEVFVGFASDEDARIAMTRD
RSLIHGAEIRLLLSSKSEQNSVITARKNGTYASPESYEEYVPTAPSQPSAPQAPQSWNSQ
PAPNPYAATSGYEASYPPQNSNAARSNFNNQNNYGSRADMPQLQSPGKPKETFGYGYNNS
YKNTHQQQGPPSHNVNQRFGSNPSSSNPTEPLKSRPTPPVQYQQNQAHQEPPHQNGPHQN
GPNQNQRFSNYGIKGGNHSGNRTNNFHEPGNEAVPGGDSWRDNTYNQPPRNDFKQGYKGD
YNSEYREDFKKDSKSDFNGSNKFNQQLPPRNGPSFDGNPQSNNRFPPQNGRKTLMPTPQV
PFQNAPPAFSSPPQQQGNAVHPGNKPFQNGPPPVMNQQRNIPPIFPNNAAPPMQNNMNRG
PPANINRLPPVPFQNPIGAQAPSVPAFSQAPVIPVINKPATVGNPLEKFYIELTRIPTDL
LRPAALEAFIRPTLPLTLSSVKTVFGPGGIHMHTIIRLDSIADYATMMRRNGEQGIKITQ
SDKKSFDSAIDGAPIPIAVSSVITEKRDDDDSKKLKRSRWETDSPQRSPRRSPPRRNIRD
RSRSRSPPRRRRRSRSPRRLDEHTDPTRWCIQVTNVPFRMKEEELLEWFAEKVRPAKLVR
TFYSDGNASDRWVAEFSSESLMRRSFSIRTLCVGRTLKLSYIDNEKADEILKIEDVYGEE
RRHKNEEARMQQEEAEKSNPPSFFNAPPISRPPISNPIQRPVMLQNPAVAPNGHNGPPLN
GMNGSIAPAFNGQSQPVRGGFIPRGNGFPPPARGAMMQRGGHGGNQGFHKNGGNNFNAQE
PQGSFGNQGPDSFRGGHRGGFRGGRGRGGFNGAFRGEEIQPSRNEFMELVKSIGPRGTVL
TCNGFPKDVTLEDVVDFFIDYEPDRNSIRIRRGEDGVMTGECMLACMSPENARRASVDLD
GQKLRNSPITVRVL
NT seq 2925 nt   +upstreamnt  +downstreamnt
atgtcagttatcattcggctgaaaaatttgcccatcacggcggccgcttctgatgttcgc
acttttttttccggtttgaaaattcctgatggcgctgttcatattattggtggcgacgaa
ggagaagtttttgtcggatttgcttctgatgaagacgcaagaattgcaatgacgagagac
agatctttaatacatggcgccgagatccgcttgctcctctcttccaaatcagaacaaaat
tcggtgattactgctcggaaaaatggaacatatgcctctccagaatcatatgaagagtac
gttccgacagctccatcccagccttcagctccacaggctccacaaagttggaattctcaa
ccagcgccgaacccatacgccgcaacgtcgggttatgaggcctcgtatcctccacagaat
tccaacgctgctcgctcaaatttcaacaatcaaaacaattacggtagtcgtgcagatatg
ccacagctccaatctcctgggaagccgaaggaaacattcggttatggttataataatagt
tataagaatacgcatcaacaacaaggtcctccttctcacaatgtgaatcaacgattcggt
tcaaatccttcttcctcgaaccctacggaaccgttgaaaagtagacccactccaccagtc
caatatcaacagaatcaagcacatcaagaaccaccgcatcagaatggacctcatcaaaat
gggccaaatcaaaatcagagattctcgaactacggaattaaaggaggaaatcatagcgga
aacagaacaaataattttcatgaacctggaaatgaagcagtgcctggaggagattcatgg
agggataatacttataaccaaccgcctcgcaatgatttcaaacaaggttacaaaggagat
tacaacagtgagtaccgggaagatttcaaaaaagattccaagagcgatttcaacggatca
aacaagttcaatcaacaacttcctcctagaaatggtccctcttttgacggaaacccacaa
tcaaataatcgctttcctccacaaaatgggcgaaaaactttgatgccaacaccacaagtt
cctttccaaaatgctcctcctgctttctcatctccaccacagcaacaaggaaacgctgtt
catcctggcaacaaaccattccaaaatggtccaccgcccgtcatgaatcaacaaagaaat
attccgcccatattcccaaataatgcagctcctccaatgcagaataacatgaatcgtgga
ccaccagcaaatatcaatcgtcttcctcccgtaccattccagaacccgattggtgctcaa
gcaccatcagttcctgctttcagccaagctccagtcatcccagttataaacaaacctgcc
acagttggaaatccattggaaaagttttatatagaattgacgcgtattcccaccgacttg
ctccgtccagctgctcttgaagcttttattcgtcctacattaccgcttactctctcatca
gtgaagacagtttttggtcccggtggaatccacatgcatacaattattcgtctcgattca
attgctgactatgcaacaatgatgagaagaaatggtgaacaggggatcaaaatcacgcag
tctgataagaaatcgttcgattctgcaattgatggagcccccattcctatcgcggtctca
tctgtaattacagaaaagagagatgatgatgatagcaaaaaattgaaaagaagtagatgg
gaaactgacagtccgcagagaagtccaagaagaagtccacctcgtcgaaatatcagagac
agatcgagaagcagaagtcctcctcgtagaagaagaagatcaaggagcccacgtagactt
gatgagcacactgatccaacaagatggtgcattcaggtgaccaatgtaccatttcgtatg
aaagaagaggagttgcttgaatggttcgcagagaaagtccgcccagcaaaacttgttcga
acattttattcagatggaaatgcatccgatagatgggtggctgaattttcaagtgaaagt
ttgatgcgacgatcgttttcaattcgaacattatgtgtgggaagaactctcaaactttct
tatattgataatgagaaagctgatgagatactcaaaatagaagatgtatatggagaagaa
agacgtcataagaatgaggaagcgagaatgcaacaggaagaagctgaaaagtccaatcct
ccttcatttttcaacgctcccccaatttcacgcccgcctatctctaatccaattcaacgc
ccagtgatgctccaaaatccagccgtagctccaaatggtcataatggtcccccgctaaac
ggcatgaatggttccattgcccctgctttcaatggacagtctcaaccagtacgaggagga
tttattcctcgtggaaatggttttccaccacctgcacgaggagccatgatgcaacgtgga
gggcacggcggtaatcaaggtttccataagaatgggggaaataatttcaatgctcaagag
ccacaaggatcgtttggaaatcaaggtccagactctttccgaggagggcaccgtggtggt
ttccgcggtggacgtggacgaggcggattcaatggagcctttcgaggagaagaaattcag
ccgtcgagaaatgaatttatggagcttgtcaaatcaatcggtcctcgtggaaccgtgctt
acctgcaacggatttcccaaagatgttactctagaagacgtggttgacttcttcatcgat
tatgaacctgatcgcaactcgattcggatacgaagaggagaggatggagtgatgactgga
gagtgcatgctcgcatgtatgagcccagagaatgctcgtcgtgcttccgtcgatcttgat
ggtcaaaagcttcggaactcccccatcactgttcgagttctttga

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