Caenorhabditis remanei (nematode): GCK72_002308
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Entry
GCK72_002308 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K24526
RNA-binding protein 12
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crq03041
]
GCK72_002308
Spliceosome [BR:
crq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
GCK72_002308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
9809303
NCBI-ProteinID:
XP_003104715
UniProt:
A0A6A5HS11
E3MG54
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All DBs
Position
I:complement(10704062..10711733)
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AA seq
974 aa
AA seq
DB search
MSVIIRLKNLPITAAASDVRTFFSGLKIPDGAVHIIGGDEGEVFVGFASDEDARIAMTRD
RSLIHGAEIRLLLSSKSEQNSVITARKNGTYASPESYEEYVPTAPSQPSAPQAPQSWNSQ
PAPNPYAATSGYEASYPPQNSNAARSNFNNQNNYGSRADMPQLQSPGKPKETFGYGYNNS
YKNTHQQQGPPSHNVNQRFGSNPSSSNPTEPLKSRPTPPVQYQQNQAHQEPPHQNGPHQN
GPNQNQRFSNYGIKGGNHSGNRTNNFHEPGNEAVPGGDSWRDNTYNQPPRNDFKQGYKGD
YNSEYREDFKKDSKSDFNGSNKFNQQLPPRNGPSFDGNPQSNNRFPPQNGRKTLMPTPQV
PFQNAPPAFSSPPQQQGNAVHPGNKPFQNGPPPVMNQQRNIPPIFPNNAAPPMQNNMNRG
PPANINRLPPVPFQNPIGAQAPSVPAFSQAPVIPVINKPATVGNPLEKFYIELTRIPTDL
LRPAALEAFIRPTLPLTLSSVKTVFGPGGIHMHTIIRLDSIADYATMMRRNGEQGIKITQ
SDKKSFDSAIDGAPIPIAVSSVITEKRDDDDSKKLKRSRWETDSPQRSPRRSPPRRNIRD
RSRSRSPPRRRRRSRSPRRLDEHTDPTRWCIQVTNVPFRMKEEELLEWFAEKVRPAKLVR
TFYSDGNASDRWVAEFSSESLMRRSFSIRTLCVGRTLKLSYIDNEKADEILKIEDVYGEE
RRHKNEEARMQQEEAEKSNPPSFFNAPPISRPPISNPIQRPVMLQNPAVAPNGHNGPPLN
GMNGSIAPAFNGQSQPVRGGFIPRGNGFPPPARGAMMQRGGHGGNQGFHKNGGNNFNAQE
PQGSFGNQGPDSFRGGHRGGFRGGRGRGGFNGAFRGEEIQPSRNEFMELVKSIGPRGTVL
TCNGFPKDVTLEDVVDFFIDYEPDRNSIRIRRGEDGVMTGECMLACMSPENARRASVDLD
GQKLRNSPITVRVL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttatcattcggctgaaaaatttgcccatcacggcggccgcttctgatgttcgc
acttttttttccggtttgaaaattcctgatggcgctgttcatattattggtggcgacgaa
ggagaagtttttgtcggatttgcttctgatgaagacgcaagaattgcaatgacgagagac
agatctttaatacatggcgccgagatccgcttgctcctctcttccaaatcagaacaaaat
tcggtgattactgctcggaaaaatggaacatatgcctctccagaatcatatgaagagtac
gttccgacagctccatcccagccttcagctccacaggctccacaaagttggaattctcaa
ccagcgccgaacccatacgccgcaacgtcgggttatgaggcctcgtatcctccacagaat
tccaacgctgctcgctcaaatttcaacaatcaaaacaattacggtagtcgtgcagatatg
ccacagctccaatctcctgggaagccgaaggaaacattcggttatggttataataatagt
tataagaatacgcatcaacaacaaggtcctccttctcacaatgtgaatcaacgattcggt
tcaaatccttcttcctcgaaccctacggaaccgttgaaaagtagacccactccaccagtc
caatatcaacagaatcaagcacatcaagaaccaccgcatcagaatggacctcatcaaaat
gggccaaatcaaaatcagagattctcgaactacggaattaaaggaggaaatcatagcgga
aacagaacaaataattttcatgaacctggaaatgaagcagtgcctggaggagattcatgg
agggataatacttataaccaaccgcctcgcaatgatttcaaacaaggttacaaaggagat
tacaacagtgagtaccgggaagatttcaaaaaagattccaagagcgatttcaacggatca
aacaagttcaatcaacaacttcctcctagaaatggtccctcttttgacggaaacccacaa
tcaaataatcgctttcctccacaaaatgggcgaaaaactttgatgccaacaccacaagtt
cctttccaaaatgctcctcctgctttctcatctccaccacagcaacaaggaaacgctgtt
catcctggcaacaaaccattccaaaatggtccaccgcccgtcatgaatcaacaaagaaat
attccgcccatattcccaaataatgcagctcctccaatgcagaataacatgaatcgtgga
ccaccagcaaatatcaatcgtcttcctcccgtaccattccagaacccgattggtgctcaa
gcaccatcagttcctgctttcagccaagctccagtcatcccagttataaacaaacctgcc
acagttggaaatccattggaaaagttttatatagaattgacgcgtattcccaccgacttg
ctccgtccagctgctcttgaagcttttattcgtcctacattaccgcttactctctcatca
gtgaagacagtttttggtcccggtggaatccacatgcatacaattattcgtctcgattca
attgctgactatgcaacaatgatgagaagaaatggtgaacaggggatcaaaatcacgcag
tctgataagaaatcgttcgattctgcaattgatggagcccccattcctatcgcggtctca
tctgtaattacagaaaagagagatgatgatgatagcaaaaaattgaaaagaagtagatgg
gaaactgacagtccgcagagaagtccaagaagaagtccacctcgtcgaaatatcagagac
agatcgagaagcagaagtcctcctcgtagaagaagaagatcaaggagcccacgtagactt
gatgagcacactgatccaacaagatggtgcattcaggtgaccaatgtaccatttcgtatg
aaagaagaggagttgcttgaatggttcgcagagaaagtccgcccagcaaaacttgttcga
acattttattcagatggaaatgcatccgatagatgggtggctgaattttcaagtgaaagt
ttgatgcgacgatcgttttcaattcgaacattatgtgtgggaagaactctcaaactttct
tatattgataatgagaaagctgatgagatactcaaaatagaagatgtatatggagaagaa
agacgtcataagaatgaggaagcgagaatgcaacaggaagaagctgaaaagtccaatcct
ccttcatttttcaacgctcccccaatttcacgcccgcctatctctaatccaattcaacgc
ccagtgatgctccaaaatccagccgtagctccaaatggtcataatggtcccccgctaaac
ggcatgaatggttccattgcccctgctttcaatggacagtctcaaccagtacgaggagga
tttattcctcgtggaaatggttttccaccacctgcacgaggagccatgatgcaacgtgga
gggcacggcggtaatcaaggtttccataagaatgggggaaataatttcaatgctcaagag
ccacaaggatcgtttggaaatcaaggtccagactctttccgaggagggcaccgtggtggt
ttccgcggtggacgtggacgaggcggattcaatggagcctttcgaggagaagaaattcag
ccgtcgagaaatgaatttatggagcttgtcaaatcaatcggtcctcgtggaaccgtgctt
acctgcaacggatttcccaaagatgttactctagaagacgtggttgacttcttcatcgat
tatgaacctgatcgcaactcgattcggatacgaagaggagaggatggagtgatgactgga
gagtgcatgctcgcatgtatgagcccagagaatgctcgtcgtgcttccgtcgatcttgat
ggtcaaaagcttcggaactcccccatcactgttcgagttctttga
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