Caenorhabditis remanei (nematode): GCK72_002347
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Entry
GCK72_002347 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K06171
nicastrin
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
GCK72_002347
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
DUF1542
DUF3918
Inhibitor_I29
Motif
Other DBs
NCBI-GeneID:
9810189
NCBI-ProteinID:
XP_003111938
UniProt:
E3LUW2
A0A6A5HRH9
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All DBs
Position
I:10835769..10838322
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AA seq
722 aa
AA seq
DB search
MKSWLAIVLLIGGVRCDGFSDQVFKTLYIGEGNACYRTFNKTHEFGCQATKENENGLIVR
IDKQEDFENLESCWRALYPAFNGKFWALLPVNLIGRNTISLLKSSECLAGVILYNSPQPQ
HPEEEITSASHDADCPNAASDYYFQNKKEEYCKRKINSGGSITRDGLMRTDWRIQMVFID
KSDDLSVIERCHSLFNIPKENGTTGYPYCGMSFRLANMAAGNSEICNRRGKSKAKLFQAN
FDSGEVPQICGAMHSDNIFAFPTPIPSSRSNETMNSSKYMMITSRMDSFGMIPEISVGEV
SVLTSIISVIAAARSMGTQLEKWQKASNASNKNVFFAFFNGESLDYIGSGAAAYQMGKDI
FPQRNIRSDIVRIHPIHVNEIDYVLEVQQIGVSKGRKYYVHVDGERYDKNKTSTNKLIDR
IERGLRSHGFDLEKLTDSVTRVPPASWHSFAKTDPTVQSLLIAPFKEEYEYRRINSILDK
NQWTNDEKEKAIQEIEAVATSILAASADYVGLETDDVVAKVDKALIATLFDCLIVSNFWF
DCDFMKKLDGDRYHKLFNSYGFNEKSTYISMETHTAFPTVLHWLTIFALGSDKETLNVKS
ETSCSHLGEFQAMYTYTWQPSPYTGNFSCLKSSIGKKVMVSPAVDPYTPEEEMNTRYSTW
MESVYVIESVNLYLMEDTSFEYTMLIIAVLSALLSIFAVGRCSESTFIVDEGEPAAEGGE
PL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatggttagctatagttttattaatcggtggagtacgttgcgatggattttcg
gatcaagttttcaagacactgtatataggagaaggaaatgcgtgttatagaacattcaat
aaaactcacgaattcggatgtcaggctacaaaagaaaatgagaatggattgattgttcga
attgacaaacaggaagatttcgaaaatttggaatcctgctggagagcactgtatccagcc
ttcaacggaaagttctgggctcttctgccagtcaatcttattggacgcaacacaatttcc
cttctaaaatcatctgaatgcttagcaggcgtaattttgtacaactctccacaaccgcaa
caccctgaagaggaaatcacttctgcctcccatgacgctgattgtccaaatgcggccagt
gattactattttcaaaacaaaaaagaggaatattgtaaaagaaaaataaattctggagga
tctatcactcgagacggtttaatgagaaccgattggcgaattcaaatggtattcatcgat
aaatcagatgatctcagtgtcatagaaagatgccattcattattcaacattcccaaagag
aatggaacaactggttacccttattgtggcatgagcttccgattagctaacatggcagcc
ggaaattcagaaatttgtaaccgaagaggaaagagtaaggcaaaactgttccaggcgaat
ttcgatagtggagaagttcctcaaatttgtggggcaatgcatagcgataacatctttgca
ttcccaacaccgataccctcatctcgatccaatgaaactatgaattcgagcaaatacatg
atgatcacatcaagaatggatagtttcggaatgataccagaaatttctgtcggtgaagta
tcagtactcacttctatcatctccgtgatagcggctgctcgatccatgggaactcaactg
gaaaagtggcagaaagcatcaaatgcatcgaataaaaatgtatttttcgcatttttcaac
ggtgaatcacttgactacataggaagcggtgccgcagcgtatcagatgggaaaagacatc
ttcccacagcgaaatattcgttcggatattgtacgcatccatccaattcatgtcaacgaa
atcgattatgttttggaagttcaacaaattggtgtatcgaaaggaagaaagtactatgtg
catgtggatggtgaacgatacgataagaacaagacgtcaacgaataagttgattgatcga
attgaacggggtcttcgaagtcatggattcgatttagagaagttaactgatagtgtgaca
agagttccaccagcaagttggcactccttcgcgaaaaccgatcccactgttcaatctcta
ctgattgcaccattcaaagaggaatatgagtacagacgaattaattcgattcttgataag
aatcaatggactaatgacgaaaaagaaaaagctattcaagagatcgaggcagttgcaaca
tctattcttgcagcatctgctgattatgttggattggagacagatgatgtcgttgcaaaa
gttgataaagctttgatagcaacactgtttgactgtcttattgtttctaatttctggttc
gattgtgatttcatgaagaagctggacggtgaccgttatcataaactttttaattcgtat
ggcttcaatgagaaatcaacttatatttcaatggaaacacatactgcattcccaactgta
cttcactggctgacgatattcgctttgggaagtgataaagaaacattgaatgtgaagagt
gaaacgagttgttcccatcttggagaattccaagcgatgtacacgtacacttggcaaccg
agtccgtataccggaaacttcagttgtctcaaatcgtctattggaaagaaagtgatggtg
tcaccagctgtggatccatacacacctgaagaagaaatgaacacgcgatattcgacatgg
atggaatcggtttacgttatcgagtctgtcaatttgtacttgatggaggacacatcattc
gagtacactatgctaattattgcagtattatcagctttgttatccatattcgctgttggc
cgctgttccgaatctacattcatcgtcgatgaaggtgaacccgcagcagaaggaggagaa
ccactttaa
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