KEGG   Caenorhabditis remanei (nematode): GCK72_002550
Entry
GCK72_002550      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03020  RNA polymerase
crq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GCK72_002550
  09124 Replication and repair
   03420 Nucleotide excision repair
    GCK72_002550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crq03021]
    GCK72_002550
   03400 DNA repair and recombination proteins [BR:crq03400]
    GCK72_002550
Transcription machinery [BR:crq03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     GCK72_002550
DNA repair and recombination proteins [BR:crq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      GCK72_002550
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 9809910
NCBI-ProteinID: XP_053592130
UniProt: A0A2P4V993
LinkDB
Position
I:complement(11516191..11517274)
AA seq 281 aa
MPYANQPNIEVTELSNDLMKFVLWDTDLSVANSLRRVFMAEVPTIAIDWVQIETNTSVLH
DEFIAHRMGLIPFLSDYHVEKMQYTRECECAEFCDECSIPFILQMKCKDEATLAVTTADL
RCMNNDTTVRPACGKALRERGTGREDFHNREEILIVKLRKGQELNLKAYAKKGFGKEHAK
WNPTCGVAFEYDPDNALRHTIYPNVEEWPRSDHSALPEDSTEKEAPFDQDGKPNKFFFSI
EGTGALPVQRIVTMGIGILKKKLEELNMALSLELQAHAQQQ
NT seq 846 nt   +upstreamnt  +downstreamnt
atgccatatgccaatcagccgaacatcgaggtgacagaactgtcaaatgatttaatgaag
tttgtgttatgggacacagatttgagtgtcgctaattcgttaaggcgtgtgtttatggca
gaggttccaacaattgccatcgattgggtgcaaattgaaaccaacacttcagttcttcac
gatgagttcatcgcacacagaatgggattaattccgtttctctctgattatcatgtggaa
aaaatgcaatacacaagagaatgtgaatgtgccgagttctgcgatgaatgttcgattcct
ttcatcttgcaaatgaagtgcaaagacgaggcaactttggcagtcactacagcagattta
cgctgtatgaacaatgatacgacagttcgtcctgcatgcggaaaagcacttcgtgaacgt
ggaacaggtcgagaggatttccacaaccgagaagaaattttgattgtcaagcttcgaaaa
ggtcaagaattgaatctcaaagcatatgccaagaaaggatttggaaaggagcacgctaag
tggaatccaacatgcggagtagcttttgaatacgatccagacaatgctctacgtcatacg
atttacccaaatgttgaggagtggccaagaagtgaccactctgctctgccagaagacagt
actgagaaagaagcgccgtttgatcaagacggaaaaccgaacaaatttttcttttcgatc
gaaggcactggcgctctcccagttcaacgaattgttacgatgggaattggaattctcaaa
aagaaactcgaagaactcaatatggctctctctttggaacttcaagcgcacgcccaacaa
cagtga

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