Caenorhabditis remanei (nematode): GCK72_002550
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Entry
GCK72_002550 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03020
RNA polymerase
crq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GCK72_002550
09124 Replication and repair
03420 Nucleotide excision repair
GCK72_002550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_002550
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_002550
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
GCK72_002550
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
GCK72_002550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
9809910
NCBI-ProteinID:
XP_053592130
UniProt:
A0A2P4V993
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Position
I:complement(11516191..11517274)
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AA seq
281 aa
AA seq
DB search
MPYANQPNIEVTELSNDLMKFVLWDTDLSVANSLRRVFMAEVPTIAIDWVQIETNTSVLH
DEFIAHRMGLIPFLSDYHVEKMQYTRECECAEFCDECSIPFILQMKCKDEATLAVTTADL
RCMNNDTTVRPACGKALRERGTGREDFHNREEILIVKLRKGQELNLKAYAKKGFGKEHAK
WNPTCGVAFEYDPDNALRHTIYPNVEEWPRSDHSALPEDSTEKEAPFDQDGKPNKFFFSI
EGTGALPVQRIVTMGIGILKKKLEELNMALSLELQAHAQQQ
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccatatgccaatcagccgaacatcgaggtgacagaactgtcaaatgatttaatgaag
tttgtgttatgggacacagatttgagtgtcgctaattcgttaaggcgtgtgtttatggca
gaggttccaacaattgccatcgattgggtgcaaattgaaaccaacacttcagttcttcac
gatgagttcatcgcacacagaatgggattaattccgtttctctctgattatcatgtggaa
aaaatgcaatacacaagagaatgtgaatgtgccgagttctgcgatgaatgttcgattcct
ttcatcttgcaaatgaagtgcaaagacgaggcaactttggcagtcactacagcagattta
cgctgtatgaacaatgatacgacagttcgtcctgcatgcggaaaagcacttcgtgaacgt
ggaacaggtcgagaggatttccacaaccgagaagaaattttgattgtcaagcttcgaaaa
ggtcaagaattgaatctcaaagcatatgccaagaaaggatttggaaaggagcacgctaag
tggaatccaacatgcggagtagcttttgaatacgatccagacaatgctctacgtcatacg
atttacccaaatgttgaggagtggccaagaagtgaccactctgctctgccagaagacagt
actgagaaagaagcgccgtttgatcaagacggaaaaccgaacaaatttttcttttcgatc
gaaggcactggcgctctcccagttcaacgaattgttacgatgggaattggaattctcaaa
aagaaactcgaagaactcaatatggctctctctttggaacttcaagcgcacgcccaacaa
cagtga
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