Caenorhabditis remanei (nematode): GCK72_002636
Help
Entry
GCK72_002636 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq00600
Sphingolipid metabolism
crq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
GCK72_002636
Enzymes [BR:
crq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
GCK72_002636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
9809927
NCBI-ProteinID:
XP_053592168
UniProt:
A0A6A5HWQ0
LinkDB
All DBs
Position
I:complement(11830886..11833282)
Genome browser
AA seq
636 aa
AA seq
DB search
MFQQRPAPTELPPVDDVIAICRDISSNIISTERNVPIAKLIIQKLFRNPHIDLCAILPPP
QHYQESPYNHINSLINGNSIFFETVLEDDQLCSDLWDSILHQCEVSGAPTDPAKDSILFQ
LVAQYVTRMLPCDESASTSMSVPRSPKTIHQTIRTPLQLFRADSPLVNRISIEDRSQIMS
VTNVSFQPRLVQNFCSFIAKTCETAQFTNANRLLLIRFLLKQFHVFCQHSTGDTEVDSWK
LDLMAAAPFKWPLLDFFKSSISQVPTSTVFRDIMMCWLTYARPWRYHNMSSPSDFAPAAK
YKQFFEKNIEFYELVLGKIIKKFAAFEMCEELLTSLRAIVEFAWREPQTLLLLHVQLDIQ
PHVFELLKQMQVVVRTHMRIIQSENAKNSGFWGSLFPSAEIPRIASSERICNDLLTLLKD
SDSYVGTHLMSEMEVTQVGGDANQTVDYARDRHCLSLLNETPKSGLGLPDHFIDSPTNHM
VLTPIGQRQVLNREKRFDFSRCAKDDPKAPPRSYELAPAVRLTNALAQKLNEFSFVRSIG
EHYSEKTVIGAIVRKVMYPPVPNLDPNATVPAYSARVVRSPPLLRLRFFASYMSIIGIGW
VILAYNYGNIFTIVSVIVFALILSVLYLAQIDSGSY
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacaacgtccggcacctacagaactcccgccagtagatgatgtcattgcgatt
tgtcgggatatcagttctaatattatttccacagaaagaaatgttcctatcgccaaattg
attattcaaaaacttttccgaaatccacatatcgatttgtgtgccatcctccctcctcca
caacactatcaggaatcgccatacaatcacattaactcgcttataaacggaaattcgata
ttcttcgaaaccgttctggaggatgatcagttgtgctctgatttatgggatagcattcta
catcaatgcgaggtttcaggggcgccaacagaccctgcgaaagactcgatattattccaa
ttagtcgctcaatatgttactcgaatgcttccttgcgacgaatcagcttccacgtctatg
tcagttccacgttcaccgaaaactatacatcaaaccattcgcacgccgcttcaactgttc
cgcgccgattctccgcttgtaaatcgaattagtattgaggatcggagtcaaattatgtcg
gtgacaaacgtcagtttccagccgcgactagttcaaaatttctgcagttttattgccaaa
acgtgcgaaacggctcaattcaccaatgcaaatcgattgctgcttattcggttcctcttg
aaacaattccacgtattctgtcagcacagcacgggagacactgaagttgacagctggaaa
ttagatctgatggctgctgctccattcaaatggccacttttagactttttcaagagttcc
ataagtcaagtgcccacaagtactgttttcagggatattatgatgtgctggctgacctac
gcgaggccatggcgatatcacaacatgtccagcccgtcagatttcgctccggccgcaaaa
tacaaacagttcttcgaaaagaacattgaattctatgaacttgtgttaggaaagataatc
aaaaagttcgctgcattcgaaatgtgcgaagaactgctcacgtcgttacgagcaattgta
gaattcgcatggagagaaccacagactctgttgcttcttcatgttcaactggacattcaa
ccacacgtattcgagttgctgaaacagatgcaagtggttgtccgaactcatatgagaatc
attcagagtgaaaatgcgaagaactccgggttctggggttcacttttccctagcgccgag
ataccaagaattgcttcgagtgaacggatttgcaacgatctgttgacacttttaaaagac
agtgattcctatgttggaacgcatttgatgtcggaaatggaagtgactcaagttggggga
gatgccaatcaaactgtggattacgccagggatcgacattgtctatctcttctcaacgaa
acaccgaaatctggtcttggtttacccgaccatttcatcgattcccctacgaatcacatg
gttctcaccccaatcggacaacgacaagttttgaatcgcgagaaacgattcgacttctcg
agatgtgccaaagacgaccctaaagctcctccacgaagttacgagttggcaccagctgtt
cgattaactaatgcgttggcacaaaagctgaacgaattttcgttcgttcggagtattgga
gagcattattcagagaagactgttattggtgcaatcgtccgtaaagtgatgtatccaccg
gtcccaaatctcgatccaaatgcaacagtccctgcgtactctgcacgagtcgtacgatct
cctccattacttcggcttcgatttttcgccagctacatgtcaataatcgggatcggctgg
gtcattctcgcttacaactacggaaacatcttcaccatcgtctcggtcattgtgttcgct
ctcatcctctcggtactatacctcgctcaaattgattccgggtcttattga
DBGET
integrated database retrieval system
