KEGG   Caenorhabditis remanei (nematode): GCK72_002786
Entry
GCK72_002786      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K14416  elongation factor 1 alpha-like protein
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    GCK72_002786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crq03019]
    GCK72_002786
Messenger RNA biogenesis [BR:crq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     GCK72_002786
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 MMR_HSR1 GTP_EFTU_D2 SRPRB AAA_22 Septin Dynamin_N DUF4589
Other DBs
NCBI-GeneID: 9806619
NCBI-ProteinID: XP_053592248
UniProt: A0A6A5HXY2
LinkDB
Position
I:complement(12405393..12407918)
AA seq 556 aa
MSRHRNIRRMIIEHEREDYYDDYEDYEDEEETENQYTYHNRKPTAVPLGRKAPFVQQNQK
HAKKHNNGQCAPLNEPKKTEQVKDVLRESATPAMSKKSSEMDLTEYRRNQLLNIARAPFV
PRRTAKPRLVRKDLINLIVVGHVDAGKSTLMGHLLHDLDVVDTRTIDKYKRDAARSGKAS
FAYAWVLDETEEERERGVTMDIGRTSFETENRRIVLLDAPGHKDFISNMITGTSQADAAI
LVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLVVAISKLDTVEWSYDRYEEIRNSLS
VFLTRHAGFSKPIFVPVSGFTGENLVKRIDLSWYDGPCLLELMNSFVAPKLSFGGPLRIG
ISDVHKVSENQVVVSGKVESGEVEKDDKVYIMPSVTPATIKECAGNIGAAQYVTGDFIMF
TLQGTFEPESVQVGSVVVKSGPDTLIPGRKFQVRLVVFEIATPIIKGAKSELYAHSLCIP
CTFTKLIHTIDKSNGEVLKEKPRFISRGMSAVVEIETDHDVAIEAFTSCRALGRVTFRSG
GNTIAAGIVEKTITPQ
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgtctcgccaccgtaatatccgaagaatgatcattgagcacgagcgcgaagactactat
gacgattacgaggattatgaagacgaggaggaaactgagaatcaatatacctatcataac
cgcaagcctacggctgtaccactcggtcgtaaagctccgttcgttcaacagaaccagaaa
catgccaagaagcacaataatggacagtgtgctcctttaaatgagccgaaaaaaacggag
caggtgaaagatgtactaagagagtctgcaactccagctatgagcaaaaagtcgtctgaa
atggatctcaccgagtatcgacgcaaccagctcttgaatatcgctagagctccattcgtt
cctcggagaacggcgaagccaagactggtcagaaaagatttaataaatcttatcgttgta
gggcacgttgatgcaggaaaaagcactttgatggggcatttgttgcatgatctggacgtg
gtagacactagaaccatcgacaagtacaagcgtgacgcagcaagaagtgggaaggcgtcg
ttcgcctacgcatgggttctcgatgaaactgaagaagaacgtgaacgcggagtaacgatg
gatatcggaagaacaagtttcgagacagaaaatcgtcgaatcgtgcttctcgacgctcca
ggacacaaggacttcatttcaaacatgatcactggaacgtcacaagcggacgctgcgatt
ttagtagtgaatgcaacaactggagagttcgaaacaggatttgagaatggaggacagacg
aaagagcacgcgttgttgctcagaagcttaggtgtcactcaactggtagtggctatcagc
aaactggacaccgtggagtggtcgtacgacagatatgaggaaatccggaacagtctgtca
gttttcctgactcgtcatgctggattctccaagccaatcttcgtgccggtatctggattt
accggggagaacttagtgaaaaggatagacttgagttggtacgacggaccatgtctactg
gagttgatgaatagttttgtggctccaaaactttcgttcggtggtccgttgagaattggt
atcagtgatgtccataaggtgtctgaaaatcaggttgtcgtctctggaaaagtcgagtcg
ggagaagttgaaaaagacgacaaggtatatattatgccaagtgtaacacctgccactatc
aaggaatgtgctggtaacattggtgctgctcaatacgtcacaggagattttatcatgttc
actctacaaggaacattcgagccagagtccgtccaagttggctcagttgtcgtcaaatca
ggaccggatactctgatcccgggtagaaagtttcaagttcggctagtggtgtttgaaatc
gcgacccctatcatcaagggagcaaaatccgaattgtatgcgcattctctatgcattcca
tgtacattcaccaagcttatccatacaattgataagtcgaatggagaagttttgaaggag
aagccacgtttcatttcgagaggaatgtctgctgtggttgaaattgaaactgatcatgat
gttgcaatcgaagcattcactagttgtcgggcactcggaagggtcactttcagatctggt
ggaaacacaattgccgcaggaatcgttgagaaaactatcactccacaatga

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