Caenorhabditis remanei (nematode): GCK72_002786
Help
Entry
GCK72_002786 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GCK72_002786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_002786
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
GCK72_002786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
GTP_EFTU_D2
SRPRB
AAA_22
Septin
Dynamin_N
DUF4589
Motif
Other DBs
NCBI-GeneID:
9806619
NCBI-ProteinID:
XP_053592248
UniProt:
A0A6A5HXY2
LinkDB
All DBs
Position
I:complement(12405393..12407918)
Genome browser
AA seq
556 aa
AA seq
DB search
MSRHRNIRRMIIEHEREDYYDDYEDYEDEEETENQYTYHNRKPTAVPLGRKAPFVQQNQK
HAKKHNNGQCAPLNEPKKTEQVKDVLRESATPAMSKKSSEMDLTEYRRNQLLNIARAPFV
PRRTAKPRLVRKDLINLIVVGHVDAGKSTLMGHLLHDLDVVDTRTIDKYKRDAARSGKAS
FAYAWVLDETEEERERGVTMDIGRTSFETENRRIVLLDAPGHKDFISNMITGTSQADAAI
LVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLVVAISKLDTVEWSYDRYEEIRNSLS
VFLTRHAGFSKPIFVPVSGFTGENLVKRIDLSWYDGPCLLELMNSFVAPKLSFGGPLRIG
ISDVHKVSENQVVVSGKVESGEVEKDDKVYIMPSVTPATIKECAGNIGAAQYVTGDFIMF
TLQGTFEPESVQVGSVVVKSGPDTLIPGRKFQVRLVVFEIATPIIKGAKSELYAHSLCIP
CTFTKLIHTIDKSNGEVLKEKPRFISRGMSAVVEIETDHDVAIEAFTSCRALGRVTFRSG
GNTIAAGIVEKTITPQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccaccgtaatatccgaagaatgatcattgagcacgagcgcgaagactactat
gacgattacgaggattatgaagacgaggaggaaactgagaatcaatatacctatcataac
cgcaagcctacggctgtaccactcggtcgtaaagctccgttcgttcaacagaaccagaaa
catgccaagaagcacaataatggacagtgtgctcctttaaatgagccgaaaaaaacggag
caggtgaaagatgtactaagagagtctgcaactccagctatgagcaaaaagtcgtctgaa
atggatctcaccgagtatcgacgcaaccagctcttgaatatcgctagagctccattcgtt
cctcggagaacggcgaagccaagactggtcagaaaagatttaataaatcttatcgttgta
gggcacgttgatgcaggaaaaagcactttgatggggcatttgttgcatgatctggacgtg
gtagacactagaaccatcgacaagtacaagcgtgacgcagcaagaagtgggaaggcgtcg
ttcgcctacgcatgggttctcgatgaaactgaagaagaacgtgaacgcggagtaacgatg
gatatcggaagaacaagtttcgagacagaaaatcgtcgaatcgtgcttctcgacgctcca
ggacacaaggacttcatttcaaacatgatcactggaacgtcacaagcggacgctgcgatt
ttagtagtgaatgcaacaactggagagttcgaaacaggatttgagaatggaggacagacg
aaagagcacgcgttgttgctcagaagcttaggtgtcactcaactggtagtggctatcagc
aaactggacaccgtggagtggtcgtacgacagatatgaggaaatccggaacagtctgtca
gttttcctgactcgtcatgctggattctccaagccaatcttcgtgccggtatctggattt
accggggagaacttagtgaaaaggatagacttgagttggtacgacggaccatgtctactg
gagttgatgaatagttttgtggctccaaaactttcgttcggtggtccgttgagaattggt
atcagtgatgtccataaggtgtctgaaaatcaggttgtcgtctctggaaaagtcgagtcg
ggagaagttgaaaaagacgacaaggtatatattatgccaagtgtaacacctgccactatc
aaggaatgtgctggtaacattggtgctgctcaatacgtcacaggagattttatcatgttc
actctacaaggaacattcgagccagagtccgtccaagttggctcagttgtcgtcaaatca
ggaccggatactctgatcccgggtagaaagtttcaagttcggctagtggtgtttgaaatc
gcgacccctatcatcaagggagcaaaatccgaattgtatgcgcattctctatgcattcca
tgtacattcaccaagcttatccatacaattgataagtcgaatggagaagttttgaaggag
aagccacgtttcatttcgagaggaatgtctgctgtggttgaaattgaaactgatcatgat
gttgcaatcgaagcattcactagttgtcgggcactcggaagggtcactttcagatctggt
ggaaacacaattgccgcaggaatcgttgagaaaactatcactccacaatga
DBGET
integrated database retrieval system