KEGG   Caenorhabditis remanei (nematode): GCK72_002821
Entry
GCK72_002821      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K18328  lariat debranching enzyme [EC:3.1.-.-]
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crq03041]
    GCK72_002821
   03009 Ribosome biogenesis [BR:crq03009]
    GCK72_002821
Spliceosome [BR:crq03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    GCK72_002821
Ribosome biogenesis [BR:crq03009]
 Eukaryotic type
  90S particles
   RNase
    GCK72_002821
SSDB
Motif
Pfam: DBR1 Metallophos Metallophos_2
Other DBs
NCBI-GeneID: 9806618
NCBI-ProteinID: XP_053592273
UniProt: A0A6A5HX36
LinkDB
Position
I:complement(12571873..12574493)
AA seq 505 aa
MSSEAPDDHCCGHETTSHEDPAPQPLITETGSQRKAKIAVVGCSHGEMDAIYETMALIEE
KKGYKFDLLICCGDYQSVRNYGDLHQMNVPRTYLNLQTFYKYYSGEKTAPVLTIFIGGNH
EASGFLSELPNGGWVAPNIYYMGFANCIQFAGLRIAGLSGIYKIFDAEFSHHERAPFNEN
SIKTAYHVRNVDMFRLRQLKPANDDKTSNPIDIMLTHDWPGGIPDYGNKNWLFKKKDRFE
ADHDAGRLGNPVAMKLLFDCRPRYYLAAHLHIAFAALVPHKGTGTDRPQPTRFLSLDKPI
PGRQFMQALEINVAEDAKMELSYDPQWLAILKNTDLLTVADKVKIVLPDRVGREPCIYER
KDFRPTEEEMAEIEKLGDLTIKTDSFRHTAPPLKQESGQSLDDVPPSAYYRNPQSAEFCQ
WLGIRDLNQMLIEKSSEYVGVPYYMMPDDVDSKPNQDDVDFGDEDFVIDRGHHEEEPEAK
KIRLEGAEGVGEESGDDSEDVGAAE
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtcatctgaagcacctgatgatcactgctgtggtcatgaaaccaccagccacgaagat
cctgctccacaaccacttatcactgaaaccgggagtcaaagaaaagcgaaaattgctgtt
gtcggatgctcacatggagaaatggatgcgatttatgaaacaatggcactgatcgaggag
aagaagggatataaattcgatttattgatttgttgcggtgactatcaatcagttcgcaat
tacggggacttgcaccaaatgaatgttccgcgaacatatctcaatcttcagacattttat
aaatattattccggagagaaaaccgctccagtcctcacaattttcatcggtggaaaccac
gaagcctctggttttctgtcggaattaccgaatggtggatgggtggcacccaatatttat
tatatgggattcgcgaactgtattcaattcgctggactccgaatcgctggattatcggga
atttataaaattttcgacgcagaattctctcatcacgagcgggcgcctttcaatgaaaat
agcattaaaactgcatatcatgtcagaaatgtcgatatgttccgtctgagacaactgaaa
ccagcgaatgatgataaaacttctaacccaatcgatatcatgttgacacatgattggcct
ggaggaattccggattacgggaataaaaattggcttttcaagaaaaaagatcggtttgaa
gccgatcatgacgctggaagattgggaaatcccgtcgcgatgaagttgctttttgactgt
cggccccggtactacctggccgcccatctccacattgcctttgccgccctcgtcccacac
aagggaactggaacagaccgtccccaaccgactcgattcctctctctcgacaaaccaatc
cctggaagacaattcatgcaagcactcgaaataaatgtggcagaagatgcgaaaatggaa
ttgtcatatgatccgcaatggctggcaattctcaagaataccgatttgcttactgtagct
gacaaagtgaaaatagtacttccggatagagttggaagggaaccgtgtatttatgaacgg
aaagatttccgaccgactgaagaggaaatggcggaaattgagaaattgggagatttgacg
attaaaacggatagtttcagacacacggcgccgccgttgaaacaggaatccggacaatca
cttgatgacgtgccacccagtgcctactaccgtaaccctcaatccgcggagttctgtcaa
tggttgggaatccgagatctgaatcaaatgctcatcgagaaatcatcagaatatgtaggc
gttccgtactacatgatgccagatgacgtggattcgaaaccaaatcaagatgacgtggat
ttcggagacgaagattttgtgattgatagaggacatcatgaggaggagccagaagccaag
aaaatcagactggagggcgctgaaggcgttggagaagaatctggagacgattcggaagac
gtcggagctgctgaataa

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