Caenorhabditis remanei (nematode): GCK72_002821
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Entry
GCK72_002821 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crq03041
]
GCK72_002821
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_002821
Spliceosome [BR:
crq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
GCK72_002821
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
90S particles
RNase
GCK72_002821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
9806618
NCBI-ProteinID:
XP_053592273
UniProt:
A0A6A5HX36
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All DBs
Position
I:complement(12571873..12574493)
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AA seq
505 aa
AA seq
DB search
MSSEAPDDHCCGHETTSHEDPAPQPLITETGSQRKAKIAVVGCSHGEMDAIYETMALIEE
KKGYKFDLLICCGDYQSVRNYGDLHQMNVPRTYLNLQTFYKYYSGEKTAPVLTIFIGGNH
EASGFLSELPNGGWVAPNIYYMGFANCIQFAGLRIAGLSGIYKIFDAEFSHHERAPFNEN
SIKTAYHVRNVDMFRLRQLKPANDDKTSNPIDIMLTHDWPGGIPDYGNKNWLFKKKDRFE
ADHDAGRLGNPVAMKLLFDCRPRYYLAAHLHIAFAALVPHKGTGTDRPQPTRFLSLDKPI
PGRQFMQALEINVAEDAKMELSYDPQWLAILKNTDLLTVADKVKIVLPDRVGREPCIYER
KDFRPTEEEMAEIEKLGDLTIKTDSFRHTAPPLKQESGQSLDDVPPSAYYRNPQSAEFCQ
WLGIRDLNQMLIEKSSEYVGVPYYMMPDDVDSKPNQDDVDFGDEDFVIDRGHHEEEPEAK
KIRLEGAEGVGEESGDDSEDVGAAE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgaagcacctgatgatcactgctgtggtcatgaaaccaccagccacgaagat
cctgctccacaaccacttatcactgaaaccgggagtcaaagaaaagcgaaaattgctgtt
gtcggatgctcacatggagaaatggatgcgatttatgaaacaatggcactgatcgaggag
aagaagggatataaattcgatttattgatttgttgcggtgactatcaatcagttcgcaat
tacggggacttgcaccaaatgaatgttccgcgaacatatctcaatcttcagacattttat
aaatattattccggagagaaaaccgctccagtcctcacaattttcatcggtggaaaccac
gaagcctctggttttctgtcggaattaccgaatggtggatgggtggcacccaatatttat
tatatgggattcgcgaactgtattcaattcgctggactccgaatcgctggattatcggga
atttataaaattttcgacgcagaattctctcatcacgagcgggcgcctttcaatgaaaat
agcattaaaactgcatatcatgtcagaaatgtcgatatgttccgtctgagacaactgaaa
ccagcgaatgatgataaaacttctaacccaatcgatatcatgttgacacatgattggcct
ggaggaattccggattacgggaataaaaattggcttttcaagaaaaaagatcggtttgaa
gccgatcatgacgctggaagattgggaaatcccgtcgcgatgaagttgctttttgactgt
cggccccggtactacctggccgcccatctccacattgcctttgccgccctcgtcccacac
aagggaactggaacagaccgtccccaaccgactcgattcctctctctcgacaaaccaatc
cctggaagacaattcatgcaagcactcgaaataaatgtggcagaagatgcgaaaatggaa
ttgtcatatgatccgcaatggctggcaattctcaagaataccgatttgcttactgtagct
gacaaagtgaaaatagtacttccggatagagttggaagggaaccgtgtatttatgaacgg
aaagatttccgaccgactgaagaggaaatggcggaaattgagaaattgggagatttgacg
attaaaacggatagtttcagacacacggcgccgccgttgaaacaggaatccggacaatca
cttgatgacgtgccacccagtgcctactaccgtaaccctcaatccgcggagttctgtcaa
tggttgggaatccgagatctgaatcaaatgctcatcgagaaatcatcagaatatgtaggc
gttccgtactacatgatgccagatgacgtggattcgaaaccaaatcaagatgacgtggat
ttcggagacgaagattttgtgattgatagaggacatcatgaggaggagccagaagccaag
aaaatcagactggagggcgctgaaggcgttggagaagaatctggagacgattcggaagac
gtcggagctgctgaataa
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