Caenorhabditis remanei (nematode): GCK72_002915
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Entry
GCK72_002915 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_002915
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
GCK72_002915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
9797556
NCBI-ProteinID:
XP_053592333
UniProt:
A0A6A5HSC6
LinkDB
All DBs
Position
I:13109398..13118680
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AA seq
631 aa
AA seq
DB search
MDSPRSHAPLCRTTGGTAVISNQRGLGTRLNPYYQSTPHQPMVQSMSQPVNYPNYGVGGV
SSSGQVLLQGPPPGLAPVGQSPDFDSCYSSCDDISHPSLSRESSDPSKLDDDQRTIRYPA
PEVVEFATKLGYSTEQLSHVLNQIGVDSKTDDVLSELVKMGLPNGKSNLMMSSQPSSSSS
TNHRPVAPSSSAPPSSTTSSSNVTSASNYASLYPQYTPDPSLRAVIVDGSNVAMLHGRKE
VFSCAGLRSCLHYFLERGHPEVLIFIPQYRREQPRSDSPITDQHILQEIERHIIYTPSRN
INGRRVVCHDDRYILRTAELKDGVVVSNDEYRDLTKENPAWRKIVEERLLMFTFVEDKFM
PPDDPSGRHGPRIESFLSKVPVVSSNPLICPYARKCTYGNKCKFYHPERANGQHMSVTER
LMKENQQKKSLGAVKSMQYEMFKNKHAALSRTQSLNVVKPLTENISQLPPTPESPIQMSR
QHMQLQQANSAPWQQHSAVQRHGSSPLTPVNRQMNVYPEMYNYQNHQQVLPHQHGVIGSQ
RPPKMTTTVSQTHLFAPSTAVWGHSELSVGPVNTNAETNETHSEARARVHFHLCHIFPHD
YVESVMAANPEEVNAPVLCELIIRAQKDYRK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggattccccacgaagccacgcccctttgtgccgaacaacaggtggaacagcagtcatc
agtaatcaacgaggactaggcacacgtctcaatccatactaccagtctacaccacatcaa
ccaatggttcaatcaatgtcacaacctgttaattaccccaattatggagtgggcggagtc
tcgagtagtggacaagtactcttgcaaggaccacctcccggactggcacccgtcggacag
tcgcctgattttgattcgtgttatagctcttgcgacgacatctcccatccgtcgctcagc
cgtgaatcgtccgatcccagtaaacttgatgatgaccaaagaaccataagatatccagca
ccggaagttgtcgaattcgcgacaaaattgggctattccaccgaacagctcagtcacgtt
ctgaatcagattggtgtcgactcgaagacggacgacgttctctcggaacttgtaaaaatg
ggcctccccaatgggaaatccaatctgatgatgagctcccaaccatcctcctcgtcctct
acaaatcatcgtcccgtagctccttcctcatctgcccctccatcatccacaacgtcttct
tcaaatgtgacgtcagcctccaactacgcatcattatacccacagtatacaccggatcca
agtttaagagctgtcattgtggatggatcgaatgttgccatgttacacggccgcaaagaa
gtattctcttgtgcaggtctccgctcgtgtcttcattattttctggaacgaggccatcct
gaagttctcatttttattccccaatacagaagagaacaaccacgatcggatagtccaatc
acagatcaacatattctacaggaaatcgaacgacatatcatttatactccgtctagaaac
ataaacggccgtcgtgtagtctgccacgacgacagatacattctccgaactgccgagctg
aaagacggtgtggtggtgtcaaacgacgagtatcgtgacttgacgaaagagaatccggcg
tggcggaaaattgtcgaggagcgacttcttatgttcacttttgtcgaggataaatttatg
cccccagatgatccatcaggtcgtcatggtccacgaatcgaaagtttcctctcaaaagtg
ccagtcgtctcgtcgaacccactgatttgtccatacgcccggaaatgtacatacggaaat
aaatgtaaattctatcatccggagagagcgaacggacaacatatgagtgttacggagagg
ttgatgaaagagaatcaacagaaaaagtcgttgggagcagtcaaatcaatgcaatacgag
atgttcaagaacaagcacgccgccttatcccgtactcaatccctgaatgtagtcaaacca
ctgacggaaaacatctctcaactacctccaacccccgagagtccaattcaaatgtcacgt
caacacatgcaattacaacaggctaacagtgctccatggcaacaacacagtgcagtgcaa
agacacggatcgtctccattgacaccagttaaccgacagatgaacgtctatcccgaaatg
tacaactatcaaaatcaccaacaagtgcttccacatcaacacggagtgattggaagtcaa
cgaccacctaaaatgacaactacagtatctcaaacgcatcttttcgcaccctcaactgca
gtttggggacattcggaactttcggttggaccagttaataccaacgccgaaacgaatgaa
acgcactcagaagcccgtgcacgtgtacatttccacctttgccatatttttccccatgat
tacgtcgaatcggtgatggccgccaacccggaagaagtcaacgccccggtactctgtgag
ctcattatccgagctcaaaaagactatcgcaagtaa
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