KEGG   Caenorhabditis remanei (nematode): GCK72_003046
Entry
GCK72_003046      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K15173  transcription termination factor 2 [EC:5.6.2.-]
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crq03021]
    GCK72_003046
Transcription machinery [BR:crq03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     GCK72_003046
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII
Other DBs
NCBI-GeneID: 9803897
NCBI-ProteinID: XP_053592420
UniProt: A0A6A5HSR0
LinkDB
Position
I:13758741..13774963
AA seq 991 aa
MISVNLEHRTAISTILLSEKTDLRSKAALRERLLRKSLKPASNRLEDSEENSGRKTSGWG
PTKKSMEATTDELFSATLSPIVKTNVRRGLAFEEEEDTFMNIPKIATSTAINDIGDVSEE
AENPMETSGNSDIIVVTPPPPKPSSEINLDDSDIIDVTPLKAPPIKRGVAPVALAPPPPS
WSSQQSWNPNRQRAPSPVREDYTKLSVKELISKRNSAMALISHSEHLPDKGMTVIRKFQE
LDDEFERRKDAGINVYDTGSGDSDDCIVLDDSSDPPPPRRGVVDLPQKAFFSRRISPPRG
PAPPDFNAMLDKNNQKLMGGKMTDEKCRRVQLVTDRVVQQLADATHTIPAETDLTETPKG
FKIDLMPHQKSGLTWMIWRESQPQPGGILADDMGLGKTLSMISLISHQKSARIARKEAGG
GANEDEKEKRKIVKEAGLVPSNSTLIVAPASLIHQWEAEINRRLKDDALSIYMFHGTKKQ
RTIDARRLARYDVVITTYTLIANELIEKIKTKAKKGGVAEGEESEEDSDIEGADGDAVGH
AIRKKAIGKDDSPLAQICWSRVILDEAHAIKNRLSLCSKGVCRLSSFSRWCLSGTPIHNN
LWDLYSLIRFLRVPPFSDANYWKESIMPMKPIMADRVNLLTKNLLLRRTKEQTCAVTNKK
LVDLPLKTVEIHELEMEGDEKHAYLIMMNAAQKFVKKILQDSDDMRHLGFVRRHKKKAEE
FQNPFNFGPRNLEGGTNFEKMSYVLMLLLRLRQACVHFHITRKGMDIDAFQLSGGDETTD
LDELGEMMEKSMRMIDEERETQTTSDNNSKKIFEPEFLSCKMKKTLQILSNIVEKGEKVV
IVSQWTSVLELIEEHIKQYAIRYTSITGQIPVKDRQERVDSFNREVGGAKVMLLSLTAGG
VGLNLTGGNHLIMIDLHWNPALEQQAFDRIYRMGQKKPVFIHRLITKGTIEQRVVELQKS
KLTLASSVLDGTATRKMNKLTTADIKMLFNL
NT seq 2976 nt   +upstreamnt  +downstreamnt
atgatttcagtcaatttggagcacagaacggccatttctacgattttgctctccgagaaa
acggatttgcgatcgaaagcggctctccgggaacgtcttctcaggaaatcactgaaacca
gcgtcgaatcgattggaggattctgaagagaattctggaaggaagacatcgggatgggga
cccacgaagaagtcaatggaggcgactactgatgagttattcagtgccacgttgtctcct
attgtaaagacaaatgttaggagaggattggctttcgaagaggaggaagacacttttatg
aacattccaaaaatcgccacctccacagcgatcaacgatatcggcgatgtctcagaggaa
gctgaaaatccaatggaaacttctggaaattctgacataatcgtagtgacaccaccacca
ccgaaaccctcctcagaaatcaatctggacgatagtgacatcatcgacgtcacgcccctc
aaggctccgcccataaaaaggggcgtggctcccgtggctctggctccgcccccaccgtcc
tggagctctcagcagtcgtggaaccctaatagacagcgagcgccgtctccagtccgagag
gattatacgaaattaagtgtgaaagaattaatttcgaaaagaaattcggcgatggcgttg
atttctcactcggaacatcttcccgataagggaatgacggtgattcggaaatttcaggag
ctcgacgatgagtttgagagacgaaaagacgcgggaattaatgtatatgatacggggtct
ggggattccgatgactgtattgttctggatgactcttcggatcccccgcccccacgacgc
ggtgtcgttgatctaccacagaaggcgttcttctccagaagaatcagtcctccgagaggc
cccgcccctccggatttcaatgctatgcttgataagaataatcagaaattgatgggcgga
aagatgactgatgagaagtgtcgacgcgttcagttggtgactgatcgagttgtgcagcag
ttggccgacgcaacgcatacaataccggcagaaacagacctgacggagaccccaaaaggc
ttcaaaatcgacttgatgcctcatcaaaaatcgggtttaacgtggatgatatggcgggag
tctcaaccacaaccaggcggaattctagcagatgatatgggtctcggaaagactctctca
atgatttctcttatttctcatcagaaatctgcgagaatcgccagaaaagaagctgggggc
ggggctaacgaggatgagaaagaaaaacgaaaaatcgtaaaggaggcggggcttgttcca
tcgaatagtacactaattgtggcgccggcgagtctcattcatcagtgggaagctgaaatt
aatcgacggctgaaagatgatgcattatcgatttatatgtttcatggaacgaaaaaacag
aggacgattgatgcgagacggctggctagatatgatgttgtcattactacgtatacacta
attgctaatgagttaattgagaaaattaagacaaaggccaaaaaagggggcgtggccgag
ggggaggagtctgaagaggattcggatattgaaggcgctgacggtgacgctgttggccat
gcgattcgcaaaaaagccatcggaaaagacgactctcccctcgctcaaatctgctggtca
cgtgtgatcctcgacgaggcgcatgccatcaagaatcgtctctcgctgtgttcgaaaggt
gtctgccgtctctcgtctttctctcgatggtgtctttcgggtactccgattcacaataat
ctctgggatctctacagtctcattcgattccttcgtgtcccaccgttcagtgatgcgaat
tattggaaagagtcgattatgccgatgaaaccgattatggcggatcgcgtgaatttgctg
acgaagaatttgttgttacggagaactaaagagcagacgtgtgcggttactaataagaaa
ttggtggatttgccactgaaaacggtggagattcatgagttggaaatggagggagatgag
aaacatgcgtatcttattatgatgaatgccgcgcaaaaattcgtcaaaaagatccttcaa
gattccgacgatatgcgacatcttggattcgttcgtcgtcataagaaaaaggccgaggag
tttcagaatccatttaatttcggtccgcgtaatctggaaggcggtaccaacttcgagaag
atgtcatacgtgttgatgcttttgctccgccttcgtcaagcgtgtgtccattttcatatc
actcgaaaaggaatggatatcgacgcatttcaattgagcggtggagacgaaacgacagat
ttagacgaactgggagaaatgatggagaaatcgatgagaatgatagacgaggagagagag
acgcagacgacatcagacaacaactcgaagaaaatcttcgaacccgaatttttgagttgt
aaaatgaagaaaacactccagatactgtcgaatattgtcgagaaaggagagaaagttgta
attgtgtctcagtggacgtcagtattggaattaatcgaagaacacatcaaacaatacgcc
attcgatatacatcaatcaccggtcagattcctgtcaaagatcgacaagaacgtgtcgac
agtttcaatcgagaagtgggcggagccaaagtgatgctcttatcgttgacggccggaggg
gtgggactcaatttgactggtggaaatcatttgattatgattgatttgcattggaatccc
gctttggaacaacaggcattcgatcggatttatcgaatgggacaaaagaaacccgttttt
attcatagactcatcacgaaaggaaccatcgagcaacgtgtcgtcgaactccaaaagtcg
aagctcaccctcgcctcgtcggttctcgatggaacggcgactcgaaaaatgaacaaattg
acaacagccgacatcaaaatgttgtttaatctttaa

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