Caenorhabditis remanei (nematode): GCK72_003046
Help
Entry
GCK72_003046 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_003046
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
GCK72_003046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
9803897
NCBI-ProteinID:
XP_053592420
UniProt:
A0A6A5HSR0
LinkDB
All DBs
Position
I:13758741..13774963
Genome browser
AA seq
991 aa
AA seq
DB search
MISVNLEHRTAISTILLSEKTDLRSKAALRERLLRKSLKPASNRLEDSEENSGRKTSGWG
PTKKSMEATTDELFSATLSPIVKTNVRRGLAFEEEEDTFMNIPKIATSTAINDIGDVSEE
AENPMETSGNSDIIVVTPPPPKPSSEINLDDSDIIDVTPLKAPPIKRGVAPVALAPPPPS
WSSQQSWNPNRQRAPSPVREDYTKLSVKELISKRNSAMALISHSEHLPDKGMTVIRKFQE
LDDEFERRKDAGINVYDTGSGDSDDCIVLDDSSDPPPPRRGVVDLPQKAFFSRRISPPRG
PAPPDFNAMLDKNNQKLMGGKMTDEKCRRVQLVTDRVVQQLADATHTIPAETDLTETPKG
FKIDLMPHQKSGLTWMIWRESQPQPGGILADDMGLGKTLSMISLISHQKSARIARKEAGG
GANEDEKEKRKIVKEAGLVPSNSTLIVAPASLIHQWEAEINRRLKDDALSIYMFHGTKKQ
RTIDARRLARYDVVITTYTLIANELIEKIKTKAKKGGVAEGEESEEDSDIEGADGDAVGH
AIRKKAIGKDDSPLAQICWSRVILDEAHAIKNRLSLCSKGVCRLSSFSRWCLSGTPIHNN
LWDLYSLIRFLRVPPFSDANYWKESIMPMKPIMADRVNLLTKNLLLRRTKEQTCAVTNKK
LVDLPLKTVEIHELEMEGDEKHAYLIMMNAAQKFVKKILQDSDDMRHLGFVRRHKKKAEE
FQNPFNFGPRNLEGGTNFEKMSYVLMLLLRLRQACVHFHITRKGMDIDAFQLSGGDETTD
LDELGEMMEKSMRMIDEERETQTTSDNNSKKIFEPEFLSCKMKKTLQILSNIVEKGEKVV
IVSQWTSVLELIEEHIKQYAIRYTSITGQIPVKDRQERVDSFNREVGGAKVMLLSLTAGG
VGLNLTGGNHLIMIDLHWNPALEQQAFDRIYRMGQKKPVFIHRLITKGTIEQRVVELQKS
KLTLASSVLDGTATRKMNKLTTADIKMLFNL
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagtcaatttggagcacagaacggccatttctacgattttgctctccgagaaa
acggatttgcgatcgaaagcggctctccgggaacgtcttctcaggaaatcactgaaacca
gcgtcgaatcgattggaggattctgaagagaattctggaaggaagacatcgggatgggga
cccacgaagaagtcaatggaggcgactactgatgagttattcagtgccacgttgtctcct
attgtaaagacaaatgttaggagaggattggctttcgaagaggaggaagacacttttatg
aacattccaaaaatcgccacctccacagcgatcaacgatatcggcgatgtctcagaggaa
gctgaaaatccaatggaaacttctggaaattctgacataatcgtagtgacaccaccacca
ccgaaaccctcctcagaaatcaatctggacgatagtgacatcatcgacgtcacgcccctc
aaggctccgcccataaaaaggggcgtggctcccgtggctctggctccgcccccaccgtcc
tggagctctcagcagtcgtggaaccctaatagacagcgagcgccgtctccagtccgagag
gattatacgaaattaagtgtgaaagaattaatttcgaaaagaaattcggcgatggcgttg
atttctcactcggaacatcttcccgataagggaatgacggtgattcggaaatttcaggag
ctcgacgatgagtttgagagacgaaaagacgcgggaattaatgtatatgatacggggtct
ggggattccgatgactgtattgttctggatgactcttcggatcccccgcccccacgacgc
ggtgtcgttgatctaccacagaaggcgttcttctccagaagaatcagtcctccgagaggc
cccgcccctccggatttcaatgctatgcttgataagaataatcagaaattgatgggcgga
aagatgactgatgagaagtgtcgacgcgttcagttggtgactgatcgagttgtgcagcag
ttggccgacgcaacgcatacaataccggcagaaacagacctgacggagaccccaaaaggc
ttcaaaatcgacttgatgcctcatcaaaaatcgggtttaacgtggatgatatggcgggag
tctcaaccacaaccaggcggaattctagcagatgatatgggtctcggaaagactctctca
atgatttctcttatttctcatcagaaatctgcgagaatcgccagaaaagaagctgggggc
ggggctaacgaggatgagaaagaaaaacgaaaaatcgtaaaggaggcggggcttgttcca
tcgaatagtacactaattgtggcgccggcgagtctcattcatcagtgggaagctgaaatt
aatcgacggctgaaagatgatgcattatcgatttatatgtttcatggaacgaaaaaacag
aggacgattgatgcgagacggctggctagatatgatgttgtcattactacgtatacacta
attgctaatgagttaattgagaaaattaagacaaaggccaaaaaagggggcgtggccgag
ggggaggagtctgaagaggattcggatattgaaggcgctgacggtgacgctgttggccat
gcgattcgcaaaaaagccatcggaaaagacgactctcccctcgctcaaatctgctggtca
cgtgtgatcctcgacgaggcgcatgccatcaagaatcgtctctcgctgtgttcgaaaggt
gtctgccgtctctcgtctttctctcgatggtgtctttcgggtactccgattcacaataat
ctctgggatctctacagtctcattcgattccttcgtgtcccaccgttcagtgatgcgaat
tattggaaagagtcgattatgccgatgaaaccgattatggcggatcgcgtgaatttgctg
acgaagaatttgttgttacggagaactaaagagcagacgtgtgcggttactaataagaaa
ttggtggatttgccactgaaaacggtggagattcatgagttggaaatggagggagatgag
aaacatgcgtatcttattatgatgaatgccgcgcaaaaattcgtcaaaaagatccttcaa
gattccgacgatatgcgacatcttggattcgttcgtcgtcataagaaaaaggccgaggag
tttcagaatccatttaatttcggtccgcgtaatctggaaggcggtaccaacttcgagaag
atgtcatacgtgttgatgcttttgctccgccttcgtcaagcgtgtgtccattttcatatc
actcgaaaaggaatggatatcgacgcatttcaattgagcggtggagacgaaacgacagat
ttagacgaactgggagaaatgatggagaaatcgatgagaatgatagacgaggagagagag
acgcagacgacatcagacaacaactcgaagaaaatcttcgaacccgaatttttgagttgt
aaaatgaagaaaacactccagatactgtcgaatattgtcgagaaaggagagaaagttgta
attgtgtctcagtggacgtcagtattggaattaatcgaagaacacatcaaacaatacgcc
attcgatatacatcaatcaccggtcagattcctgtcaaagatcgacaagaacgtgtcgac
agtttcaatcgagaagtgggcggagccaaagtgatgctcttatcgttgacggccggaggg
gtgggactcaatttgactggtggaaatcatttgattatgattgatttgcattggaatccc
gctttggaacaacaggcattcgatcggatttatcgaatgggacaaaagaaacccgttttt
attcatagactcatcacgaaaggaaccatcgagcaacgtgtcgtcgaactccaaaagtcg
aagctcaccctcgcctcgtcggttctcgatggaacggcgactcgaaaaatgaacaaattg
acaacagccgacatcaaaatgttgtttaatctttaa
DBGET
integrated database retrieval system