KEGG   Caenorhabditis remanei (nematode): GCK72_003612
Entry
GCK72_003612      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq04136  Autophagy - other
crq04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:crq00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    GCK72_003612
   04136 Autophagy - other
    GCK72_003612
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:crq01002]
    GCK72_003612
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crq04131]
    GCK72_003612
   03029 Mitochondrial biogenesis [BR:crq03029]
    GCK72_003612
Peptidases and inhibitors [BR:crq01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   GCK72_003612
Membrane trafficking [BR:crq04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    GCK72_003612
Mitochondrial biogenesis [BR:crq03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    GCK72_003612
SSDB
Motif
Pfam: Peptidase_C54 Sulfotransfer_2
Other DBs
NCBI-GeneID: 9805799
NCBI-ProteinID: XP_053592790
UniProt: A0A6A5HYI8
LinkDB
Position
I:complement(17202667..17207518)
AA seq 674 aa
MMNSEVKQGVGMVETSLTSEPPFCDSFERISIDTFPIWALGRIINKEDGLEAMKKYMTSR
LWFTYRRDFSPIGGTGPSTDQGWGCMLRCAQMLLGEVLLRRHIGRHFEWDIEETSEVYEK
ILQMFFDEKDALYSIHQIAQMGVTEGKKVSEWFGPNTAAQVIKKLTIFDDWSNIAVHVAL
DNILVKEDALTMATTYPSDDAVKLIMENGQIEKPRPSSGCTTDWRPLLVMIPLRLGLTSI
NPCYLPAIQKFFELPQCVGIIGGKPNLAHYFVGIAGTKLFYLDPHHCRAKTAKRDAGVTT
NTMISSITTTDAQLDIQNQIDDSDFHKLEDLEPLPSQTSDVYTKMDDSTYHCQMMQWMEY
ESIDPSLALALFCETRQDFDTLCEELQKTTLPSSVPPMFEFLEKRPRYLPRFEPYTGVSM
KIEMKEFDDIGAANVKIDDDFEVLDVSVDENSSNTTTEKLKKVPKFYKLLNWEKKESEKK
LNNIEDLRRVNLNTLPNRTSNLSAVHLCSQNPSPCLPGLRDFEGEIRTAPRYHLSTCVVQ
KSMSTVMTSLFCYLRDEKKFIGNNREILKDWKIIRFCMFKNEFRNLGGLFKKINILPSAN
NWTHIMMVRNPIERFISGFVDKCYRKPVVSNYCNGCKKNLTCFMETELARMKEQVKRGKF
LKTYEDRHFFPQSW
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgatgaattctgaagtaaaacaaggcgttggcatggtggagacatctctcacttccgaa
ccaccgttttgtgatagtttcgagcggatttcaattgacacttttccgatttgggcactc
ggaaggattattaataaggaagatggtctggaagcaatgaagaagtatatgacatcgagg
ttgtggtttacttatcgcagagatttttctccaatcggtggtaccggtccgagtactgac
caaggttggggatgtatgttgagatgcgcacaaatgctgttaggagaggtactccttcgt
cgtcacattggaagacatttcgaatgggatattgaggagacgtcagaggtttatgaaaaa
attctgcaaatgttctttgatgagaaagacgcgttgtattcgattcatcaaattgcgcaa
atgggggtaaccgaggggaaaaaagtgtcggagtggtttggacccaacactgcagctcaa
gtcatcaagaaattgacaatctttgatgattggtctaatattgctgttcacgtggcattg
gataatatactggtgaaggaagatgcgttgacaatggctacaacttatccaagtgatgat
gcagtcaagttaatcatggaaaacggtcaaatcgagaaaccccgtccttcgtctggttgc
accactgactggagaccacttctcgtcatgatcccactccgactgggtcttaccagcatc
aatccgtgttacctcccagccatccagaagtttttcgagctaccacaatgtgttggaatc
atcggaggcaagccaaatctcgcacactatttcgttgggattgccggaactaagcttttc
tatctggatccacaccactgtcgtgcgaagactgcaaaacgggacgctggagtcacgacc
aataccatgatatcatccataactactacagatgctcagttagatattcagaatcagatt
gacgactctgacttccacaagcttgaggatttggagccgttaccatcacaaacgtcggat
gtctataccaagatggacgattccacgtatcactgtcaaatgatgcaatggatggaatat
gagagcattgatccatcgctagctttggcattgttctgtgaaacccgccaagactttgat
actctgtgtgaggaacttcagaagacaaccctcccatcctcagtaccccctatgtttgag
ttcctggagaagcgtccgagatacttgccacgatttgagccatataccggggtgagcatg
aaaatagagatgaaggagttcgatgacattggagcagcgaatgtgaaaatcgacgacgac
tttgaagttttggatgtgtccgtggatgagaattcgagtaacactacaacagaaaaactg
aaaaaagttcctaaattctataaattattgaactgggagaagaaagaatctgagaagaag
ttgaataacatcgaagatttgagacgagtaaatttgaatacgcttccaaaccgaacatcc
aacctttccgctgtccatttatgttctcaaaatccgtcgccatgtcttccagggctgagg
gacttcgagggggagattcggacagcccctcgataccatctatccacatgtgtagtccaa
aaaagtatgagtactgtaatgacgtcactattctgttatttgagagatgagaagaaattc
atcgggaataatcgagagattttgaaggactggaaaataattcgattttgtatgttcaaa
aatgaattcaggaatttgggtgggcttttcaagaaaattaacattttaccttccgcaaac
aactggacacatatcatgatggttagaaacccgattgagcgttttatctcgggatttgtc
gacaaatgttatagaaaaccagtggtgtccaattactgtaacggatgtaaaaagaatttg
acgtgttttatggagactgagttggcgagaatgaaagaacaagtgaaaaggggaaagttt
ttgaagacttatgaagatcgacacttttttccgcagagttggtga

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