Caenorhabditis remanei (nematode): GCK72_003627
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Entry
GCK72_003627 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14947
epithelial splicing regulatory protein 1/2
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crq03041
]
GCK72_003627
Spliceosome [BR:
crq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
GCK72_003627
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans_2
RRM_1
Ion_trans
Motif
Other DBs
NCBI-GeneID:
9810915
NCBI-ProteinID:
XP_053588352
UniProt:
A0A6A5HBC1
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Position
II:75442..89013
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AA seq
1017 aa
AA seq
DB search
MHPRGKFLAGHLSAFYITPATTAALISRNHNDWAHLQLLKRTPSSDAGNMNQVHFGTASA
RRRNAMILENNSGDGDDDDAPKEGFLANLRLALFHLVLIFATVAYIIAGAYLFTKIEHQA
ELDRYQSYHTIYRGFVENLFYQSSNRSSTDVENLIDTFTLINFRAFKEGLKPTVTEILLD
FLVPQETSRWSMISAIFFTTTVLTSIGYGNLIPISTGGKIFCVGYAIFGIPLTLVTIADL
AKFVADMLIMDPTEDPKTGRQLLVLVFLLGYMTISACVYTILEPMWSFLDSFYFCLVSLL
TVGFGDLYPTGTVEYMLCSIVFIFIGLILTTLAVDVSGSVGIAKMHSIGRGFDAMKMLNA
LRVRKSEFVAKGAVSLSAAARVAAGRRLDGQQPPSQQQPQQRLLLIRVSDSNYDENTKLV
VTSFYGPRRQEDANNNSTSSPSTTCTSFHNISTHFVNITPDDVIKFFDEHPTQSYIFSKG
PEPIRHVLIPLFVRNERYVPHQIHQYYDINHLFYQNVDENQMEEHESEQNLDDVEIAKSI
LELSDENLQKLQRTVQIDYRPAPILEEHNLGIDGDNVVCRARGLPWQASDQHVAQFFAGL
DIVPGGIALCLSSEGRRNGEVLVQFATQESRDLALKRHRNFLLSRYIEVYKAGLDEFMHV
ATGSSIEAMEFVSANAVIVRMRGLPYDCTDTQIRAFFEPLKLTDKILFITRTDGRPTGDA
FVQFETEEDAQKGLLKHRQIIGQRYIELFKSTAAEVQQVVKRCNLINSSPAVTNAVEAPE
EKKKDCVRLRGLPYEATVQHIVTFLGDFAQMVKFQGVHMVYNNQGNPSGEAFIQLISEAA
AAATAAGVHNNFMCVGKKKRYIEVFQSSAEELNLQHLVHQQPQLPPQPALGFLGHLPPPA
QVPQTQQIWSSYPSPPISPIVPGQVTQLIIYGIHMSIGVPELVANFTTPEHTVDNVLFTR
WPTHLCPGEAIITLRSRVAPPPQTAQTSPLSQVSQMSAYSHHYHSTHNFPLQPILME
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgcatccccggggaaagtttctggccggacatttgtccgctttctatatcactccggca
acaactgcggcactcatttctagaaatcataacgattgggcacatctacagttgctcaaa
aggacaccaagttcagatgccggaaacatgaatcaggtacacttcggaacagcttcggca
cggcgccgtaacgctatgattctagaaaacaacagtggcgacggagacgacgacgatgca
ccaaaagaaggattccttgcaaacctccgtcttgcattattccaccttgttctgatcttt
gccactgttgcctatattatcgccggtgcatatctgttcaccaaaatcgagcatcaagcg
gaattggatcgttaccagtcatatcatacaatctatcgaggcttcgttgagaacctcttt
tatcaatcctcgaatcggtcgtcaactgatgttgagaatctgattgacacctttacatta
ataaattttcgagcgttcaaggaaggattgaaaccaactgtgactgaaatacttctagat
ttcctcgtccctcaagaaactagtcgctggtcgatgatatccgcaatattcttcacaacg
acagtacttacctccatcgggtacggaaacctgattccaatctcaacaggtggcaaaatt
ttttgtgttggatatgcgatttttggtatcccgttaacgttggtgaccattgctgactta
gccaagtttgtagcagatatgttaataatggatccaacagaagatccaaaaacaggacgt
cagctgctggtgttagtgtttcttctgggctacatgactatctcagcctgtgtgtatacg
attttggagccaatgtggtcgtttttggattcgttttatttttgtttggtttcgttgcta
acggtcggatttggagatctctatccgactggtactgttgaatacatgctgtgctccata
gtattcatcttcatcggactcattctgaccacacttgcggtcgatgtgagtggatcggtt
ggaattgccaagatgcattctataggaagaggatttgatgctatgaaaatgttgaacgcg
ttacgtgttcgaaaaagtgagttcgtcgctaaaggggcggtctcattgtcggcggccgcg
cgggtggcggcgggtcgtcgtctcgacggtcaacagcccccatctcagcaacaaccccaa
caacgactactactcatacgagtatctgactccaactatgacgaaaatacaaagctagtg
gtcacttccttctacggaccacgtcgtcaagaagatgccaacaataacagtacttcctct
ccatcaaccacttgcacatcatttcacaacatatcaactcattttgtaaatatcactcca
gatgacgttattaaatttttcgacgagcatccaacccaatcatatatattctcgaaagga
ccggaacccattcgacatgttctcattcctttatttgtaaggaacgaacgatatgttccc
catcaaatacatcaatattatgatatcaatcatttgttttatcaaaatgtggatgaaaac
caaatggaagaacatgagtctgaacaaaatttggatgacgtggagattgctaaatctatt
ctggaattaagtgatgaaaaccttcaaaaactccaaagaactgttcaaatcgactaccga
ccggctccaattctcgaggaacataatttgggaatcgatggagacaacgttgtttgtaga
gcacgcggtcttccatggcaagcatcagatcagcatgttgctcagttttttgctgggtta
gatattgtgccaggaggaatcgccctttgcctctcatctgaaggtcgtcgaaacggtgag
gtgctcgtccaattcgccactcaggaatcccgagatttggctctgaagaggcatcgaaat
ttcctcttgtcacgatacattgaggtttacaaggctggattagacgaattcatgcatgtt
gctacaggctcttcaatcgaagccatggagtttgtgagcgcgaatgcggtcattgtcaga
atgcgtggacttccgtacgattgtaccgatactcaaattcgggcatttttcgaaccactc
aaactgacggataagattttgttcatcacgagaaccgatggacgtcctactggcgacgca
tttgtccaattcgaaaccgaagaagatgcacagaaaggactcttgaaacaccgtcaaatt
attggtcaacggtatatcgaacttttcaaaagtaccgctgcagaagtgcaacaagtcgtc
aaacgttgcaaccttatcaacagttctccagccgtcacaaatgctgtcgaggctccagaa
gagaagaaaaaggattgtgttcgtcttcgcggactcccttatgaagctacagtgcaacac
attgttacattcctcggagactttgcccagatggtaaagttccaaggtgtgcatatggtg
tacaataaccaaggaaatccatccggcgaagcgttcatccagcttatcagcgaagctgca
gccgccgccaccgccgccggtgttcacaacaatttcatgtgtgttggcaagaagaagcga
tacatcgaggtgttccagtcgtctgccgaggagttgaaccttcaacacttggttcatcaa
caaccacaacttccaccacaaccggctctcggattcttagggcatctcccaccaccggct
caggttccacagacccagcagatttggtcgagttatccatctccgccgatttcacccatt
gtgccagggcaggtcactcagttgattatttacgggattcatatgagcatcggggtgcca
gagcttgtcgctaacttcaccactccggagcacactgtggataatgttctattcacccgc
tggccaactcatctctgtccaggagaggcgattatcacacttcgtagccgtgttgctccg
ccacctcaaactgctcaaaccagtccgttatcccaagtttcgcaaatgtctgcgtattct
catcactatcattcaacacacaacttcccacttcaacccattcttatggaatag
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