Caenorhabditis remanei (nematode): GCK72_003629
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Entry
GCK72_003629 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_003629
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
90S particles
Other 90S particles
GCK72_003629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
MCCA_BT
Motif
Other DBs
NCBI-GeneID:
9810917
NCBI-ProteinID:
XP_053588353
UniProt:
A0A6A5HA30
LinkDB
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Position
II:complement(94114..99949)
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AA seq
512 aa
AA seq
DB search
MPSFFVKTTGKKKVQGGRKRKQIGGKSDGKSDELAAKMTRRQKLMAATEIHSDEEDPFAR
SASGSEAGSDVEYEDVHERNYREAKNLLEKIQSSVATEEEVSEKLRDDALAKTGTLMKRV
ADVVELEDDLEISYKAHRLTPLCVAFSPDANYVISSGKESSIVKYNVKTRKVVGVIKRTK
KRAGAPEEPTHAHYGVIYAVAVSPDQKFIASGGYDQIVKIWNFDSLDHIKDLSGHRGPIF
SLAFQLRTNNLFSSSQDRSVKMWDIDQLGLVDTMYGHQDGVQQIGVLSKQRVATVGGRDR
TARLWKVEDESQLMFTGLSNCVSLDCVAMINEEHFATGSADGSIALWSFWKKRPIHVRKQ
AHGQETSGNGRWIVALAVLPYSDLLASGSNEGELKLWKIAENFRTLTPFFSYTIPGFINS
INFAPNGKSIVVGAGKEHKDGRWWVDREARNQVVILPIRYTDESDDVVTNGEMASGTNSM
SDGVKGIESGDSDDDEVVSETDYEGEDEGKEE
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgccatcatttttcgtgaaaaccactggtaagaaaaaagtgcaaggaggacgaaaacgc
aagcagattggtggaaaatccgacggaaaaagcgatgaattagcggcgaagatgacgaga
agacagaaattgatggctgcgaccgagattcattccgacgaggaggatccctttgctaga
agtgcctccggatcagaagctggaagtgatgtggaatatgaagatgtacacgaaagaaac
tatcgagaagcgaagaatcttctggagaaaattcagagttcggtagccacagaagaggag
gtttctgaaaaactgagggatgatgcgttggcgaagacgggaacactgatgaaacgagtc
gctgacgtcgttgagttggaggatgatttagagattagttataaggcacatagattaaca
ccactttgcgtcgctttctctccagatgccaactatgtgataagtagtggaaaagagtcg
agtattgttaagtacaatgtgaaaactcgaaaagtggtcggagtcatcaaaagaaccaaa
aagagagctggagcaccggaagagccaactcatgctcattatggagtcatctacgcagtc
gctgtgtccccggatcaaaaattcatcgcttctggaggctatgaccagattgtcaagatt
tggaactttgactcattggatcacatcaaggatctctccggtcatcgcggaccgattttt
tcattggcattccaactgagaaccaacaacttgttctcgtccagtcaggatcgttcagta
aaaatgtgggatatcgatcagttgggtctggtggacactatgtacggacatcaggacggt
gttcaacagattggagtgttgtcgaagcagagagtggcgactgtcggtggacgtgatcgt
accgctcgtttgtggaaggttgaggatgagagtcaattgatgtttactggactctccaac
tgtgtcagtttggattgtgttgctatgatcaatgaggagcactttgccactggatctgct
gatggaagtatcgcactgtggtcattctggaagaagcgtccgattcacgttagaaagcaa
gcacacggacaagagacgagtggaaatggacgatggattgtcgcgttggcagtgttgccg
tattctgacctactcgcatctggatccaacgaaggagagttgaaattatggaaaatcgct
gagaacttccgcacgttgacaccattcttctcgtatactatacccggatttatcaattct
atcaatttcgctccaaacggaaagtcaattgttgttggagcaggaaaagagcataaagat
ggaaggtggtgggttgatcgtgaggctcgtaatcaagtggtaatccttccaattcgatac
actgatgaaagtgatgatgtcgtgactaatggggaaatggcgtctggaacaaatagtatg
tcggatggagtgaagggaatcgaatctggagattcggatgatgacgaagtcgtgtcggaa
accgactacgagggagaagatgaggggaaggaagaatag
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