KEGG   Caenorhabditis remanei (nematode): GCK72_003629
Entry
GCK72_003629      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K14793  ribosomal RNA-processing protein 9
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:crq03009]
    GCK72_003629
Ribosome biogenesis [BR:crq03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    GCK72_003629
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_SPT8 MCCA_BT
Other DBs
NCBI-GeneID: 9810917
NCBI-ProteinID: XP_053588353
UniProt: A0A6A5HA30
LinkDB
Position
II:complement(94114..99949)
AA seq 512 aa
MPSFFVKTTGKKKVQGGRKRKQIGGKSDGKSDELAAKMTRRQKLMAATEIHSDEEDPFAR
SASGSEAGSDVEYEDVHERNYREAKNLLEKIQSSVATEEEVSEKLRDDALAKTGTLMKRV
ADVVELEDDLEISYKAHRLTPLCVAFSPDANYVISSGKESSIVKYNVKTRKVVGVIKRTK
KRAGAPEEPTHAHYGVIYAVAVSPDQKFIASGGYDQIVKIWNFDSLDHIKDLSGHRGPIF
SLAFQLRTNNLFSSSQDRSVKMWDIDQLGLVDTMYGHQDGVQQIGVLSKQRVATVGGRDR
TARLWKVEDESQLMFTGLSNCVSLDCVAMINEEHFATGSADGSIALWSFWKKRPIHVRKQ
AHGQETSGNGRWIVALAVLPYSDLLASGSNEGELKLWKIAENFRTLTPFFSYTIPGFINS
INFAPNGKSIVVGAGKEHKDGRWWVDREARNQVVILPIRYTDESDDVVTNGEMASGTNSM
SDGVKGIESGDSDDDEVVSETDYEGEDEGKEE
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgccatcatttttcgtgaaaaccactggtaagaaaaaagtgcaaggaggacgaaaacgc
aagcagattggtggaaaatccgacggaaaaagcgatgaattagcggcgaagatgacgaga
agacagaaattgatggctgcgaccgagattcattccgacgaggaggatccctttgctaga
agtgcctccggatcagaagctggaagtgatgtggaatatgaagatgtacacgaaagaaac
tatcgagaagcgaagaatcttctggagaaaattcagagttcggtagccacagaagaggag
gtttctgaaaaactgagggatgatgcgttggcgaagacgggaacactgatgaaacgagtc
gctgacgtcgttgagttggaggatgatttagagattagttataaggcacatagattaaca
ccactttgcgtcgctttctctccagatgccaactatgtgataagtagtggaaaagagtcg
agtattgttaagtacaatgtgaaaactcgaaaagtggtcggagtcatcaaaagaaccaaa
aagagagctggagcaccggaagagccaactcatgctcattatggagtcatctacgcagtc
gctgtgtccccggatcaaaaattcatcgcttctggaggctatgaccagattgtcaagatt
tggaactttgactcattggatcacatcaaggatctctccggtcatcgcggaccgattttt
tcattggcattccaactgagaaccaacaacttgttctcgtccagtcaggatcgttcagta
aaaatgtgggatatcgatcagttgggtctggtggacactatgtacggacatcaggacggt
gttcaacagattggagtgttgtcgaagcagagagtggcgactgtcggtggacgtgatcgt
accgctcgtttgtggaaggttgaggatgagagtcaattgatgtttactggactctccaac
tgtgtcagtttggattgtgttgctatgatcaatgaggagcactttgccactggatctgct
gatggaagtatcgcactgtggtcattctggaagaagcgtccgattcacgttagaaagcaa
gcacacggacaagagacgagtggaaatggacgatggattgtcgcgttggcagtgttgccg
tattctgacctactcgcatctggatccaacgaaggagagttgaaattatggaaaatcgct
gagaacttccgcacgttgacaccattcttctcgtatactatacccggatttatcaattct
atcaatttcgctccaaacggaaagtcaattgttgttggagcaggaaaagagcataaagat
ggaaggtggtgggttgatcgtgaggctcgtaatcaagtggtaatccttccaattcgatac
actgatgaaagtgatgatgtcgtgactaatggggaaatggcgtctggaacaaatagtatg
tcggatggagtgaagggaatcgaatctggagattcggatgatgacgaagtcgtgtcggaa
accgactacgagggagaagatgaggggaaggaagaatag

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