Caenorhabditis remanei (nematode): GCK72_004618
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Entry
GCK72_004618 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03253
translation initiation factor 3 subunit B
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_004618
03012 Translation factors [BR:
crq03012
]
GCK72_004618
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
GCK72_004618
Translation factors [BR:
crq03012
]
Eukaryotic type
Initiation factors
eIF-3
GCK72_004618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
JmjN
CTP_synth_N
Motif
Other DBs
NCBI-GeneID:
9803041
NCBI-ProteinID:
XP_003104224
UniProt:
E3MHT9
LinkDB
All DBs
Position
II:5070019..5073559
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AA seq
725 aa
AA seq
DB search
MVEIEFNKENEEDFSDPPDFVDDVTDEVLVPDMLYKRPTIEEFEDNIVFIAGIPVVGADR
IGRLQSVLKKVLEKMDPAVKLFIPTNSEGGSVGVLLTEWPDYRAAAFAVKSLEGYSFDKN
HQFSARFFTDMKKLQAPAEDWQTPTKSEYADVGDLWWWLQNERCRDQFAISHDKLGVPTV
GIFTNMKGNDPELAGDPDKAERANWTETVFTWSPHGSYLSTIHKRGIILWGGRDYARAHR
FAHENVQYIDFSPCETFLVTYAAPEETNSWGDYEKDSVRVWDVRTGELKKAYSTFELTGR
TQLPTWPFFKWSFDEKFFACLKAPEKDKLERERKVDGISIFASEDFELVEQRSVVIENIK
HFDWSPTATILAYYSECTDAVPAEFGLLQVPSMQRLRSARVHNVADAQMFWQKSGKRLAF
YTMRYKKKEFRETGEVKYVGGCQCHVDIFEIDKKDVSLMNLPLSEPFIHFDWDPEGDKFC
VLVGNNAKATPQVYRIEANSHAPKLISKLDAGVHFNEVQFAPKGGWLAVLAKVSAGGNVY
FIDTSLAEAKRTNVIEHPLFNKGYWDPTGRYFATCSTLGGRAGADLGYRIFTFQGRELCR
KNLDRLAQFKWRPRPPVKLSEQKQKEIKKNLKKTAAKFIKQDDDEKCRASQEVVEKRRKI
MAAFDIIRNRNREQLEATREQRIALRKGVDTEAPLDEDDFVDEEITIALSTSKTPAPLTE
EEERD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaaattgaatttaataaggagaacgaggaggatttctccgatccaccagatttt
gtcgacgatgttaccgatgaagttctcgtgcccgatatgctttacaagcgtccaacaatc
gaagaattcgaagacaacatcgtattcatcgccggtatcccagtcgtcggtgccgatcgt
attggtagacttcaaagtgtgctgaagaaggttctggagaagatggatcccgctgtgaag
cttttcattccaacaaactcggaaggaggctcagtgggagtccttctcaccgagtggccg
gactaccgagccgccgcgttcgccgtcaaatctcttgaaggatattcttttgacaagaac
catcagttctccgctcgttttttcactgatatgaagaagttgcaggcgccggcggaagac
tggcagacacccaccaaatcagagtacgctgacgtcggagatttgtggtggtggttgcag
aatgagcgttgtcgtgatcaattcgcgatttctcacgataaattgggcgttccgactgtc
ggaatcttcaccaatatgaagggaaacgatccggaactcgctggagacccggataaggct
gagagagctaactggacagaaaccgtgttcacctggtcaccacacggctcgtacctctcg
acaatacacaagcgaggaatcattctttggggtggaagagactacgctcgtgcgcatcgt
ttcgcccacgagaacgtgcaatacattgacttttcgccgtgcgagacgttcctcgtcacc
tacgccgctccagaagagacgaacagttggggagactacgagaaggacagtgtgagagtt
tgggacgttcgaaccggcgagttgaagaaagcctattcgactttcgagctgacaggaaga
actcagttgccaacgtggccgttcttcaaatggtcgttcgatgagaagttcttcgcgtgt
ttgaaggctccggagaaggataagctggaaagagagcgaaaagtcgacggaatctcaatt
ttcgcttctgaagactttgagctcgtcgagcaacgaagcgtcgttattgagaatatcaag
cacttcgactggtcaccaacagccaccatccttgcctactactctgagtgtactgacgcc
gtgccggctgaattcggtttgctgcaagtgccatctatgcagagacttcgttcggcacgt
gtgcacaacgtggcggacgctcagatgttctggcagaagagtggaaagagattggcgttt
tatacgatgagatataagaagaaggagttcagagagaccggagaggtcaagtatgtgggc
ggttgccaatgccacgtcgacatctttgaaatcgacaagaaggacgtctcccttatgaat
ctcccgctctccgaaccattcatccacttcgattgggatccagaaggcgacaaattctgt
gttctcgtcggaaacaacgccaaggcgacaccgcaagtctacagaatcgaagcgaacagc
cacgctcccaagctcatcagcaaattggacgccggagttcacttcaacgaggttcaattc
gcaccgaaaggagggtggttggcagttcttgccaaggtttcagccggtggaaatgtctat
ttcattgatacctcactggcagaggccaagagaaccaacgtcattgagcatccactcttc
aacaagggatactgggatccaactggccgttactttgccacttgctccacactcggaggc
cgcgccggagcagatctcggctacagaatcttcacattccaaggtcgtgaactgtgccgg
aaaaacttggatcgtcttgcacaattcaagtggagaccacggccacctgtgaagctcagt
gagcagaagcagaaggagatcaagaagaatttgaagaagaccgccgccaaattcatcaaa
caagacgacgatgagaagtgtcgtgcctcccaagaagtcgttgagaagcgtcgcaagatt
atggccgccttcgatatcattagaaatcggaatcgcgagcagttggaggcgacacgcgag
cagcgtatcgcgttgagaaaaggagtggacaccgaggcgccactcgacgaggacgatttt
gtggatgaggagattaccatcgcgttgagcaccagtaaaacaccggcacctctcactgag
gaggaggagagagactaa
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