Caenorhabditis remanei (nematode): GCK72_004760
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Entry
GCK72_004760 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GCK72_004760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_004760
Enzymes [BR:
crq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GCK72_004760
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
GCK72_004760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DNA_pol_B_palm
Motif
Other DBs
NCBI-GeneID:
9800867
NCBI-ProteinID:
XP_053589071
UniProt:
A0A6A5HAG5
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All DBs
Position
II:complement(<5898148..>5899713)
Genome browser
AA seq
521 aa
AA seq
DB search
MSSTKVLGVSQPISLAAPSQKDISLDKSLNEYLKTRKCFESKDETFQRVKTLSKLNLLVK
KWIKSLTDVRIPNGRQVDAGGKLMAFGSYRLGVHSSGADIDTVIIAPRHVTRMDFFTSFK
QILMKDPNVKELQAVENAFVPIITMSYSGIELDVLFARLDQPTIPENIDLSDDSLLVNLD
ESSIRSLNGIRVAEQLLKLVPNQDTFRQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVA
RTCQLYPNAAPSKIIQKVFFVFSTWKWPSPVVLKQFGCVDSKLANLNKLIWNPRKNVADR
YHLMPILTPAFPEQNSTHNVSKSTLHIIQEEMKSALEICNRIQEGNATWNDLFEEINFFS
RYKHFVALTINEDTNIGFFESKIRQLVQIMERNCQVKIAHINPRKLKNNRNESTWFLGLE
FTENAKNLDLTSEIEGFKRNMARHQAKGIVGQIQLDATYVKRSDLIKFISLGDLKRGRFV
NKTAVNRKRPASSGDSRETKKPRVIDMSAVDSILLKLKHNQ
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctaccaaagtactcggagtatctcaaccaatctctctggcagctccaagtcaa
aaggatatttcactcgacaagtcgctgaatgaatatctcaagacgcgcaaatgtttcgaa
tctaaagatgaaacctttcaacgtgtcaaaactctttcgaaactcaatctattggtcaag
aaatggatcaaaagtctcacagatgtacggattccaaatggaagacaagtggatgcaggt
ggaaaactgatggcgtttggttcttatcgtctcggagttcacagctctggagccgatatc
gatacagttatcattgctccacgacacgtcactcgcatggatttcttcacttctttcaaa
caaattcttatgaaggatccaaatgtgaaggagttgcaagcagtcgagaatgccttcgtg
ccgattataacgatgagttactctggaatcgaactcgacgtgttattcgcaagactcgat
cagccaacgatcccagagaatatcgatttatcagatgactcccttctcgtgaatttggat
gaatccagtatcagaagtttgaatggaattcgagtggctgagcagcttttgaagcttgtt
ccaaatcaagatactttccgtcaatcactcagagcaatcaagttatgggcgaagaatcat
ggagtatactcgaatgcaatgggttttttcggaggcatcacctgggctattctggttgca
aggacgtgtcaattgtatccaaatgcagctccatcgaagataattcaaaaggttttcttc
gtgttttcgacatggaaatggccatctcccgttgttctgaagcagtttggttgtgtggat
tcaaaattggcaaatctgaataaattgatttggaatccgcgaaaaaatgtagccgatcga
tatcatctgatgccaattctgactccagcgttcccggaacagaattccactcacaacgtc
tcgaaatcaactctccatataattcaagaggaaatgaagtctgcattggagatttgtaat
cggattcaagagggaaatgccacgtggaacgacctgttcgaagagatcaatttcttcagt
cgatacaaacatttcgtcgctttgacaatcaacgaggacaccaatattggattctttgaa
tcgaaaatccgccaattggttcagattatggagaggaactgtcaagtgaaaatagctcac
atcaatccaagaaaactgaagaacaatcgaaatgaatccacttggttcctgggattggag
tttacggagaacgcaaaaaacttggatttgacgtctgaaattgaaggattcaaacggaat
atggcaagacatcaggcaaaaggaatagtaggtcaaatacagttggatgccacgtatgtc
aaaagaagtgacctcatcaaattcatttctctcggagatttgaaacgaggacgatttgtg
aacaagactgctgtcaatcggaaacgtccagcttcatctggagactcgagggagactaag
aagccacgtgtcatcgatatgtctgcagtggattcaatcttgctcaagttgaaacacaat
cagtaa
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