Caenorhabditis remanei (nematode): GCK72_005093
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Entry
GCK72_005093 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04137
Mitophagy - animal
crq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GCK72_005093
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
GCK72_005093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_005093
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_005093
04131 Membrane trafficking [BR:
crq04131
]
GCK72_005093
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crq04147
]
GCK72_005093
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GCK72_005093
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
GCK72_005093
Membrane trafficking [BR:
crq04131
]
SNARE
SNARE associated proteins
Others
GCK72_005093
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GCK72_005093
Exosome [BR:
crq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GCK72_005093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
RNA_helicase
AAA_28
NPHP3_N
Mg_chelatase
Parvo_NS1
nSTAND3
IstB_IS21
ABC_tran
AAA_18
Vps4_C
AAA_7
AAA_25
ATPase_2
ResIII
AAA_lid_PRS2_C
Sigma54_activ_2
NACHT
TsaE
DUF815
Viral_helicase1
NB-ARC
AAA_17
Rad17
bpMoxR
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
9821547
NCBI-ProteinID:
XP_003117518
UniProt:
E3LGU5
A0A6A5HDX0
LinkDB
All DBs
Position
II:complement(7400571..7403163)
Genome browser
AA seq
812 aa
AA seq
DB search
MAQVPVQKDEKEKRNDELSTAILKDKSRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRG
DSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSAQLEYGKRIH
VLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETEPAPACI
VAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGV
KPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEK
NSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDG
ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLAEDVDLEQVANECHGFVGADLASLC
SEAALQQIREKMELIDLEDDSIDAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTT
WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC
QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGG
AADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQ
IFKASLRKTPLAADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQD
RRARGEELMEDETADPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNN
FKFPGEAPAGQPVGGNGGGAGAGGNDDDDLYN
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagttcccgtccaaaaggatgagaaagaaaagaggaatgatgagctgtcgaca
gccatcctcaaggataagtccagacctaatcgtttgattatcgatcagtctgataatgat
gacaactcgatggtgatgctttctcaagcaaagatggatgagttgggtcttttccgtgga
gattcagttattctgaaaggaaagaagagaagagagacggtttctatcgtactgaatgct
gataactgcccgaacgataagatcaagatgaacaaggttgtacgaaacaacctcagaagt
cgtctcggagacgttgtgagtatctccagtgcccagctggaatacggaaagagaattcat
gttctcccaattgatgacaccatcgagggattgactggaaacctgttcgatgtattcctt
cgtccatacttcactgacgcttaccgtccagttcacaaaggagacatattcactgtgcaa
gctgccatgagaactgttgagttcaaggttgtcgagactgagccagcaccagcttgcatt
gtagctccagacactgtcatccactacgaaggagatccgatcaaaagagaagaagaggaa
gaggctcttaacgaggtcggatacgatgaccttggaggagttcgcaagcagctcgctcag
attaaggaaatggttgagctcccacttcgccatccacaacttttcaaggctattggagtg
aagccaccacgtggaattcttctcttcggaccaccaggaaccggaaagactttgatcgca
agagctgttgctaacgagaccggagcattcttcttcctcatcaatggaccagaaatcatg
tccaaaatgtcaggagaatctgagtctaacttgagaaaggcattcgctgaatgcgagaag
aattctccggctatcctcttcattgatgaaatagacgcaattgctccaaaaagagaaaag
gctcacggagaagttgagaagcgtattgtctcccagctcctcactcttatggatggactt
aaaactcgtgctcatgtcgtcgtcatcgctgctactaaccgtccaaactcgattgacgga
gctcttcgtcgtttcggacgtttcgaccgtgaaatcgacattggaatcccagatgctgtt
ggacgtctcgaaattctgagaattcacaccaagaacatgaagttggctgaggatgttgat
ttggagcaagtcgcaaatgagtgccacggtttcgtcggagctgatttggcttcactttgc
tctgaagctgctcttcaacaaattcgtgagaagatggagcttattgatttggaggacgac
tcgattgacgcagaggtcttgaactcattggctgttaccatggaaaatttcagattcgcc
atgggcaaatcttccccatctgctcttcgcgaggcggtcgtagagacaccgaacaccaca
tggtccgatatcggaggactccaaaacgtcaagcgcgagcttcaagagcttgtccaatac
ccagtcgagcatccagaaaagtacctcaagttcggtatgcaaccatctcgtggagttctg
ttctacggaccaccaggatgcggtaaaactctcctcgccaaggctatcgccaacgaatgc
caagctaacttcatctctatcaagggaccagagcttcttaccatgtggttcggagagtct
gaagccaacgttcgtgatgttttcgataaggctcgtgctgctgcaccatgtgttctcttc
ttcgatgaacttgattcaattgccaaggctagaggaggaagtgttggagatgctggaggt
gctgctgatcgtgttattaaccaagtccttactgaaatggacggaatgaacgccaagaag
aatgtgttcattattggagccactaatcgtccagatatcattgatccagctgttcttcgt
ccaggacgtctcgatcaactcatctacattccacttcctgatgaggcttctagacttcaa
atcttcaaagccagtcttcgcaagaccccactcgctgctgatctcgacttgaacttcctt
gccaagaacaccgttggattctcaggagctgatttgaccgaaatttgccaacgtgcatgc
aaacttgccatccgtgagtcgatcgagcgtgagattcgtcaggagaaggagcgtcaagac
cgaagagctcgtggagaagagcttatggaggacgagactgctgatccagtgccagaaata
accagagctcacttcgaggaggcgatgaagttcgctagacgatcagtcaccgacaacgat
atcagaaaatatgaaatgttcgcccagactcttcaacagtcccgtggattcggaaacaac
ttcaagttcccaggagaggctccagctggacaaccagtgggaggaaacggtggtggtgct
ggtgccggtggaaacgatgatgatgatctttacaactag
DBGET
integrated database retrieval system
