Caenorhabditis remanei (nematode): GCK72_005141
Help
Entry
GCK72_005141 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GCK72_005141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crq03000
]
GCK72_005141
03021 Transcription machinery [BR:
crq03021
]
GCK72_005141
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_005141
Transcription factors [BR:
crq03000
]
Eukaryotic type
Helix-turn-helix
ARID
GCK72_005141
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
GCK72_005141
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
GCK72_005141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
9822146
NCBI-ProteinID:
XP_053589246
UniProt:
A0A6A5HDS4
LinkDB
All DBs
Position
II:complement(7581267..7585687)
Genome browser
AA seq
1254 aa
AA seq
DB search
MESRKRKSELELYIDKLTDPPEKQRKMAEFYNSLRMFYKRRWNAQLKLPHVQGVEVNLYR
LYDTVMALGGWQKVAAGDKWSDIAEMFGCKDDILCGDHAIKIIYMRYLSKFEQVETIGDV
DDYVDNEMSRSRGRNATSFFATNDCPISYNRNHLDQQLRDERGQIINDPDYARLTKSLIS
GLPNEIDFAMNVCMLLSHAGPKQLRISHAPTLLTLLVAHTGVYDEDDKTMLELGQDWKRS
TRHNFRSFWASSGVPLDLLMTFLDREIESEYVEDDDEFFTSVSNAFNVKDSRCWRLNQVT
TIIRNLSFESANRVTIVKTWPVMKFLIMCASCKWSPLYVAALDALSNLATDIDLADKTLV
YISQHAILRIITDGIFSMDKFKLIRSLEILTGLCGFEGNESIICDWLKPETIAHIFEIVG
VKDIMMCVYTLECLYQISEMGDAACDMLSESAKAIQQLVSMATLEAVSFGPAGLAGMKVV
EYQPNFQQPAAHPQQAQIHQVPHPQMNQQYGGGHHPNARMQPGPSHNHHPQHNHHQQMSH
QGTPAAQAPPMTVRQVIQNNLALQQVQREQMNREQHSQHHSQGGYPQSNGLRFDRRSGNI
TVRPIAPSATPGDSQLEQLTERWIKQNCVFEPAMSTARGELYAAYVDDLRNLYHSMSGSL
AMFSGVMKNLYPDVNFRMAPNGVMIVAQGIRLVRPHRLAPAGSSQTPMPTPQVDSNPLMR
KMLMSEPEPPVENGVLVNGHATESTEPVEQSKQSTKITIEQNKEEKKEKTPKVEDQQESS
VDVAAPSSDVEKKEEKAHPMTNGTIEVCQEPIKAAELFDGIENTQTEGKEVSIEIHDQFV
NESDNMKEETEKVNGMCNGHSKPKKESVASRAAHIVAVAAACNGDLEKMNGDPVCNGNKE
GEDKEETKEDSVKETDEGEEVEKEKEEEASKEVSTDLETTKRKCVPVASTVTDYMCDWDC
CSLYYSSSSHVLKHLSEDHVAEDLRLLCRWNGCCDPTPRNRWSLITHIQDTHCNETQLKL
GAQKRRDGTAIARPMQRPDIVPRDLSNHPGYAKNAAYEAIRRHALNFLTRELTEEPEGPV
TKSIRLTSCLILRNLARYSSDGRQKLRRHESHICVLALSRLESSHALCQLLSELHQTPSA
EEEQQKSLSQAPSSASLSSMGGSSSQLPTVPDSPTPTTTMKTPFRKPSAVNRPIAPVNRM
LNFSSFTATPDKPSTSSPAPFVSPSHRHQTIQQHLPTQPSPLVQTTPLRAGAGI
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcgaaaacggaaatccgagctagagctctacattgacaaattgacagatccg
ccggagaaacaaagaaagatggccgaattctacaacagtctccgaatgttttataaaagg
cgatggaatgcacaactgaaacttccacatgttcaaggagtcgaagtgaatctctatcgt
ctttacgacaccgtgatggcattgggtggttggcaaaaagtggccgctggtgataaatgg
tccgatatcgcagagatgtttggttgtaaagacgatattttgtgtggtgatcatgctatc
aaaattatctatatgaggtatttatcaaaattcgaacaagttgaaactatcggcgatgtt
gatgattatgtggataatgaaatgtcgagaagtcgtgggagaaatgccacatcgttcttc
gccaccaatgactgtccgatcagttataatcgaaatcatttggatcagcaactgagagat
gaaagaggacaaattatcaatgatccggactatgccagactcacaaaatcgttgatatca
ggactaccgaatgaaattgattttgcaatgaatgtctgtatgctattatcacacgcgggt
ccgaaacaattgagaataagtcatgcaccgacacttcttaccttgctggttgcgcatacg
ggtgtctatgatgaagatgacaagacaatgttggaattaggacaagactggaaaagaagc
acacgccataacttccgaagcttctgggcgtcttctggtgttccattggatttgttaatg
acgtttttggatcgagaaatcgaatcagaatacgttgaagacgacgatgaattcttcact
tccgtctccaacgcatttaatgtaaaagattcgagatgttggcgtctcaatcaagtcaca
acgataattcgaaacctgtcatttgagtctgccaatcgagtcactattgttaagacatgg
ccggttatgaaattcctgattatgtgcgcatcttgcaaatggtctccgctttatgttgct
gctcttgatgctcttagtaacttggcaactgatatcgatctcgccgacaaaacactggta
tacatttctcaacacgcaatacttcgcataatcactgatggaatattcagtatggacaag
ttcaaacttatacgatctttggaaattttgactggcctttgcggtttcgaaggcaacgaa
tcaatcatttgtgactggttgaagcccgaaacgatagctcatatatttgaaattgtcgga
gtgaaagacattatgatgtgtgtctacactctcgaatgcctctaccaaatctcggaaatg
ggtgacgccgcttgtgatatgttgtccgagtcggcgaaagcaattcaacaattggtctct
atggcaacactggaagctgtctcattcggtcctgccggtctagctggaatgaaagttgtc
gagtatcaaccgaatttccaacaacccgctgcccatccccagcaagcacaaattcatcaa
gtgccacaccctcaaatgaatcaacaatatggaggaggacatcatccgaatgctcgtatg
cagccaggcccaagtcacaatcaccatccacagcataatcatcatcaacaaatgagtcat
caaggaactcctgcagcacaagcacctccgatgactgttcggcaagttatacagaataat
cttgcacttcaacaagtacaaagagagcaaatgaatcgagaacaacatagtcaacatcat
tctcaaggtggatatccccaatcgaatggattgaggttcgatcgtcgcagtggaaatatt
accgtccgtccgattgctccatctgctaccccgggagacagtcaacttgaacagctgaca
gagaggtggataaaacaaaactgtgtgtttgagccagcgatgtcgactgcacgtggagag
ctgtatgctgcttacgtggatgatctcagaaatctgtatcattcgatgagtggaagtctc
gcgatgttcagtggagttatgaagaacttgtatccggatgtgaattttcgaatggctcca
aacggggttatgattgtcgctcaaggaattcgcctagttcggccgcaccgtctcgctcca
gcaggttcttctcaaacaccgatgcccacaccacaagtagattcgaatcctttgatgaga
aaaatgttgatgtcagagcctgaaccacctgtcgaaaatggtgtgttagttaatggacac
gcaacggaatctactgaaccagttgagcagtctaagcagtctacgaagattaccattgaa
caaaacaaagaagagaaaaaggagaagacaccgaaagtagaggatcagcaagaatcgtcg
gtagatgtagctgctccatcttctgatgtagagaagaaagaagaaaaggcacatccgatg
acgaacggaacaattgaagtgtgtcaggaaccgatcaaagcggcagaactgttcgacgga
atcgaaaatactcaaacggaaggaaaggaagtgtcgattgagattcacgatcagtttgtg
aacgaatcggacaacatgaaagaagaaactgaaaaagtgaacggaatgtgcaacggacac
tcgaaaccaaagaaggagtctgtggcaagtcgtgctgctcatattgttgcggtagcggct
gcgtgtaatggtgatttggagaagatgaatggagatccagtatgtaatgggaataaagaa
ggagaagataaagaagagacgaaggaagattcagtgaaagaaacagatgaaggagaggaa
gttgaaaaggaaaaagaagaggaggcttcaaaagaagtatccactgatcttgaaactacg
aaacgaaaatgtgtccctgtcgcgtcgacggtaaccgattacatgtgtgattgggattgc
tgttcattgtactattcctcctcttctcatgttctcaagcacttatccgaagatcacgta
gcagaggatctccgtcttttgtgtcgctggaatggatgttgtgatccaacaccacgtaat
cgttggtcactcatcactcatatacaagatacgcattgcaatgagacacaactgaaatta
ggtgctcaaaagagaagagatggaactgctattgctcgacctatgcaacgtccggatatt
gtgccacgtgacttgagtaatcatccaggatacgctaagaatgcagcatatgaagccatc
agaagacacgctctgaactttttgactcgtgaactcactgaggagcctgaaggaccagtg
acgaagagcatccggttgacgagttgtcttattctgagaaatcttgcaagatactcatct
gatggaagacaaaagctccgccgtcacgaatcccacatatgtgtgctggcgttgtcccga
ttagaaagctcccatgccctttgtcaattgctgtccgaattgcatcaaaccccttcggct
gaagaggaacaacagaagtcattgtcacaagctccatcgtcagcttctctgtcatcgatg
ggtggaagctcctcgcagcttcccactgttcctgactcgccgactccaacaacgacgatg
aagacaccattcagaaaaccgagtgcggtcaacaggccaatagcacctgtaaatcggatg
ttaaatttctcctcatttacggcaacccctgataaaccgtccacatcttctcccgcacca
ttcgttagcccttcacatcgccatcagacgattcagcaacaccttccaacacaaccatct
ccattagttcaaactacaccactccgcgctggcgctggaatttag
DBGET
integrated database retrieval system