KEGG   Caenorhabditis remanei (nematode): GCK72_005141
Entry
GCK72_005141      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K11765  AT-rich interactive domain-containing protein 2
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GCK72_005141
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:crq03000]
    GCK72_005141
   03021 Transcription machinery [BR:crq03021]
    GCK72_005141
   03036 Chromosome and associated proteins [BR:crq03036]
    GCK72_005141
Transcription factors [BR:crq03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    GCK72_005141
Transcription machinery [BR:crq03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     GCK72_005141
Chromosome and associated proteins [BR:crq03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    GCK72_005141
SSDB
Motif
Pfam: ARID RFX_DNA_binding TSTD2_N FOXP-CC
Other DBs
NCBI-GeneID: 9822146
NCBI-ProteinID: XP_053589246
UniProt: A0A6A5HDS4
LinkDB
Position
II:complement(7581267..7585687)
AA seq 1254 aa
MESRKRKSELELYIDKLTDPPEKQRKMAEFYNSLRMFYKRRWNAQLKLPHVQGVEVNLYR
LYDTVMALGGWQKVAAGDKWSDIAEMFGCKDDILCGDHAIKIIYMRYLSKFEQVETIGDV
DDYVDNEMSRSRGRNATSFFATNDCPISYNRNHLDQQLRDERGQIINDPDYARLTKSLIS
GLPNEIDFAMNVCMLLSHAGPKQLRISHAPTLLTLLVAHTGVYDEDDKTMLELGQDWKRS
TRHNFRSFWASSGVPLDLLMTFLDREIESEYVEDDDEFFTSVSNAFNVKDSRCWRLNQVT
TIIRNLSFESANRVTIVKTWPVMKFLIMCASCKWSPLYVAALDALSNLATDIDLADKTLV
YISQHAILRIITDGIFSMDKFKLIRSLEILTGLCGFEGNESIICDWLKPETIAHIFEIVG
VKDIMMCVYTLECLYQISEMGDAACDMLSESAKAIQQLVSMATLEAVSFGPAGLAGMKVV
EYQPNFQQPAAHPQQAQIHQVPHPQMNQQYGGGHHPNARMQPGPSHNHHPQHNHHQQMSH
QGTPAAQAPPMTVRQVIQNNLALQQVQREQMNREQHSQHHSQGGYPQSNGLRFDRRSGNI
TVRPIAPSATPGDSQLEQLTERWIKQNCVFEPAMSTARGELYAAYVDDLRNLYHSMSGSL
AMFSGVMKNLYPDVNFRMAPNGVMIVAQGIRLVRPHRLAPAGSSQTPMPTPQVDSNPLMR
KMLMSEPEPPVENGVLVNGHATESTEPVEQSKQSTKITIEQNKEEKKEKTPKVEDQQESS
VDVAAPSSDVEKKEEKAHPMTNGTIEVCQEPIKAAELFDGIENTQTEGKEVSIEIHDQFV
NESDNMKEETEKVNGMCNGHSKPKKESVASRAAHIVAVAAACNGDLEKMNGDPVCNGNKE
GEDKEETKEDSVKETDEGEEVEKEKEEEASKEVSTDLETTKRKCVPVASTVTDYMCDWDC
CSLYYSSSSHVLKHLSEDHVAEDLRLLCRWNGCCDPTPRNRWSLITHIQDTHCNETQLKL
GAQKRRDGTAIARPMQRPDIVPRDLSNHPGYAKNAAYEAIRRHALNFLTRELTEEPEGPV
TKSIRLTSCLILRNLARYSSDGRQKLRRHESHICVLALSRLESSHALCQLLSELHQTPSA
EEEQQKSLSQAPSSASLSSMGGSSSQLPTVPDSPTPTTTMKTPFRKPSAVNRPIAPVNRM
LNFSSFTATPDKPSTSSPAPFVSPSHRHQTIQQHLPTQPSPLVQTTPLRAGAGI
NT seq 3765 nt   +upstreamnt  +downstreamnt
atggagagtcgaaaacggaaatccgagctagagctctacattgacaaattgacagatccg
ccggagaaacaaagaaagatggccgaattctacaacagtctccgaatgttttataaaagg
cgatggaatgcacaactgaaacttccacatgttcaaggagtcgaagtgaatctctatcgt
ctttacgacaccgtgatggcattgggtggttggcaaaaagtggccgctggtgataaatgg
tccgatatcgcagagatgtttggttgtaaagacgatattttgtgtggtgatcatgctatc
aaaattatctatatgaggtatttatcaaaattcgaacaagttgaaactatcggcgatgtt
gatgattatgtggataatgaaatgtcgagaagtcgtgggagaaatgccacatcgttcttc
gccaccaatgactgtccgatcagttataatcgaaatcatttggatcagcaactgagagat
gaaagaggacaaattatcaatgatccggactatgccagactcacaaaatcgttgatatca
ggactaccgaatgaaattgattttgcaatgaatgtctgtatgctattatcacacgcgggt
ccgaaacaattgagaataagtcatgcaccgacacttcttaccttgctggttgcgcatacg
ggtgtctatgatgaagatgacaagacaatgttggaattaggacaagactggaaaagaagc
acacgccataacttccgaagcttctgggcgtcttctggtgttccattggatttgttaatg
acgtttttggatcgagaaatcgaatcagaatacgttgaagacgacgatgaattcttcact
tccgtctccaacgcatttaatgtaaaagattcgagatgttggcgtctcaatcaagtcaca
acgataattcgaaacctgtcatttgagtctgccaatcgagtcactattgttaagacatgg
ccggttatgaaattcctgattatgtgcgcatcttgcaaatggtctccgctttatgttgct
gctcttgatgctcttagtaacttggcaactgatatcgatctcgccgacaaaacactggta
tacatttctcaacacgcaatacttcgcataatcactgatggaatattcagtatggacaag
ttcaaacttatacgatctttggaaattttgactggcctttgcggtttcgaaggcaacgaa
tcaatcatttgtgactggttgaagcccgaaacgatagctcatatatttgaaattgtcgga
gtgaaagacattatgatgtgtgtctacactctcgaatgcctctaccaaatctcggaaatg
ggtgacgccgcttgtgatatgttgtccgagtcggcgaaagcaattcaacaattggtctct
atggcaacactggaagctgtctcattcggtcctgccggtctagctggaatgaaagttgtc
gagtatcaaccgaatttccaacaacccgctgcccatccccagcaagcacaaattcatcaa
gtgccacaccctcaaatgaatcaacaatatggaggaggacatcatccgaatgctcgtatg
cagccaggcccaagtcacaatcaccatccacagcataatcatcatcaacaaatgagtcat
caaggaactcctgcagcacaagcacctccgatgactgttcggcaagttatacagaataat
cttgcacttcaacaagtacaaagagagcaaatgaatcgagaacaacatagtcaacatcat
tctcaaggtggatatccccaatcgaatggattgaggttcgatcgtcgcagtggaaatatt
accgtccgtccgattgctccatctgctaccccgggagacagtcaacttgaacagctgaca
gagaggtggataaaacaaaactgtgtgtttgagccagcgatgtcgactgcacgtggagag
ctgtatgctgcttacgtggatgatctcagaaatctgtatcattcgatgagtggaagtctc
gcgatgttcagtggagttatgaagaacttgtatccggatgtgaattttcgaatggctcca
aacggggttatgattgtcgctcaaggaattcgcctagttcggccgcaccgtctcgctcca
gcaggttcttctcaaacaccgatgcccacaccacaagtagattcgaatcctttgatgaga
aaaatgttgatgtcagagcctgaaccacctgtcgaaaatggtgtgttagttaatggacac
gcaacggaatctactgaaccagttgagcagtctaagcagtctacgaagattaccattgaa
caaaacaaagaagagaaaaaggagaagacaccgaaagtagaggatcagcaagaatcgtcg
gtagatgtagctgctccatcttctgatgtagagaagaaagaagaaaaggcacatccgatg
acgaacggaacaattgaagtgtgtcaggaaccgatcaaagcggcagaactgttcgacgga
atcgaaaatactcaaacggaaggaaaggaagtgtcgattgagattcacgatcagtttgtg
aacgaatcggacaacatgaaagaagaaactgaaaaagtgaacggaatgtgcaacggacac
tcgaaaccaaagaaggagtctgtggcaagtcgtgctgctcatattgttgcggtagcggct
gcgtgtaatggtgatttggagaagatgaatggagatccagtatgtaatgggaataaagaa
ggagaagataaagaagagacgaaggaagattcagtgaaagaaacagatgaaggagaggaa
gttgaaaaggaaaaagaagaggaggcttcaaaagaagtatccactgatcttgaaactacg
aaacgaaaatgtgtccctgtcgcgtcgacggtaaccgattacatgtgtgattgggattgc
tgttcattgtactattcctcctcttctcatgttctcaagcacttatccgaagatcacgta
gcagaggatctccgtcttttgtgtcgctggaatggatgttgtgatccaacaccacgtaat
cgttggtcactcatcactcatatacaagatacgcattgcaatgagacacaactgaaatta
ggtgctcaaaagagaagagatggaactgctattgctcgacctatgcaacgtccggatatt
gtgccacgtgacttgagtaatcatccaggatacgctaagaatgcagcatatgaagccatc
agaagacacgctctgaactttttgactcgtgaactcactgaggagcctgaaggaccagtg
acgaagagcatccggttgacgagttgtcttattctgagaaatcttgcaagatactcatct
gatggaagacaaaagctccgccgtcacgaatcccacatatgtgtgctggcgttgtcccga
ttagaaagctcccatgccctttgtcaattgctgtccgaattgcatcaaaccccttcggct
gaagaggaacaacagaagtcattgtcacaagctccatcgtcagcttctctgtcatcgatg
ggtggaagctcctcgcagcttcccactgttcctgactcgccgactccaacaacgacgatg
aagacaccattcagaaaaccgagtgcggtcaacaggccaatagcacctgtaaatcggatg
ttaaatttctcctcatttacggcaacccctgataaaccgtccacatcttctcccgcacca
ttcgttagcccttcacatcgccatcagacgattcagcaacaccttccaacacaaccatct
ccattagttcaaactacaccactccgcgctggcgctggaatttag

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