Caenorhabditis remanei (nematode): GCK72_005203
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Entry
GCK72_005203 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K13103
tuftelin-interacting protein 11
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crq03041
]
GCK72_005203
Spliceosome [BR:
crq03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
GCK72_005203
Other components
Complex C specific factors
GCK72_005203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
Motif
Other DBs
NCBI-GeneID:
9821598
NCBI-ProteinID:
XP_053589276
UniProt:
A0A6A5HEC6
LinkDB
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Position
II:complement(7856970..7859688)
Genome browser
AA seq
824 aa
AA seq
DB search
MDDDDGRETFEISDMDMEYAMNPGGRRRFQNKDQATYGVFALDHDSDDDEQSTSRGPVNK
RQKYTAPMSFVSGGVQTSSKIDKTDPASLNMGTYSSKPKNDDEDEVIELNFDRRNKRTAK
EQGAQVFAGMRSSNTKGTTDAQFGGWMKHGKSDVIMKMMQSMGYKAGEGLGAKGQGIVEP
VTAALRKGRGAVGAYGKEATGPKFGESAAEAQKRLAQGGATRTEGDEQEKTGIKIKGGWK
KSQKVKTTYRTIEDVLEDGMSASRPSSNQQSQQYSNIKVIDMTGKQQKVYSGYDSFSMKT
RSEYDTVDEEERTVFDVPELLHNLNLLVDLTEEGIRRSNQQLIAVKDQTTALEYDLVQIE
NSLTTEEEQAKHMKDVFELIDGFSSNRSPTMSECQALFRRLRSEFPHEYELYSLETVAIP
IVLPLIQRHFADWKPLQDKSYGCDLISEWRDILDDSKNGRKTTFGHNKTKGDDIRAFDRI
VWDGILPSIRRACLQWDPRTEMHEMIEVVEEWIPLLSSWITENILEQLIIPKISEAVNQW
DPMTDEVPIHQWVVPWLVLLGDRIQTVMPPIRQKLSKALKLWNPMDRSAMATLRPWQNVW
SVGTFSSFVAQNIVPKLGAALDTMQLNPGINPEYPEWTACMEWLEMVHPDAIANIVTKYF
FPRFYAVLCQWLDSPGVDYNEVRRWYASWKDRIPQALLNYPTVTENLRRSMIAVGTSMKG
EKVSGLVAAPIAPMAPAPSAPMPQFAPVTQQLSLKEIIEITAGKHGFTYHPQKDRYKDGR
QVFWFGALSIFMDSEMVYVMDPVEFIWRPSGLGELIQMAQGAQG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatgacggccgcgaaacgtttgaaatcagcgatatggatatggagtatgcg
atgaatccgggtggcagacgacggtttcagaataaggatcaggcgacttatggtgtattt
gctctggaccatgacagcgacgatgatgaacaaagcacaagccgtggacccgtgaacaag
cgtcaaaaatacacagctccaatgagttttgtcagtggaggtgttcagaccagctcaaaa
attgataagactgatccagcatctttgaatatgggaacatactcttcgaaacccaagaac
gacgacgaagatgaagttatcgagttgaatttcgacaggcgaaacaaaagaacagcaaaa
gagcagggagctcaagtgttcgcaggaatgcgctcttcgaatacaaaagggacaacagat
gctcaatttggaggttggatgaaacacggaaagtctgatgtcattatgaagatgatgcag
tcgatgggttacaaagctggagaaggactcggagcgaaaggacaaggtattgttgaacca
gtgacagcggcgctgagaaaaggaagaggagctgttggagcttatggaaaggaagcaact
ggtccgaagttcggagaatctgccgctgaagcacagaaaagattagcgcagggtggagcc
acgcgcacagaaggagatgaacaggagaagacaggaatcaagataaaaggaggatggaaa
aagtcacaaaaagtcaaaacaacttatcgaactatcgaggatgttttggaagatggaatg
tcagcatctcgaccaagctctaaccagcaatctcaacaatattcaaatatcaaagttatc
gacatgactggaaaacaacagaaagtctattcgggttatgattcgttttctatgaaaaca
cgatctgaatatgatactgttgatgaggaagagagaactgtctttgatgttcctgaattg
ttacataatctgaacttgcttgttgatttaacagaagaaggaatcagaaggagtaaccaa
cagttaatagctgtaaaagatcaaacgacagcgcttgagtacgatttggtgcaaattgag
aattcattaactacagaagaggaacaagcaaaacatatgaaagatgtcttcgaactgatt
gatggtttttcttcaaaccgatcaccaactatgtcagaatgccaagcactgttccgacgt
cttcgatcagaatttccgcatgaatatgagttgtattcactggagactgtggctattcca
attgttcttccactcattcaacgtcactttgctgattggaagcctctccaagataagagc
tatggatgtgatttaatttcggagtggagagatattctggatgatagcaagaatggaaga
aagacgacatttggacataataaaacgaaaggagacgatattagagccttcgaccgaatt
gtctgggacggtattctaccatcaattcgtcgtgcttgtcttcaatgggatccacgcaca
gaaatgcatgaaatgatcgaagtggtagaggaatggattccacttctctcatcttggatc
acagaaaacatcttggaacaactaataattcctaaaatttccgaagctgtaaatcaatgg
gatcctatgacagatgaagtacctatccatcaatgggttgttccgtggcttgtacttctt
ggagatcgaattcaaactgttatgcccccgattcgacagaaattgtccaaagctctcaaa
ttatggaatccaatggacaggagtgcgatggcaacgctccgtccgtggcaaaatgtctgg
tctgttggcacattttcatcgtttgtcgctcagaacattgtgccgaaactcggagctgct
ttggatacgatgcaattgaatccaggtataaatccagaatatccagagtggacggcatgc
atggaatggctagaaatggtacatccggatgcgattgcgaacattgtcacgaagtatttc
ttcccaagattctacgcagttctctgtcaatggctagatagccctggtgttgattacaac
gaagtgaggcgatggtacgcatcatggaaagatcggattccacaagctcttctcaattat
ccgactgtgacagagaatcttcgtcggtcaatgattgcagtcggaacatcaatgaaagga
gaaaaagtcagtggactcgtcgcagccccgattgctccgatggctccagctccatcagca
ccaatgcctcaatttgcaccggtcactcaacaactttcactcaaagaaatcatcgagatc
actgctggaaagcacggattcacttatcatccacagaaagatcgatacaaagatggaaga
caagtgttctggtttggtgcactatcgatatttatggactctgaaatggtgtatgtcatg
gacccggtggaattcatttggagaccttcaggactcggtgaactcatccaaatggctcaa
ggagctcaaggatag
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