Caenorhabditis remanei (nematode): GCK72_005219
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Entry
GCK72_005219 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04136
Autophagy - other
crq04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
GCK72_005219
04136 Autophagy - other
GCK72_005219
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
crq01001
]
GCK72_005219
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_005219
Enzymes [BR:
crq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
GCK72_005219
Protein kinases [BR:
crq01001
]
Serine/threonine kinases: Other
VPS15 family
GCK72_005219
Membrane trafficking [BR:
crq04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
GCK72_005219
Autophagy
Autophagosome formation proteins
PI3K complex
GCK72_005219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Cnd1
HEAT
Beta-prop_Vps41
PK_Tyr_Ser-Thr
EIF3I
INTS1_R4
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
9822416
NCBI-ProteinID:
XP_053589283
UniProt:
A0A6A5HDQ9
LinkDB
All DBs
Position
II:complement(7942517..7946743)
Genome browser
AA seq
1242 aa
AA seq
DB search
MYKWSRNFKFLIYRYTFLLFKALSQCETAGVCHGDLKSQNVLISSTDWLQITDFAPFKPC
FLTHDNPSSFTFFFDTSRRQSCYIAPERFISATEYDEKLKDGQEEWLFGSLTPKMDMFSA
GCIVFELLCDRPPFTYSSLCEYRSMNDNDAANMLLRLVQDVPVPYRALLRLLLNRDPSFR
ISANAVLTGAALKFPHILESFLFRYLDRFRPLYGASTSTDPSTDDFSQALEFSYLEPDDI
ISKLKREKQLWWARLSESEESKSFAFLFVSLITANLRALRTIQAKTDAIRMLVELSTISD
SRVAIDRILPYFVHLWSDPETQVRATAVTAAAELLNPIQPKTYEESLVFVDYLFPMLNSM
SNDSVDCPQHVLFAIATSLGQFADTAYRFYTVGREIRQATPYDDEVSTTGDPQQNDDAGA
LLHGVSAMFSALCSKDPMVKRCLVESKSLILLYHFFIKIGNDDTLLRFLCTFLNAKTEWR
LRAAFFDSLPVCVQKRSEGMVPLLQLGLQDCEEHVVTRALGCIHILIKNENLDRLSVKKL
LDDVLPFLVHPNDWIRSAVCDILLAINSQWHKAEVHVKLIPLVSPYIEESKRRILTLRSK
AVLMSQLTGPIPRVTFNQILELSLENTKQLTTLLEIHFQSGKPFEAQASWFNTIFPKIKT
ENKTGVVEHNDLKAALETRKRLTMSVHSFRKLFERMAETRNTAGMETFLTRQLGTIDLSS
TAHSRVRRKEFTYGGDDSAMTGNSKPTTHINIPNHSTERRDTLLLGGEVVFEEERTVTNA
PTPYSSVKSSTFDNQVNEMLAHLNELHMKNVNSRPKRPLAPSASHPILSASASGGSLGGS
SGHVKGTIITHLHEHSGKITKLSANRDGDFFLSGSGDGTVKVWKTRAVLGEGYGAARSED
TWIPSDLNREHVYAVGWNDQYACSATHDGYVRWADVGQGPARVVTQVKIPESEGAPVYLH
CNGPMTVVRTHHGVLYGIDLRVGSSEGPLKRHDIWRKKFQETHGLVTSSAIDPWQQSWMV
IGNNSNRKNLMLYDLRFREEVLRWESPHLNVQPLVVWANPVSRQECPEVFVGFSMHGEVS
SYELGAQPLRKRVFWTGGTPILSYNDTSNDPRKQETLVTRALCVCEKTGVVYTGDTRGAI
RKWNPSRALGCEILSSPPKGRSAYRTIFEENDISNTPSGTSTDPLVIYERNVLDTEAKEN
QKIVPLDSKPSTYHRTPITDMMLLNSELLVSSGYDGVIKIWK
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaatggtcacgtaatttcaaattcctcatttacaggtacaccttcctgttgttc
aaggcgctctctcaatgtgaaacggccggagtttgtcatggggatttaaaatctcaaaat
gtgttgatctcttccacggattggcttcaaatcaccgattttgcaccattcaaaccatgt
ttcctcactcatgacaatccatcttcattcacatttttctttgacacaagtcgtcgacaa
agctgttatattgcacccgaacgattcatatctgcaacagaatacgacgaaaaactaaaa
gatggacaggaagagtggctttttggatcattgactccaaaaatggatatgttctcagct
gggtgtatcgtgtttgagcttctctgtgatcgacctccgttcacttatagctcactttgt
gaatatcgatcaatgaatgataatgatgcagctaatatgttattaagattagttcaagac
gtcccagtgccatatcgggctcttctccgtcttttgctcaaccgtgatccatcattcaga
atatcagcgaatgctgtgcttacaggagccgcgttgaagttcccccacattcttgaatca
tttcttttccgatatctcgatcgattccgtccactttacggcgcctcaacctctactgat
ccatcaacagacgatttcagtcaagcactcgaattttcgtatttggaaccggatgatatc
attagcaagttaaaacgagaaaaacaattgtggtgggctagattatcggaaagtgaagag
tcgaagtcgttcgcatttctctttgtctcactgattactgcaaatttgagagctttgaga
acaatccaggcaaaaacagatgcgattcggatgcttgtcgagctttcaactatatcagat
tcaagagtagccattgatcgtattcttccatattttgtgcatctttggtcagatccagag
acccaggttcgagcaaccgcagtgactgccgccgcggaacttctcaatccaattcaaccg
aaaacttatgaagaatctctcgtttttgttgattacctcttccctatgctgaactcaatg
tcaaatgattcagtagattgtcctcaacacgttttgttcgcaatcgccacttctctcggt
caattcgctgatactgcctaccgattctatactgtcggccgtgaaattcgacaggctacg
ccgtatgacgatgaggtctcaacaacaggagatccacaacaaaacgatgatgctggtgct
cttcttcatggtgtctctgcaatgttttcagcattgtgtagtaaagatccgatggtgaaa
aggtgtttagtggagagcaagtcgctcattcttctctaccatttcttcattaaaatagga
aacgacgatacacttctccggtttctttgcacgtttttgaatgctaaaactgaatggagg
ttacgagcagctttcttcgattctcttcctgtttgtgttcaaaagagaagcgaaggaatg
gtccctcttctgcaattaggtcttcaagactgtgaagagcatgttgtcacacgagcactc
ggatgcattcatattcttatcaaaaatgagaacttggatcggttatctgtaaaaaagttg
ctcgatgatgttctcccatttttagtgcatccgaatgattggatacgatcagccgtttgt
gatatacttctcgctatcaattctcaatggcataaggctgaagttcatgtgaaacttatt
ccattagtgagcccatacattgaggaatcgaagcgaagaatactgacgctgagaagcaaa
gcagtacttatgagccaacttaccggtccaattccacgtgtcacattcaatcagattcta
gaattaagtttggaaaatacgaagcagttaactacacttttagaaatacatttccaatcg
ggaaaaccatttgaagcacaagcttcatggtttaacaccattttcccgaaaattaaaaca
gaaaacaagacgggagttgtggagcataatgacttgaaggcggctttggaaacacgaaaa
cgactgacaatgtctgttcattcattcagaaaacttttcgaacgaatggcggagacaagg
aatacagccggaatggaaaccttcttgactcgtcaactgggaacaatcgatctctcctca
actgctcacagccgagttcgtcggaaagagttcacttacggtggcgatgattctgcgatg
actggaaattcgaaaccaactactcatattaatattccgaatcattccacagagagacgt
gatacattgttacttggaggtgaagtcgtttttgaagaagagcggacggtgacaaatgcg
cctacgccttattcttcagtaaaaagctccactttcgacaatcaagtgaacgaaatgctc
gcacatctcaacgaattacacatgaagaatgtgaatagtcgacctaaaagaccattggca
ccaagtgcaagtcatccgattctgagtgcatcagcttctggaggttctctgggcggatca
tccggacatgtaaaaggaacaattatcacacatcttcacgagcattctggcaagattaca
aaactttctgcgaatcgcgacggagatttcttcctcagtggatcaggcgatgggactgta
aaagtttggaaaacacgcgcagttcttggagaaggatatggtgctgctagaagtgaagac
acatggattccatctgatttaaatcgagaacacgtttatgctgttggatggaacgatcag
tatgcgtgctccgcgacacatgacggatatgttcgatgggctgatgtcggacaaggacct
gctcgtgttgtgacacaagttaagattcctgaatcagaaggagcacccgtatatctgcat
tgcaatggaccaatgacagttgttagaacacatcacggagtactgtatggaattgatttg
cgagtcggatcgtctgaaggaccactgaaacggcatgatatctggagaaagaagttccag
gagacacatggtcttgtcacttcttcagctattgatccatggcaacagagctggatggtt
attggaaataattcgaataggaagaatcttatgctctatgatctccgattccgtgaagaa
gttctccgctgggaatcacctcatctcaacgttcaaccacttgtagtatgggcgaatcca
gtgtctcgacaagaatgtccggaagtattcgttggtttctcaatgcatggtgaagtgagc
tcatacgagttgggagcacagccactccgaaaacgtgtcttctggactggaggaacaccg
attttgagttacaatgatacatcgaacgatccaagaaaacaggaaacactcgtcactcgt
gctctttgcgtttgtgagaaaactggtgttgtctatactggagacacacgtggagctatt
cgaaaatggaatccatcgagagctctcggttgtgaaattctctcttcgccgcctaaagga
agatcagcgtatcgaacgattttcgaggaaaatgatatttcgaatacaccttctggaaca
tcgactgatccattagtgatttatgagagaaacgttttagacacggaagcgaaggaaaat
cagaaaattgtgcctttggattctaagccatccacatatcatcgaacacctatcactgac
atgatgctactcaactcggaacttctagtctcttctggctacgacggtgttatcaaaatc
tggaaataa
DBGET
integrated database retrieval system
