Caenorhabditis remanei (nematode): GCK72_005277 Help Entry GCK72_005277      CDS       T09085                                  Name (RefSeq) hypothetical protein   KO K15192   TATA-binding protein-associated factor [EC:5.6.2.-] Organism crq  Caenorhabditis remanei (nematode) Brite KEGG Orthology (KO) [BR:crq00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:crq03021]     GCK72_005277 Transcription machinery [BR:crq03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Others      GCK72_005277 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom Helicase_C DUF3535 HEAT Adaptin_N HEAT_2 CEP104-like_TOG Motif Other DBs NCBI-GeneID:  9803086 NCBI-ProteinID:  XP_053589308 UniProt:  A0A6A5HDE0 LinkDB All DBs Position II:8165904..8171532 Genome browser AA seq 1654 aa AA seqDB search MSADTSARLLQLDPLLEAKNPNVRNEAAAAYGKLSILSEDVKESLKKHASSQAWDTRVSA GKALQALLQNVPDFERKKENENSSVSERIKNIVVLNVQRNFKPLLSDDEKSLKAGKERGN QKTQREIVDQHLEYNRVTGISSQKFLSDDEFLHEGVSEPELPSTSKELLQVTKTEIIEGE IDENFNDDSERLKTFWKVLKEFVNMVAEQQWYTRHGASIAICQIATTSYDRLSYELIDTI LYLLIHVLILDKFNDFISGRNATAPVREQCAQALVHMLRNTDEKRREVVLEIVVQMVSTP GDDNWNIRQSGLLILKYYFAIARNDDDDHKKTFDRCFDLVIQSLDDPIDDVTGCAVKTLA SILSNKEIPQEEMSKLVEKVMNHVWKLLDIEAAKEQLRAGLDALCIDLLEIVELWLRWNQ ELGISRQSLLTICSTIDAAFPVRCEKIVQLLDADIDRPQHGKLTAEDVFIIIKQLYRILL FAPPSDSLVFLEKTFITFSKVFRTYQHILIEKGDVSQKVGNWLGCLLLDHRNPQIDVFAC DVDGISSNNKTSTELMCSEEMRFLGEKEKDKVYLTRKILCAKFLAIILEALYESDEEIQG QKVDIAVQLLFIPFFQSRTIMHNLGVSIVVNEWAALYRAAVNAKITEKPPPMTIIQLADS IVRGPGKQYDEMTTIVHGLTKDCNEFIEYCVVRGFDRTSTEATGGAPEDVSKAAYSTVRP NLKTDKQREAIDTRYNTLCRSIENAKMNIKSNGIRINALLSSTLFYFGNAPEKLTPQIRP IVETMQTEENDAMASEVFRGAVPLLVMFSWPRNPRPYVKVLAKALDSFSGCSIRMPKVGV TSPGSQTTIISMRRIWGKETEDGFEENNGMVSAESRNAELFLTILCQFNATQLAEFYSHF DLSEDVDLNTFLTRLELHNSLWSRVGSRLSEQSTDKIFNLLPSDDPAIRYAFAKAIETFC KSSCGDTLSKCYTRLVILSQDLNNVNSRLATVEVFLRLCMMDTCYLNGWATLLAPPVFQL LTDQCEAVRDAAGEAFRRLIPVVTLENPNFVIEGISEELTKKRAEYSNFINVLGAPSSLP RVIREDITGGFDTSMLREYQLEGITWIRFLRTYGLHGILADDMGLGKTLQTMCSIALSVD KDDLDERNKCSLIVCPRTLVDHWCLEWNRFFPKRIPAVKNIIRAQRAEICVIPYDDLKSA YISDRVWNYIVLDEGHVMRNSKRRAWKFAIELVCKSRLILSGTPVQNSPADLWSLFAWLM PGYLGTEKQFRSQFLKKIMKCRLPKANELDLKAGSAAISQLHKLVLPFIMRRLKTEVLKE LPEKNVQDYECELTDDQKDVYRFIVDRCTSSYEELKNKTGISSLVTLISLRKLTDHTMLV YDTLLKIGAPQDILAKARTARSGKMEALKQLLIECEICKNPDDEVLPEADELGGLNEAGP GHRALIFCQWKTSAKLVSNALSSGEFGSVVSHLVLDGDVPAGDRMKMVNRFNEDKTIDVL ILTTHVGGVGLNLTGADTVIFLDHDWNPMKDLQAIDRAHRLGQTRNVNVYRLITQGTVEE KVMSLAKFKLNTAQALIGADNTSMMTMETGELMNMFTLDGDEPLKKGTGSSEPAAKKSKK ASTSGGASEEINLASMWDESQYDDFQVDNFLRNA NT seq 4965 nt NT seq  +upstreamnt  +downstreamnt atgagcgccgacacttcggcacgtcttctacagctcgatccattacttgaagcaaaaaat ccaaatgttagaaatgaagcggcggcagcgtacggtaaattatcgattttgagtgaagat gtgaaagagagcctgaaaaaacacgcgagttctcaagcctgggacactcgagtttctgcc ggaaaagctttgcaagcccttcttcaaaatgttccagattttgaaagaaaaaaggagaat gaaaactcgtcagtttcagaacgaattaaaaacatcgtcgtactgaatgtgcaaagaaac tttaaacctcttttgagtgatgatgaaaaatcattgaaagctggcaaagaacgagggaat caaaagacacaaagagaaattgttgatcagcatctcgaatacaatcgtgtcactggaatc agctcgcaaaagtttctgagcgatgatgagtttcttcacgagggagtttcagagccagag ttaccttcgacaagcaaagagttgttgcaagttacaaaaacagagataatagaaggagaa attgatgaaaatttcaatgatgatagtgaaagactcaaaactttctggaaagtactgaaa gagtttgtaaatatggtcgctgaacaacaatggtatacaaggcacggggcatcgattgca atttgtcaaatagctacaacttcatatgacagactatcttatgaactgattgatacaatt ctgtacctattaattcatgtactcattctcgacaagttcaatgatttcatctccggccga aacgcaactgcaccagtcagagaacaatgtgctcaagctttggttcatatgcttcgaaat acagatgaaaaacgacgagaagtagtgttggaaatcgtagttcagatggtcagcactccg ggagatgataactggaacattcgtcaatccggacttcttattctcaagtattattttgca attgcacgcaatgacgatgatgatcacaagaagacattcgatcgatgcttcgatcttgtc attcaatcactcgatgatccaattgatgatgtgaccggatgtgcagtgaaaacactagca tcaatactgtcgaacaaagaaattccacaagaagaaatgagtaaactcgtagaaaaagtt atgaatcatgtatggaagttactggatatagaagcagcaaaagagcaactgcgagctggt ctcgacgctctttgtatagatctattagaaatagtggagttatggttacgatggaatcaa gagcttggaatcagtcgacagagtttattgacaatatgctcaactattgatgcagcattt ccagttcgatgcgagaaaattgtgcagctgcttgatgcagatattgatagacctcagcat ggaaaactgactgctgaagatgtttttattatcattaaacaactatatcggattcttctt tttgcaccgccatcggattctctcgtgttcttagaaaaaacattcataacattcagcaag gtgtttcgaacgtatcagcatattcttatagaaaaaggtgatgtaagtcagaaagttgga aactggcttggatgtcttcttctcgatcaccgtaatcctcaaatcgatgtattcgcatgc gatgtcgatggaatttccagtaacaataaaacatcgacagagctgatgtgttcagaagaa atgagatttcttggagaaaaggaaaaagacaaagtatatctgacacggaagatactatgt gctaagtttttagccatcattctggaggctttatatgaatctgacgaagaaattcagggg caaaaagtagacattgctgttcaattactcttcattccattctttcaatcgcgaaccata atgcacaatctaggagtttcgattgttgtcaacgagtgggccgctctatatagagcagca gttaatgcaaaaatcacagagaaaccgccaccaatgacaatcatacaactagcagattca attgtgagaggtcctgggaagcagtacgatgagatgacaactattgtacatggattgaca aaagattgcaatgaattcatcgaatattgtgttgtacgaggatttgatcgaacgagtacg gaagccactggaggagcgcctgaagacgtgagcaaggcagcgtattcgacagtccgacca aatctgaaaacagataaacaacgagaagcaattgatacaagatacaacacgttgtgtaga tctatcgaaaatgcaaaaatgaatattaaatctaatggaatccgtattaatgcacttttg tcttctactctcttctattttggaaatgctcctgaaaagttgactccacaaatccgtcca atcgtagaaacgatgcaaactgaagagaatgacgcaatggcttcagaagtgtttcgtggc gccgttccccttcttgttatgttcagttggccaagaaatcctcgtccatacgttaaagtt ttggcgaaagctctcgattcattctcaggatgttctattcgaatgccaaaagttggagtt acaagtcccggtagtcaaacaacgataatcagtatgagacggatatggggaaaagaaaca gaagacggatttgaggagaataacggaatggtctcggcggagagtaggaatgctgagcta ttcttaacgattctctgtcaattcaatgccacgcaactcgccgaattctattctcatttt gacttgagtgaagacgtcgacctgaatactttcctaacccgtttggagcttcacaatagt ctttggagtcgtgttggatctcggctttcggaacaatcaactgataaaatcttcaattta cttccatccgatgatcctgctattcgatatgcgtttgcgaaagccattgagacgttctgc aagtcttcgtgtggagatactctatcaaaatgttatacgagacttgtcattctttcccaa gatctgaataatgtaaactcgagattagccactgttgaagttttccttcgactttgtatg atggatacatgttatttgaatggatgggcaactctattggctcctcctgtgtttcaactt ctcacagatcagtgcgaagcagttcgtgacgccgctggagaagcgttccgtcgattaatt cccgtcgtgactcttgaaaatccgaactttgtgatcgaagggatcagcgaagaactcact aaaaaacgagcggaatactccaattttatcaatgttctcggtgcaccgagtagccttcca cgtgtcattcgagaagatattactggaggattcgatacgagtatgcttcgagaatatcaa ctagaaggaataacatggattcgatttttgcgaacctatggacttcatggaattcttgca gacgatatgggtctcggaaagacacttcagacaatgtgctccatcgctttatccgtagac aaagatgatctagacgaacgaaataaatgttcactcattgtctgccctcgcactctcgta gatcattggtgtctagaatggaatcgattcttccccaaacgaattccagcagtaaagaat attataagagctcaacgtgcagaaatttgtgtcatcccttatgacgacctaaaatctgca tacatttcagatcgtgtctggaattacattgttcttgatgaaggacacgtcatgcgaaac tcaaaacgacgtgcctggaagtttgcaattgaactggtctgcaaaagtcgacttatcttg tctggtactccagtgcaaaactcgcctgctgatctctggtctttgttcgcatggctcatg ccgggatatctgggaaccgagaaacaattccgtagtcaattcctcaaaaagatcatgaaa tgtcgactaccgaaagcaaacgagctcgatctcaaggcaggttccgctgccatttcacaa cttcataaacttgttcttcccttcatcatgcgtcgtttgaaaactgaagtgctcaaagaa ctcccagagaagaatgttcaagattacgaatgtgagctcactgacgatcagaaggatgtt tatcgattcattgtcgatagatgtacatcatcatatgaagaactcaaaaacaagactggc atttcgagtcttgtaactttgatttctctccggaagcttacggatcacacaatgcttgtt tatgatactttattgaaaatcggagcaccacaagacattctcgctaaagcaaggaccgcg aggtcaggaaaaatggaggcactgaagcagttgttgattgaatgtgaaatttgtaagaat cctgatgatgaagtgttaccagaagctgacgaattaggcggattaaatgaagctggaccc ggtcacagagctctcattttctgtcagtggaagacctcggctaaacttgtttcgaatgct ttgagtagtggagaattcggaagtgtcgtatcacatttagtgctagatggagacgttccc gctggagatcgaatgaaaatggtcaatcgattcaatgaggacaaaactatcgacgttttg attctaacaacacatgtcggtggtgttggtctgaatctcacaggtgccgatacagtaatc ttcctggatcacgactggaatccaatgaaggatttgcaagccatcgatcgtgctcatcgt ctcggacagactcgaaatgtcaatgtataccgactgattacacaaggaactgttgaagag aaagtgatgagtttggccaagttcaaacttaatacagcacaggctctcattggcgccgac aatacatcaatgatgacgatggagactggagaactgatgaatatgttcacgttagatggc gatgagccgctgaaaaagggaacaggatcatcagagccagctgcgaaaaagagcaaaaaa gcctcaacatctggtggtgcttcagaagaaatcaatttagcaagtatgtgggacgagagt caatacgacgacttccaagtcgataatttccttcgaaacgcataa

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