Caenorhabditis remanei (nematode): GCK72_005308
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Entry
GCK72_005308 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K13144
integrator complex subunit 7
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crq03041
]
GCK72_005308
Spliceosome [BR:
crq03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
GCK72_005308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS7_N
INTS7_C
Motif
Other DBs
NCBI-GeneID:
9822557
NCBI-ProteinID:
XP_003117348
UniProt:
E3LF55
A0A6A5HF65
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All DBs
Position
II:complement(8314341..8317558)
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AA seq
913 aa
AA seq
DB search
MLSGTAEAQLVLDKGLRGTPTEQLATISQLSRLIEDHPVPTFVNAMLLRVADAFKDGSLP
LRVAIARALSQCGSHLTLAFSVPEIFRRFLTVSHSNDPNARETVLDVLAELSPLLPESNQ
CHHLIRESLSTDNEGEYRATCRALKAFASLSHSFAESIVLQIGKILEEDEVSESRKVMLC
SSFSTMSATAQVVEQVFEIANIILRRTISDEYFNAFLSSTTSLCIEIRYAISKQIALLLD
LLNPSERDGPLPSKARRSIILKELRRLANFSNIWTEEQVNIFVGSLQPGMNDRSLMDFFE
ATTSLSKNCPQSNLSSLKGLVMSNTGYGSHVNPEVSIRFVYFASQVFCSPRAFENETPEF
IESTMTAFTVVVVSTCTCGKLKRRLASKLYRAVGDLLLTYPHTQYPFALMIISAVFSAFD
SPITNDNNQKERLELMCRLVDSEKLYILEIQKWACSVRNEKKRLFDAYPSEFSYLCVAVG
TSIPPDFPSVFYNDCSVLKYDTARSAFRNGHWKKVAAPNLESIDLTIMPQFERNWITALR
NIAESQLTELGLDELEKQQSHLISALAALKSEKTHLRFGGDLRFPIGMVSAMLSSSYAYF
HMASVMQPFLTCLSGALKPDAFFNPVMSKRFLVALTSCESSLNDALAEWSSLCRASFCAD
PTSFDLITLFYLRISILLVAVKVLLKKQSPDTIIQIPALRNARTCSLLQRERLEWAINKI
RTLQSISTPNINIIKTLYTITEQLATTPYMLPRFFFQQFYFVDFKLSTTPQAERNETVTV
MSGDTVPVRVDGAITSTHPSPIRSIIVFAEVVCPTSHTKSQILKEVVDPTDNKYFTAQFL
LTFKTTCEVKFRIEFIDQISRKQWNADGGLTLPIMVREKPQPTVPEMRRGPVSIPTDPRQ
MVRNSMFPLPDHI
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctgggaccgccgaggcgcaattggtccttgataaaggtctccgaggtactccc
acagagcaactagcaacgatctcacagctcagtcggttaattgaagatcatccagtgcca
acatttgtcaatgcaatgcttcttcgagttgccgatgcattcaaggatggaagtctacct
ttgcgtgttgccattgcccgtgctctcagccaatgtggatcacatttaacacttgcattt
tctgttcccgaaatattccgaagatttctcacagtcagtcattcgaatgatccgaacgct
cgcgagacagttctagatgttctcgctgaactatcaccacttcttccggaatccaatcaa
tgccatcatttgattcgggaatcactttcaaccgacaatgaaggtgaatatcgagcgacg
tgccgtgcactcaaagcattcgcatcattatcacattcatttgccgaatcgattgtacta
caaattggaaagattctcgaagaagatgaagtttcagaatcaagaaaagttatgttgtgc
tcctcgttttccacaatgagcgcaacggctcaagtagttgaacaagtgtttgaaatcgca
aatattattcttcgtagaacgataagtgatgaatatttcaatgcattcttgagctccaca
acaagtttgtgcatcgaaattagatacgctatttctaagcagatagcactgttgttagac
cttctgaatccatcagaacgagacggccctcttccgtcaaaagctcggcgttcgattatt
ttgaaggaactgaggcgattagccaatttttcaaatatttggacagaagaacaagttaat
atatttgttggatcattgcaacctggaatgaatgatcgctctcttatggatttcttcgaa
gcaaccacatcgctttccaagaattgtccacaatcaaatctgtcttcattaaaaggtctc
gtaatgtcaaatactggatacggatcacatgttaatccagaagtcagcatacgatttgtg
tatttcgcatctcaagttttctgttccccacgagcgtttgaaaatgagactcctgagttc
atcgaatcaacgatgactgcattcacagttgttgtggtgagcacgtgcacttgtggtaaa
ctaaaaagacgattagcttcaaagttgtaccgtgcagttggtgaccttttgctcacgtac
cctcatacacagtacccctttgcattgatgataatttctgccgtcttctctgcttttgat
tctccaattaccaacgataacaatcaaaaagaacgtctggagttgatgtgtcgactggtt
gattctgagaagttatatatcctagagattcaaaaatgggcgtgttcagtgagaaacgag
aagaaaagactatttgatgcatatcctagtgaattctcatatctatgcgtcgctgttggt
acttcaattcctccagattttccatctgttttctacaatgattgctcagtgttaaagtac
gacacagcacggagtgcgttcagaaatggacactggaagaaggtggcagctccgaacttg
gaaagtattgatctgacgataatgccacaattcgagaggaactggatcactgctctccga
aacatagccgaatcacagctgactgaattaggacttgatgaactagaaaagcaacaaagt
catttaataagtgcccttgctgcattgaaatcagaaaaaacccaccttcgattcggagga
gatcttcgtttcccaattggaatggtatcagcaatgctatcgagttcttacgcgtatttt
cacatggcctcagtgatgcaaccatttttaacgtgcttatcgggagctctaaaacctgat
gccttcttcaatccagtcatgtcaaaacgattcttagtcgctcttacatcatgtgaatct
tctctcaatgatgctcttgcggaatggtcatctttgtgccgagctagtttttgtgctgat
ccaacatcattcgatctcataactcttttctatctgcgcatctcaattcttctggtggct
gtcaaagttctcctgaagaagcaatctccagatacaatcatccaaataccggcattaagg
aatgcgcggacatgctcactacttcaaagagaaagacttgagtgggctatcaataaaatt
cggacccttcaatctatcagcacaccgaatatcaatatcatcaaaactctctacacaatc
acggaacaactcgccacaactccatacatgcttcccagatttttcttccaacaattctac
ttcgtggatttcaagttatcaacaactccacaagctgaaagaaacgaaacagtgactgtt
atgagtggggatacagttcctgttcgcgttgatggtgcaattacttcaactcatccatca
ccaattcgttcgattattgtctttgcggaagtcgtgtgtccgaccagtcatactaaaagc
caaattttgaaagaagtagttgatccgactgataacaagtacttcactgctcaatttctt
ctcacattcaaaacgacatgcgaagtgaaattccgaatagagtttattgatcaaatttct
cggaagcagtggaatgccgatggaggattgacacttccgatcatggttcgggaaaaacca
caaccaactgtacccgagatgagacgagggccagtgtccattccaactgatcccagacaa
atggttcgaaactcaatgttccctcttccagaccacatctaa
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