KEGG   Caenorhabditis remanei (nematode): GCK72_005409
Entry
GCK72_005409      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GCK72_005409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crq03019]
    GCK72_005409
Messenger RNA biogenesis [BR:crq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     GCK72_005409
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     GCK72_005409
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 9821706
NCBI-ProteinID: XP_003117350
UniProt: E3LFE9
LinkDB
Position
II:complement(<8703963..>8704386)
AA seq 125 aa
MDLPDPYLPGAISLFEQLDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYF
CETGQGFMLIRGENVELAGEIDDSIPTGLTQVSPEEFRRIEDEYLAKNPPKFLKRQAEKT
EEHEA
NT seq 378 nt   +upstreamnt  +downstreamnt
atggatttgcctgatccgtaccttccaggagccatcagtctattcgaacagttagacaag
aagttgttagtcgtgctccgcgatggacgaaagcttattggttttttgagatcgattgat
cagtttgccaacttgatactcgaagatgtagtagagcgaacatttgtagaaaagtatttc
tgtgaaacaggtcaaggattcatgcttatccgtggagaaaacgtagaattggccggtgaa
atcgatgacagtattcccacaggacttacacaggtatcacccgaagagtttcgacgaatt
gaagatgagtatctcgcgaagaatccgccaaaatttttgaaacgtcaagcagagaagaca
gaagagcacgaagcatga

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