Caenorhabditis remanei (nematode): GCK72_005409
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Entry
GCK72_005409 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCK72_005409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_005409
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GCK72_005409
mRNA degradation factors
5'-3' decay
Lsm complex
GCK72_005409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
9821706
NCBI-ProteinID:
XP_003117350
UniProt:
E3LFE9
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All DBs
Position
II:complement(<8703963..>8704386)
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AA seq
125 aa
AA seq
DB search
MDLPDPYLPGAISLFEQLDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYF
CETGQGFMLIRGENVELAGEIDDSIPTGLTQVSPEEFRRIEDEYLAKNPPKFLKRQAEKT
EEHEA
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcctgatccgtaccttccaggagccatcagtctattcgaacagttagacaag
aagttgttagtcgtgctccgcgatggacgaaagcttattggttttttgagatcgattgat
cagtttgccaacttgatactcgaagatgtagtagagcgaacatttgtagaaaagtatttc
tgtgaaacaggtcaaggattcatgcttatccgtggagaaaacgtagaattggccggtgaa
atcgatgacagtattcccacaggacttacacaggtatcacccgaagagtttcgacgaatt
gaagatgagtatctcgcgaagaatccgccaaaatttttgaaacgtcaagcagagaagaca
gaagagcacgaagcatga
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