KEGG   Caenorhabditis remanei (nematode): GCK72_005495
Entry
GCK72_005495      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K12590  exosome complex component RRP46
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GCK72_005495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crq03019]
    GCK72_005495
Messenger RNA biogenesis [BR:crq03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     GCK72_005495
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 78774099
NCBI-ProteinID: XP_053589406
UniProt: A0A6A5HGQ4
LinkDB
Position
II:complement(9055733..9056473)
AA seq 214 aa
MAGRLREMRCELSFLKNADGSACFSQGSTCIWASCSGPGDVHASKANEEAMTLDISYRAN
CGDNKFSVLNNIIQSTISKAINLELFPHTTIAVTIHGIQDDGSIGAVAINGACFALLDNG
MPFEAVFCGVLVVRLKDELIIDPTAKQEASSTGRVLFAVCNGADGHPEVCSMDAIGQWDF
NQLEAAWSLAQPSATAIFEFYRSVMQRKHSIDEH
NT seq 645 nt   +upstreamnt  +downstreamnt
atggctggaagattacgagagatgagatgtgaactgtcatttctgaaaaatgcagacggt
tcagcatgtttctcacaaggatccacgtgtatttgggcgtcgtgtagcggtcctggagac
gttcatgcctcgaaagcaaacgaagaagcaatgacgctggatattagttacagagctaat
tgtggagacaataagttcagtgtgctgaacaacatcattcaatcaacaatatcaaaagct
ataaatctcgagttattcccacacacaacgattgccgtcacaattcatgggattcaagat
gacggtagcattggagcagtagctatcaatggagcgtgctttgctcttcttgacaatgga
atgccattcgaagcggttttctgtggggttcttgtagtccgattgaaagacgagctcatt
attgatccgacggcaaaacaagaagcttcttctaccggaagagttttgtttgctgtgtgt
aatggagccgatggacatcctgaagtatgctcgatggatgcgattggacaatgggatttc
aatcaattggaagctgcgtggagtctagcacagccgtccgcaactgcgattttcgaattc
tacagaagcgttatgcaaagaaaacattccattgatgagcattaa

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