Caenorhabditis remanei (nematode): GCK72_005510
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Entry
GCK72_005510 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04137
Mitophagy - animal
crq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GCK72_005510
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
GCK72_005510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_005510
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_005510
04131 Membrane trafficking [BR:
crq04131
]
GCK72_005510
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crq04147
]
GCK72_005510
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GCK72_005510
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
GCK72_005510
Membrane trafficking [BR:
crq04131
]
SNARE
SNARE associated proteins
Others
GCK72_005510
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GCK72_005510
Exosome [BR:
crq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GCK72_005510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_22
AAA_2
TIP49
AAA_14
RNA_helicase
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
NPHP3_N
ABC_tran
AAA_17
AAA_18
AAA_7
IstB_IS21
Vps4_C
ATPase_2
ResIII
NB-ARC
nSTAND_NTPase5
Viral_helicase1
DUF815
TsaE
NACHT
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
9822426
NCBI-ProteinID:
XP_003117138
UniProt:
E3LFQ3
A0A261B067
LinkDB
All DBs
Position
II:<9084690..>9087760
Genome browser
AA seq
809 aa
AA seq
DB search
MASVPTHQSEKEKKNDELSTAILKDKAKPNRLIVDQSEQDDNSVVSVSQAKMDELGLFRG
DAVILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRI
HVLPIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPAC
IVSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIG
IKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECE
KNQPAILFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSID
GALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLAEDVDLEQIANECHGFVGADLASL
CSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNT
TWADIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE
CQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKSRGGGAGGDA
GGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASR
LQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKDR
QDRRARGEELMEDDTADPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFG
NNFKFPGEQRGSDAPAAAAPSQDDDDLYN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgtccccacgcatcaaagcgaaaaggagaagaaaaatgatgaactctctaca
gccatcttgaaggataaggcaaagccgaatcgcttgattgtggaccagtcagaacaagac
gataactccgtcgtatctgtttcccaagccaagatggatgaactcggcctcttcagagga
gacgctgtaattctcaagggaaaaaagcggaaggagtcagttgcaatcatcgtatccgac
gagtcttgccctaacgaaaaggttcgcatgaaccgagttgttcgcaacaatctccgtatt
cgcctcggagatgttgtcagtattactccagctccaaacctcagctatggaactaggatt
catgttctccccattgacgataccattgaaggactcacaggaaacctttttgatgttttc
ctcaagccttatttcctcgaagcttaccgtcctctacataaaggagatatattcacagtt
caagctgccatgagaacagtcgagtttaaagttgttgaaacagaaccggctccggcttgt
attgtttcccctgatacaatgattcattatgaaggagacccgattaagagagaagaagag
gaagaaagcatgaatgatattggttacgatgatttgggaggagttcgtaagcagttggct
caaatcaaggaaatggtagagttaccgcttcgccatcctcagctcttcaaggcgattggt
atcaaaccaccacgcggaatccttctttttggaccaccgggaacaggaaaaacgctcatt
gcccgtgctgtagccaatgagacaggatcattcttcttcctgattaatggtccagaagtc
atgtcaaaaatgtctggagagtctgagtctaatcttcgcaaggcatttgaggaatgtgag
aaaaatcaacctgcaattcttttcattgatgagattgacgccattgctccaaaacgtgag
aagacaaatggtgaggtggagcgtcgtattgtttcacaacttcttactcttatggacgga
gttaagggtcgttccaatcttgttgtcattgctgctaccaatcgaccaaactccatcgac
ggtgctcttcgccgtttcggacgatttgatcgagaaattgatatcggcatccctgatgct
gttggacgcctggagattctccgtattcataccaagaacatgaaacttgctgaggacgtc
gatcttgaacaaatcgcaaacgaatgtcatggatttgtcggagctgatttggcctcatta
tgctcagaagctgctcttcaacaaattcgtgaaaagatggagctcatcgatcttgaagat
gatcagattgatgctgaagttcttaattctcttgctgtcacaatggaaaatttccgcttt
gcacaaggaaaatcgtccccatctgctttacgcgaggccgtcgttgagactcctaacact
acttgggctgacattggtggtcttcaaaatgtgaagcgcgagcttcaggagttggttcaa
tatcctgttgagcatcctgaaaagtatctcaaattcggaatgcaaccatcgagaggtgtt
cttttctatggtccaccgggatgtggtaaaacattgctcgctaaggcaatcgccaacgag
tgccaagccaatttcatctccattaagggaccggagttacttaccatgtggttcggagag
tccgaagccaatgttcgagatgtgtttgacaaagctcgcgctgctgctccgtgcgtgctt
ttcttcgacgagttggattcaattgctaaatccagagggggtggagctggaggcgatgct
ggtggcgcttcagatcgtgtcatcaatcaagttctcacagagatggatggaatgaacgcg
aagaagaacgttttcattattggtgctaccaacagacctgatatcatcgatccagctgtt
cttcgtccaggtcgtctggatcagttgatttatattccgctgccagatgaagcatctcgt
cttcaaattctcaaggcatctctccgtaaaactccactttcaaaggacctcgacttgaca
ttcttggccaagaacactgttggattctcaggagctgacttgacagaaatttgtcagcgt
gcctgcaagttggctattcgcgagtcaattgagaaagaaattcgaatcgaaaaagaccgc
caagatcgtcgtgctcgtggcgaggagctcatggaggatgacactgctgatccagttcca
gagataactcgtgctcatttcgaggaggctatgaagttcgcaagacgttcagtgactgac
aacgatataagaaaatacgaaatgttcgctcaaacgctccaacagtctcgtggttttgga
aacaacttcaagttcccaggagaacagcgtggtagtgatgctccagcagctgcagcgcca
tctcaggacgatgatgacctgtacaattga
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