KEGG   Caenorhabditis remanei (nematode): GCK72_005710
Entry
GCK72_005710      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K03094  S-phase kinase-associated protein 1
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03083  Polycomb repressive complex
crq04120  Ubiquitin mediated proteolysis
crq04141  Protein processing in endoplasmic reticulum
crq04310  Wnt signaling pathway
crq04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    GCK72_005710
   04120 Ubiquitin mediated proteolysis
    GCK72_005710
  09126 Chromosome
   03083 Polycomb repressive complex
    GCK72_005710
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    GCK72_005710
   04350 TGF-beta signaling pathway
    GCK72_005710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crq04131]
    GCK72_005710
   04121 Ubiquitin system [BR:crq04121]
    GCK72_005710
   03036 Chromosome and associated proteins [BR:crq03036]
    GCK72_005710
Membrane trafficking [BR:crq04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    GCK72_005710
Ubiquitin system [BR:crq04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     GCK72_005710
   Cul7 complex
     GCK72_005710
Chromosome and associated proteins [BR:crq03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     GCK72_005710
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     GCK72_005710
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 9797599
NCBI-ProteinID: XP_003102479
UniProt: E3MN22 A0A261AYM6
LinkDB
Position
II:complement(<9946285..>9946869)
AA seq 179 aa
MPKKNNSKRPQASSMKPTTPPRMIQLTSSDGILLQADIRALILSSTLASTIKELGYDKED
CTDFKPLPVNNVIAFTLKLVIEWCDKHKEDDPAIAQAEKDKKNIFIPSWDRHFLGRLPMS
NLFDLITAAYHLDITGLINYGCKTVANSAKGKSTEEMRELFGIPEPWEQPSTSTATWDD
NT seq 540 nt   +upstreamnt  +downstreamnt
atgccgaagaagaataattctaagcgaccacaagccagctctatgaaacctacaactcca
cctcgaatgatacagctgacgtcgtcagatggaatcttattgcaagcggacattcgtgca
ctcattctctccagtactctcgcctctaccatcaaagaacttggttacgataaagaagat
tgcaccgatttcaaaccattacctgtgaataatgtcatcgcgttcaccttgaaactagta
attgaatggtgcgacaaacacaaagaagatgatcccgccatcgcacaggctgaaaaggac
aagaaaaacatattcattccatcctgggatagacacttccttggccgacttcctatgtca
aatctctttgacttgattactgccgcctatcatttggatattactggactcatcaactat
ggctgcaaaactgttgctaattcagccaaaggtaaatcaaccgaagagatgcgtgagctg
ttcggaattcctgagccatgggaacaaccctcaacatctactgccacttgggacgactga

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