Caenorhabditis remanei (nematode): GCK72_005773
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Entry
GCK72_005773 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K17926
sorting nexin-14
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
crq04990
]
GCK72_005773
Domain-containing proteins not elsewhere classified [BR:
crq04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
GCK72_005773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
MMR_HSR1
RGS
GTP_EFTU
FeoB_N
YqeH-like_C
Dynamin_N
Ras
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
9797749
NCBI-ProteinID:
XP_053589527
UniProt:
A0A6A5HDH7
LinkDB
All DBs
Position
II:<10187891..>10193866
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AA seq
1659 aa
AA seq
DB search
MLGEKMLSLDPSYQKIVEKRTPKSVTSPEPSSEHPITFPLKSMNINTISSSSSSTDIFSN
GNGVGKSSDGDRGFYVEADVFVDEYVAGSSLDLDPGDRMVATREYYGSDDAVERISFQKP
GQRMAGVEENEQKGSSNTSDNIDDPEISTMTGTIVEDMPASSTKCTGCGANFHCKDSSLP
GFVPLEILEKIDRKTIFHHKNENPPQSLCKRCHLLQEHNFLLNVNVCDVDYSRMMSELRK
QPESLVVLVVDVTDLPGSIYPKLAQVVGSRRPMIVVGNKVDLLPPDAKTGYMYRFKKTVE
RAVEKAGLLEHFNILHTALVSAKTGHGIEELITEIYLKYTNVRLGMRGDIFLVGCTNAGK
STMFNALLQSDLCKVRAVDLVDRATTSIWPGTTISLLKFPVMKPGPYRLEMRRRRLLTHR
AWNKKEMYARKLLLAETGDDRYAIPTSVIQNTYKDSEEELQPMALKELQGGEEDEDDVQR
RNEERSKYSLDDPIFAKGKWCYDTPGTVNQNQVLSLFTLDELVNVTPRRVLKPRTAIVKA
GESLLIGGVGRIDVESIAGYANVLLTTFANDQLPLNVMPTHEVEEFYRKWLGTPSLVVPQ
GDITRMASWPEFKDDNNEIGRRFEMKGRKDEGCCDIVLSSIGWVMVTSEKDVVLSAFSPA
NKGLTARIQPILPYSASLRGKRLPGSQFYKVQPIEFPVNRIHVAAAVVLLTAIFYAAGFG
FGSIFLVVGSLIGGVLFARWIFECSNGELLFQWKDYFNATAAPVDLNSEEDDAKTDTAKT
RQMPWQDLTLPASLNEAVESLLCEIVEQYVNGWYGGAISRDRAFINEIKYQLRYASANLV
RCIRRVDLSRFVADEALPIASFHVSRLTELELKLRTSNGPPRSLLESKIAEQLDDIHVAL
SGREEETAYVRQIADFLIPRLLDETRLAGRAHDDDSPLRLFGRGKNERPWPSKSMRGFLR
EMLTNAVLLPVFDMLTQPDTINYWLILLFDEDRNVEMIEEHIDTTPIPLLKGLCDDSSSS
SDNIPDSLLQLKLTEVLRDARLYSIFRMYLQDIRGPVHELQFLVEATRILESIQRKSESS
SQIAYDIWQLYGQFVHESSQERVRLNEKLVEQYKSAVEVNDLSVLEEIIELSYQEVYNRT
QSTHVVSFCQSECFLGYLCGSPPVTINELIDQQDRQRVAAPVERTFSLSQLRARVRKALT
SVGDEEKEEIGGGSGGGVETPESQGGSSSSSYVNIAVPSIDVISADGNIEEGVEEPETPV
PIPTNPGLVMDPEPIDLNCWKVNVSQVSGLRDRITDRTIFVFIIEVERPDAKPHETQRWS
IHRSFNEFYVLESKLNEFHGDSLRFSPLPTRKTFVTRDKPYMEQHRLIFSTFISTLSKQR
LLNRSELLLAFLSSNEEFRDTLSLGDLNPWKVVKKTLPGKLVGREKGQNLKPYLLKALAQ
TLAPADRVEEKSDNLLEDVTPTNSGASLATNAVYSSIYGNNFDNVFKETYKNSDDIQLWT
TSAYDSILLLFWKPLKCQFEWMTPIFTAIRSLCSKTIDSVIRSILANVFQKSLSVANMTY
LIQHVQWSLFCNDAPWPTEQEMKMREELAMRRTLEYFQNNIPIHAQRLIGRDDIKTLLSR
IIDGLQYPRLNKQLLYVLIDRLLLQVFPELDELGQHPLQ
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcgaaaaaatgcttagtctggatccgagttatcagaaaattgtcgaaaaacga
acgcccaaaagtgtgacttctcccgagccaagttcagaacatcctatcacatttccattg
aagtctatgaatataaataccatcagttcttcatcgtcctcgactgacatattctcaaat
ggaaatggtgtcggaaaatcttcagatggagaccgtggtttttatgtagaagcggacgtt
tttgttgatgaatatgtggctggaagttcattggatttagatccaggagatcgaatggtg
gccacaagagagtattacggtagtgatgatgcagttgaacgtatctcattccaaaaacca
ggacagcgaatggctggagtcgaggagaatgagcaaaaaggatcctcaaacacatccgac
aatattgatgatccggaaatatcaactatgaccggaacaattgttgaagacatgccagca
agttctaccaaatgcactggctgtggagcgaatttccattgtaaagacagctcacttccg
ggtttcgtccctttggaaattttggaaaaaatcgacagaaaaacgatttttcatcacaaa
aatgagaatccgcctcaatcactgtgcaagcgatgccatttacttcaggagcataatttt
ctcttgaatgtaaatgtgtgtgatgttgattatagccgaatgatgagtgaattgagaaaa
caacccgaatcgctcgttgttcttgttgtggatgtcaccgatttgccaggaagtatttat
ccgaaattggcacaagtggtcggaagtcgtcgtcctatgattgtagttggtaataaagtt
gatcttctcccacctgatgctaaaactggatatatgtatcgcttcaagaagacggtagag
cgagctgttgaaaaagcaggtcttcttgaacatttcaatattcttcacacagcactagtc
agtgcaaaaactggtcatggaatcgaggaactaatcactgaaatttatttgaaatataca
aatgtcagattaggaatgcggggtgatatatttcttgttggttgcactaacgctggaaag
tcaacaatgttcaatgctcttctccagtcagacttgtgtaaagtgagagctgtggatctt
gttgatcgagcgactacgagtatttggccaggaacaacgatatctctgcttaaattccct
gtcatgaaacctggaccgtatcgtctcgagatgcgtcgtcgtcgcttgttaactcaccgc
gcatggaacaagaaagagatgtacgctagaaagcttcttctagctgaaactggagatgat
cgatatgcaatcccgacgtcagtgattcaaaacacttataaagattctgaagaagagtta
caaccaatggctttgaaagaattacaaggaggagaagaagacgaagatgatgttcaaaga
agaaacgaggaaagaagtaaatattcacttgatgatcctatttttgctaaggggaagtgg
tgttatgatactcctggtacagtaaaccaaaatcaggttctctccctatttacactcgat
gaacttgtcaatgtgactcctcgccgtgttcttaaaccacgtaccgctattgttaaagca
ggagaatctcttcttatcggaggagttggacgaattgatgtcgaatcaattgccgggtat
gccaatgttcttctaaccactttcgccaatgatcaactacctctcaatgtgatgccaact
cacgaagttgaagaattctatcgtaaatggctaggcacgccttctctcgtcgtaccacaa
ggagatataaccagaatggcttcatggcccgaattcaaagatgataacaacgaaattggt
agaagatttgagatgaaagggcgaaaagacgaaggatgctgcgatattgttctatcttct
attggatgggttatggtaacttccgagaaggatgttgtgttgagtgcattctcacctgca
aacaaaggacttactgcacgtattcaaccaattctcccgtattccgcatctctacgtggt
aaacgtctacctgggagtcagttttataaggttcaacctatcgagtttccggtgaatagg
atccacgtggcagccgctgtggttcttctgactgctatattctatgcggctggattcgga
tttggatctattttcttagttgtcggaagtcttatagggggagttttgttcgccagatgg
atattcgaatgttcaaatggagagttactttttcagtggaaggattatttcaatgccaca
gcagcaccagttgacttgaactcggaagaggacgatgctaagacggatacggcaaaaacg
agacaaatgccatggcaagatctcactctccctgcatcattaaatgaagctgtcgagagt
ttgctttgcgaaatcgtggaacagtacgtgaatggatggtatggtggtgctataagcaga
gatcgagcattcataaacgaaataaagtaccaactgcgatacgcatctgcgaatcttgtt
cgctgcattcgtcgtgtcgatctatctcgatttgtagccgatgaggctcttccaattgct
tctttccatgtgtcacgcctaacagaactcgaattaaaacttcgaacttctaatggtccg
cctagatctcttcttgagtcgaaaatagccgaacaacttgacgatattcacgtcgccctt
agtggaagagaagaagaaactgcatacgttcgtcagattgctgattttctgattccacga
ctactagatgagacacgattagctggtagagcacatgatgatgatagtccgttgcgtttg
ttcggaagaggaaaaaacgaaagaccatggccatctaaatcaatgagaggattcttgaga
gaaatgttgacgaatgctgtgttgctcccagtattcgacatgttaactcaaccggataca
atcaattattggttgattttgttgttcgatgaggatagaaacgtggaaatgatagaagaa
catatagacactactccaatcccattgctgaaaggactctgtgatgattcgtcttcttct
tctgataatattccggattcacttcttcaattaaaactgacagaagtgttgcgtgatgct
cgtctctactcaatatttcgaatgtatctccaagatattcgaggaccagttcacgagtta
caatttctcgtcgaagccacacgcattttggaaagtattcaaagaaaatctgaatcttcc
agtcaaattgcctatgatatatggcaactgtatggccaattcgtgcatgaaagttcacaa
gaaagagtccggttgaatgaaaagttggtagagcaatacaagtcagcagttgaagtgaat
gatttatcagttttagaagaaattattgagctgtcttaccaagaagtctacaaccgtact
caatcaactcatgtcgtatcattttgtcaatcggaatgttttcttggatatttatgtgga
tcaccaccagtaaccatcaatgaactaattgatcaacaggatcgacagagggttgctgct
cctgtagaacgaacattctcactttcacaacttagagctcgagttagaaaagctttgacc
tcagttggagatgaagaaaaagaagaaattggaggaggaagtgggggaggagtagagact
ccagaatctcaaggaggttcatcgtcttcatcatatgttaatatagctgtgccatctatt
gatgttataagtgctgatggaaatattgaagagggagtcgaagaaccagaaacaccagtt
ccaattccaacaaatccaggacttgtaatggatccggaaccaatagatttgaattgctgg
aaagtgaatgtgtcacaagtcagtggattgagagacagaattactgacagaactattttt
gtattcattattgaagtggaacgtcccgatgcgaaacctcacgaaactcaacgttggtca
attcatcgatccttcaacgaattctatgtacttgagtcgaagctgaatgaattccacgga
gattctcttcgcttctcaccactgccaactcggaaaacattcgtgactagagataaacca
tacatggaacaacatcgtctgatattctcaacttttatctctaccctcagtaaacaacga
ctgttgaatcgatctgagttactactggcgttcttatcgtcaaatgaagagttcagagac
acactgtcactcggagatttgaatccatggaaagttgtaaaaaagacattaccaggaaaa
ttggttggaagagaaaagggtcaaaatttgaagccataccttctgaaagccctagctcaa
acactggctccagctgatcgtgttgaagagaagtcggataatttacttgaagacgtcacg
cccacgaattcaggagcatctctagccacaaatgcagtctactcttctatatacggaaat
aatttcgacaatgtattcaaggaaacatataagaattcagatgatattcaattatggaca
acttctgcgtatgattcaattttactactgttctggaaacctctgaaatgtcaattcgag
tggatgactcctatatttaccgcgatccgttcactatgctcgaaaacaatcgattcagta
attcgatcgattttagcgaatgttttccaaaaatctctatcggttgctaacatgacttat
ctcattcaacacgttcaatggtcattattctgcaatgatgctccgtggccaacagaacaa
gaaatgaagatgcgagaagagttggcaatgcggagaactctcgaatatttccagaataat
atcccaattcatgctcaacgcttgatcggtcgtgatgacatcaaaactctcctatctcgc
ataattgatggtctacagtatccacgtctcaacaaacaacttctatatgtgctcatagat
cgactacttttacaagttttcccagaacttgatgaactcgggcaacatccgcttcaatag
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