Caenorhabditis remanei (nematode): GCK72_005793
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Entry
GCK72_005793 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crq03016
]
GCK72_005793
Enzymes [BR:
crq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GCK72_005793
Transfer RNA biogenesis [BR:
crq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GCK72_005793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
9797792
NCBI-ProteinID:
XP_053589534
UniProt:
A0A6A5HDJ6
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All DBs
Position
II:complement(10247928..10249677)
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AA seq
468 aa
AA seq
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MTSQKKPLALCEICVRQISGDADNVTKCENSFECQLCFGIMDQAMIDEVGEKVQEELEKL
PYDSNSFILALNLPVGQTLREILVSRLRPDFNGTLVQVPHKVRNVDGYLKKLGSYSGKRP
TLSSDLQLMITFEQTESDLTDLQFLQKEFPNDFRVGKRNRYNHQEAPSSCSKQQLQQVTG
RINEHIANKYIFSSPTRKCSFSLSFERDPVYVAGRYCKYSRCLPQSPWSEDKDAPREPGN
SVSEKVCDILKKHFGASDSKFVTSGREDIDVRMLGTGRPFVVELRNCRITAPVRGLNYLE
TLKSIEETINSQKDIKINSLTRVARDVAEKLSVGEEDKRKQYCAYCYSILPISDEQFATA
RSKIPLTIVQKTPVRVMKRRALLDRERTIFSMDFLKLDDHHFEVRLETQAGTYIKEFVHG
DFGRTRPSLAELLGVEHGEVDILELDVEKVDLEWPPKLKEGQASIKFR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtcagaaaaaacctttggcattatgtgaaatttgtgttcggcaaatttcaggt
gacgcagataatgtcacaaaatgtgaaaattcatttgaatgccaactctgctttggaatt
atggatcaagctatgattgatgaggtcggagaaaaagtgcaagaagagcttgaaaaactt
ccctacgactcaaatagtttcattttagcattaaacttacctgtcggacaaacattgagg
gagattctagtcagtcggcttcgtccggatttcaatggaacacttgttcaagttccacat
aaagttaggaatgttgacggatatttgaagaagcttggatcctattctggaaaacgaccg
acactaagctctgatctgcaactgatgattactttcgaacaaacggaatcagatctcacc
gatcttcagtttctccaaaaagagtttccgaatgattttcgtgtcggaaaacgcaataga
tacaatcatcaagaagctccgtcgagctgttcgaagcaacaattgcagcaggtcactgga
agaataaatgaacatatcgctaacaaatacattttctcttcacctactcgaaaatgctca
ttttctctatcttttgaaagagatcctgtgtacgttgctggaagatactgcaaatactct
agatgtcttcctcaatctccatggagcgaggacaaggatgcaccaagagaacctggaaat
tcagtatctgaaaaagtctgtgatattttgaagaaacacttcggtgcaagtgatagtaaa
tttgtcacatccggtcgtgaagatattgacgttagaatgctcggaaccggaagaccattt
gtcgttgaacttcggaattgtagaatcacagccccagtgagaggtttgaattatctggaa
acgttaaaatcaattgaagaaacaatcaattctcagaaggatattaaaattaattcgttg
acaagagtagctcgcgatgtagcggagaaattaagtgttggggaagaagataaacgaaag
cagtattgcgcatactgttacagcatcttgcctatttctgatgaacaattcgcgacagct
cgatccaaaattcctctaaccatcgttcaaaaaactccagtccgtgttatgaaacgaaga
gcattattagacagagagcggactattttttcgatggattttttgaaactcgacgatcat
cattttgaagtgagactcgagacgcaagcaggaacttacattaaagaatttgtacacgga
gactttggaagaacacgtccatcattggctgaactattaggtgtggaacacggagaagtc
gatattctggaattagatgttgaaaaagtcgatctcgaatggccacccaaattgaaggaa
ggtcaagcttctataaaattccgctaa
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