Caenorhabditis remanei (nematode): GCK72_005934
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Entry
GCK72_005934 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K10348
LRR-repeat protein 1
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crq04121
]
GCK72_005934
Ubiquitin system [BR:
crq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
GCK72_005934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_14
Motif
Other DBs
NCBI-GeneID:
9820882
NCBI-ProteinID:
XP_003109092
UniProt:
E3M4C5
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All DBs
Position
II:complement(10782233..10784005)
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AA seq
454 aa
AA seq
DB search
MRIPCEVVFSRHKTNGNLRQVPDTSKPRKGFVVLEKLRQTPPQYQILFAVNGDKNTNKFD
LNKPPIILDKFVQQGKVTFQFPAVTVYIGKACPESLTKLTDCIRKIVRGEAVEIEKVKIK
SSDFKPTTITVTTQNDYRKQMNMCSEFLRTLKIEPIDLRTADRTWISKCKNITQLIISGN
PIGNRATNLDVFSKLPHLHVLELNNCSLGSVAVPVLCDMFKRLPITLNFLDISENQLSVF
PPIFHLNQLRVINATFNNIKYLPSRIGSLQNLQTISLNHNQMSSLPYVFPKMPRIQHVGL
QANDDLCYTSPEDAGPLITRKLASKVDNNDYSHAGGVDSLVVIAANAIHRDENRKSLRAC
RDFLPLSLRFHVEDLMYETPGISPLEMCTYCLRLRHIRYVRPQLLQSRQIAEAVDVVDRF
VIFDNLLCIDCHRRTPATVDDQTPIQYDFFNFSL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcggataccgtgtgaagtggtattttcacgacacaagaccaacggaaatttgcggcaa
gttcctgataccagtaaaccacggaaaggttttgtcgttttggagaaacttcgccagact
cctccacagtatcaaatattgttcgcagtgaatggtgataaaaataccaacaagttcgat
ctcaacaagcctcctattattttggacaagtttgttcagcaaggaaaagttacatttcaa
tttccagctgtaactgtttacatcggcaaggcatgccctgaatctctgacgaagttgacg
gattgtatcaggaaaattgtgagaggagaagcagtcgaaatcgagaaagttaaaattaaa
agctccgacttcaaaccgactacaatcactgttacaactcaaaatgattacaggaaacag
atgaatatgtgctctgaatttctgagaacattaaaaattgagccgattgatttacgaact
gcggatagaacatggatttcaaaatgtaaaaacatcacacagttgattattagtggcaat
ccaattggaaatcgagccacaaatcttgacgtttttagtaaacttcctcacttacatgtt
ctggaattaaacaattgttcgttgggatctgttgctgtcccagtgctctgtgacatgttt
aaacgactgccaatcactttgaatttcttggatattagcgagaatcaattatcggttttc
ccgcctatctttcatctgaatcaacttcgagtgatcaacgcaacattcaataatataaaa
tatctaccatcaaggattggctcactgcaaaacctccaaaccatatccctcaaccacaat
cagatgtcctcgttgccttatgtatttccaaagatgccaagaatacaacatgtcggtctt
caagcgaacgacgatttgtgttacacaagtccagaggatgctggaccgctgattacccgg
aaacttgctagcaaggttgataataacgattattcacatgctgggggtgtcgattcgttg
gtggtgattgcagcaaatgctatccacagggacgaaaacagaaagtcattgcgagcatgt
cgtgattttctaccactttctcttcgttttcatgtggaggacttgatgtatgaaacacct
ggaatttcaccactagaaatgtgtacatattgcctacgtcttcgtcacattcgttatgtt
cgtcctcaacttttacaatcgaggcaaattgccgaggctgtagacgttgttgatagattt
gtaatttttgacaatcttctgtgtattgactgccatcgtagaacacctgccacagtcgat
gaccagactcctattcaatatgacttcttcaacttctcattataa
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