Caenorhabditis remanei (nematode): GCK72_006030
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Entry
GCK72_006030 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04080
Neuroactive ligand-receptor interaction
crq04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GCK72_006030
04082 Neuroactive ligand signaling
GCK72_006030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crq04040
]
GCK72_006030
Ion channels [BR:
crq04040
]
Ligand-gated channels
Glutamate (ionotropic)
GCK72_006030
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Ion_trans_2
YuA_Gp49
DNA_pol3_a_NI
Motif
Other DBs
NCBI-GeneID:
9820852
NCBI-ProteinID:
XP_053589639
UniProt:
A0A6A5HHD1
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Position
II:complement(<11124129..>11128300)
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AA seq
886 aa
AA seq
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MIPTDLSVRFVLAQPILYTKKKIISQMFRILVYFIWILIQFVNAIDYKVSVLIVAEPNQD
TFDELKVSVTNAFVEVFGSTSYHLGNDTITAAFVDAKSGENRLELTQDIVCSQMLNSSLA
SVIFSPSLTSSARFIDLVTSSAYTLSFYKIPVVGVMVRDAEFSKKNIYPTFVRPTAPLSD
EAFVFLHMLLRLQYRQVVVVIVKRDINADQFVAEFEKRRVEFKIIVQQYIEVELNENLND
TLAESFEEVTSNIILLFAKKDDAVRIFANAGDLTGKGKVWIVSESAGEAHNVPNGSLGCR
LGQTALSVLRDSFSILKSAMETVFRESKIDIFPPVECDRDSVDAEWNSMQAPALLNEICG
TSTSRIHFNDRCERIGVEYDIINFHMERRQVGDLLRLDEESIEWAGGTKPLEISLPKHLR
VVTVADPPFVYTTPVGSPSQCTELGSTVVEWSIFDKIVVPGPWYSCPMTSANTTEYFCCA
GLAIDLLSNLSLPEANNSIDTSFTFSLHLNESYGVIQAAETTGITIGGVIGELDGDTADM
AIGGITINPERERIVDFSEPWLYHGIRILEKNIPRDSPMQSFLQPLQSSLWTALFISVLL
VGLAIYCLDFKSPFERFYQADKEMEQDLKKEFELWIGKGADENVNFGEAMWFVWGVLLNS
GVSEKTPRSCSARVLGIVWCGFCMIMVASYTANLAAFLVLDQPEKGLTGLRNPSANFSFG
TVLNSNVYQYFKRHVELSSMFRKMEPHNVRRASEAVHSLLNGSLDAFIWDSTRLEFEAAR
HCELRTRGSLFGRSAYGIGLQKNSPWTPHITSAILRMSESGVMENLDQKWIDRGGPNCVV
EAHKSPARLGLVNMKDIFILVSSGVALGIFLSFVEVSYGRWLADKG
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgattccaacagatttaagtgttcgattcgtcctggctcaaccgatactctatacaaag
aagaaaattatcagtcagatgtttcgaatattggtctactttatatggatattaatacaa
tttgtaaatgcaatagattacaaagtatcagttttgatagtagctgaaccaaatcaagat
actttcgacgaattaaaagtctctgttacgaatgcatttgtggaggtattcggaagtacc
tcatatcaccttggaaatgacacaattacagctgcttttgttgatgcaaaaagcggagaa
aatcgtttggaactgacacaagatatagtatgcagtcagatgttgaactcatctcttgcc
tcagtcatcttttctccatctctgacatcttcggctcgattcattgatcttgtcacatct
tctgcttacacactttcattttataaaattccagttgtcggagtcatggttagagatgct
gaatttagtaaaaagaatatttatccaacatttgttcgtccaacagcaccactttctgat
gaagcatttgtatttctacacatgttgctcaggcttcagtatcggcaggtagttgttgtg
attgtaaaacgggatataaatgcggatcagtttgttgctgaattcgagaagagaagggtt
gagtttaagataattgttcaacaatatatagaagttgaattgaatgagaacttgaatgat
acactggctgaaagttttgaagaagtcacttcaaatataatattgttatttgcaaaaaaa
gacgatgctgttcgaatatttgcaaatgcaggtgatttgacaggaaaaggaaaagtgtgg
atagtgagtgaaagtgctggagaagcacataatgtaccgaatggatcacttggatgtcga
ctcggacagacggctctttctgtgttgagagactcattctcaatcctgaaatctgcaatg
gaaacggtatttcgtgaatcgaaaattgatatttttcctccagtggaatgtgatagagat
agtgtcgatgctgaatggaactcaatgcaagctccggcacttttgaatgaaatatgtgga
acatctacaagtcgaatacattttaacgatagatgtgaacgaattggagtggaatatgac
ataattaattttcatatggaaagaagacaagttggtgacttactccgtttagacgaagaa
tcaattgaatgggctggcggaacaaaacctttagaaatctctcttcctaaacatttacga
gtggtcactgtagctgatcctccattcgtttacacaactccagtcggctcaccgtctcaa
tgtacagaacttgggagtactgtagtcgaatggtccatatttgataaaattgttgtgcct
ggtccttggtattcatgtccgatgacttctgcgaatacgactgaatatttctgttgtgct
ggtctggcaattgatcttctctcgaatttatcattaccagaggcgaataattcaatcgat
acaagtttcactttttctcttcatctaaatgagtcatatggagtgatacaggcagcggaa
actacaggaataactattggtggtgttattggagaactagatggagatacagctgatatg
gcaatcggtgggatcacaataaatccagaacgagaaagaatagttgatttctctgagcca
tggttgtatcatggaatcagaattttggagaaaaatattcctcgtgattccccaatgcaa
tcattccttcaaccactccaatcttctctctggaccgcccttttcatttctgtacttctc
gttggcctcgctatttattgtttggatttcaagtcaccattcgaaagattttatcaagca
gataaagaaatggaacaagatttaaagaaagaattcgaactttggattggaaaaggtgca
gatgaaaatgtgaatttcggcgaagcaatgtggtttgtatggggagttttattgaatagt
ggagtgtctgaaaagacaccaaggagttgttctgctcgagttctcggtatagtttggtgt
ggattttgtatgattatggtggcatcttacactgctaatctagcagcgtttttagttttg
gatcagccggaaaagggattgactggtcttcgtaatccatctgcaaacttctcattcggc
actgttctcaattcaaatgtctatcaatatttcaaaagacacgtggaactatcttcaatg
ttcagaaaaatggagccacataatgtgcgtcgtgcttctgaggcagttcactctcttctg
aacggatctttagatgctttcatttgggattcgactcgtttagaattcgaagcagcacgt
cattgtgaactgaggacacgtggaagtttatttggaagaagtgcttatgggataggttta
caaaagaatagtccgtggacaccacatattacttccgcgattttaagaatgtctgaaagt
ggagtcatggaaaacttggatcagaaatggattgatagaggtggtccgaactgtgtggta
gaggcacataagtcacctgcgaggctcggattggttaatatgaaggatattttcatactt
gtttcatctggagttgctcttggaatctttctcagttttgtggaagtgtcatatggaaga
tggctggctgataaagggtaa
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