Caenorhabditis remanei (nematode): GCK72_006103
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Entry
GCK72_006103 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_006103
03041 Spliceosome [BR:
crq03041
]
GCK72_006103
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
GCK72_006103
Spliceosome [BR:
crq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
GCK72_006103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
PHM7_cyt
RRM_PARP14_3
RRM_7
Nup35_RRM_2
RRM_Nup35
RRM_3
Calcipressin
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
9800322
NCBI-ProteinID:
XP_003108869
UniProt:
E3M4U4
LinkDB
All DBs
Position
II:complement(11345501..11347279)
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AA seq
404 aa
AA seq
DB search
MAFFNPPAVAPYTDEVNTGYNARMHSKLAEREGFHLGNGSDEPRTLYVGNLDPSVSEDLI
ATLFNQIGSVTKTKVIFDGANDPYAFVEFLDHSQASQALQTMNKRLLLDREMKVNWAVEP
GQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVS
YPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPTHYNEKSYDEIYNQTSGDNTS
VYVGNIANLSEDEIRQAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGG
QLVRCSWGKTGDTGKAAGGSYGYGYGGPSAGGNSQSYQGYGGGGYGAGHQGGHGGSSQQQ
SNANNQYWQYYAQYYNNPQLMQQWSNYWQQQGGAPQQQNAGSQQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcctttttcaacccacccgctgtcgctccttatactgacgaagttaataccggctac
aatgctcgcatgcattcaaaactagcggaaagagaaggatttcatcttggaaatggttct
gatgaaccacgaactttatatgttgggaaccttgatccatcagtcagtgaagacttgata
gctacattattcaatcagataggctcagttacgaagacgaaagtcatattcgacggtgcg
aatgatccatacgcgttcgttgagttcttggatcacagtcaagcttcgcaagctctacaa
acaatgaacaagagacttcttcttgatagagaaatgaaagtaaattgggcagttgagccg
ggacaacaaccatcgaaagtagataccacgagacattttcatgtgtttgtcggagatctt
tcatcagaagttgacaaccagaaactccgtgaagctttccaaccatttggagatgtctct
gatgctaaagttattcgtgatacaaacactacaaaatctaaaggttacggatttgtctca
tatccgaagagagaggaggctgagcgcgccattgaacagatgaacggacaatggctcggt
agaagaacgattcgtaccaattgggctacaagaaagcctggagatcaagaaaaaccaact
cattacaatgagaagtcgtatgacgagatctacaaccaaacatcaggagataatacttca
gtctatgttggaaatattgctaatctctcagaagatgagattcgtcaggctttcgccagc
tacggtcgaatttcggaagttcgtattttcaaaatgcaaggatatgcttttgtgaaattt
gacaacaaggatgcggctgcgaaggccatcgttcagatgaacaatcaagaagtcggggga
cagctcgttcgttgtagctggggaaaaactggcgacactggaaaggcagcaggaggatca
tatggctatggttatggaggtccatcggctggcgggaactcccaatcctatcaaggttat
ggtggaggcggatacggtgcaggtcatcaaggaggccacggcgggtcgtcgcagcaacaa
tcaaacgctaataatcaatactggcaatattatgcacagtattataataacccccagcta
atgcaacaatggtcaaattattggcaacaacaaggaggagctccacagcaacagaatgcc
ggaagccaacaatag
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