KEGG   Caenorhabditis remanei (nematode): GCK72_006242
Entry
GCK72_006242      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq04120  Ubiquitin mediated proteolysis
crq04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    GCK72_006242
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    GCK72_006242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:crq04121]
    GCK72_006242
   03036 Chromosome and associated proteins [BR:crq03036]
    GCK72_006242
Ubiquitin system [BR:crq04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     GCK72_006242
Chromosome and associated proteins [BR:crq03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     GCK72_006242
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_C WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_EML Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 Beta-TrCP_D Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_SPT8 WD40_like Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_WDR11_2nd Beta-prop_WDR19_1st F-box Elongin_A CDtoxinA DUF6188 F-box-like
Other DBs
NCBI-GeneID: 9815539
NCBI-ProteinID: XP_053589732
LinkDB
Position
II:11869975..11872630
AA seq 659 aa
MSSPHPASTTQQLADLSLTEEGEHDEGKPLSVDYLQGHGDLIEEVLKWSEHEQIDFMGKI
VNRLSHYQLGKVDTFIRPMLQRDFITNLPAHLVELTLFNVNAESLKACEKVSTSWRCALA
RGQHWKKLIEKNVRSDSLWWGLSEKRHWDKFLNIGREMSVLRICEKYGYDPSAKREKLEQ
LILMHVFYSKLYPKIIKDIHNIDSNWKRGNYKMTRINCQSENSKGVYCLQYDDDKIVSGL
RDNTIKIWNRKDYTCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLI
HHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIV
SASGDRTIKVWSMDTLEFVRTLSGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLR
VLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPRALATEICLCSLVQHTGRVFR
LQFDDFQIVSSSHDDTILIWDFLDAPVLQNAPVRATLPELPNQAAVARGLMLFEMAARRE
IERRDREIIEEQQPRVVPRGNNGRRVQEAAMIVVGNAVNRNPPVDNDGSSSDEELERGDQ
AHPPAQPHNQNHRRRQPRPELPVRLMQEMNAAFDLRRPHHNLDHLAGGDIDEEMPEGRP
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgtcttcgccccaccctgcttcaacgactcagcagctggcagacttgtcgttgacggaa
gaaggcgaacatgatgagggcaaaccgctttctgtcgactaccttcaagggcatggggat
ctgatcgaggaggtattaaaatggagtgagcatgaacaaatcgattttatgggcaaaata
gttaatcgattatcacattatcaactggggaaagtcgatacatttataaggcccatgctt
cagagagattttatcactaatttacctgcgcatctcgtggagttgacactcttcaatgtg
aacgcagagtccctgaaagcttgcgaaaaagtgagtacaagttggcgatgtgcattggct
cgtggacagcactggaagaaattgattgaaaagaatgtgagaagtgattccctttggtgg
ggactttctgaaaaaagacactgggataaatttctgaacattggccgagaaatgtcagtt
ctccgtatctgtgagaaatatggttacgatccatccgccaaacgagaaaaactcgaacag
ctcattttgatgcacgttttctacagcaagctgtatccaaagattatcaaagacattcac
aatatagacagtaattggaaacgaggaaattacaagatgactcgtatcaattgtcaatcg
gagaatagcaaaggagtctactgtcttcaatacgacgatgataaaattgtatcgggattg
agagataacaccattaagatctggaatcgaaaagactacacctgtagtcgaattctctcg
gggcataccggatctgttctatgccttcagtacgataaccgtgtcattatttctggatct
tccgatgctaccgttcgtgtttgggatgttgaaactggtgaatgcataaaaaccttgatc
caccattgtgaagctgtactccatcttcgattcgctaatggaattatggtcacctgctca
aaagatagatcgattgctgtttgggatatggtatcgccacgggatattactatacgaaga
gttcttgttggccaccgtgcagctgtgaatgtcgttgattttgatgatagatacattgtc
agtgcgagtggagatagaactatcaaagtctggtcaatggatactttggaattcgtgcga
actctttctggtcacagacgtggaattgcttgtcttcagtatcgtggacgactcgtggtt
tctggatccagtgataatacaattcggctttgggatatacattctggtgtctgtctacgt
gttcttgaaggtcacgaagaactcgttagatgcattcgattcgacgagaaacgtattgtc
tctggagcctacgacgggaaaatcaaagtgtgggaccttcaagctgcccttgatccacgt
gctctcgcaactgaaatttgtctatgctccttagttcaacacactggaagagttttccgt
ttgcaattcgatgatttccaaattgtctcatcttctcatgatgacactattctcatttgg
gacttcttggacgcaccagtgctacagaatgcacccgtcagagccactctgccagagctc
ccgaatcaagctgccgttgctcgcggcctaatgctcttcgaaatggctgcaagacgtgaa
attgaacgtcgtgatcgagaaattattgaagaacagcaaccaagagtcgtacctcgtggc
aataatggtcgtcgagtccaagaagcagcaatgattgtagttggtaatgcagtcaatcgc
aatccccccgtagacaatgatggatcatcgtcagacgaagaacttgaacgtggagatcaa
gcccatcccccagcacaaccgcacaaccagaatcatagaaggagacagccaagacctgag
ctgccggtgaggctcatgcaagaaatgaatgctgcattcgatttgcgacgaccgcatcac
aacttggaccatttagctggtggagatatagatgaagagatgcctgaaggcagaccataa

DBGET integrated database retrieval system