Caenorhabditis remanei (nematode): GCK72_006242
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Entry
GCK72_006242 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04120
Ubiquitin mediated proteolysis
crq04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GCK72_006242
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
GCK72_006242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crq04121
]
GCK72_006242
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_006242
Ubiquitin system [BR:
crq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
GCK72_006242
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
GCK72_006242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-TrCP_D
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_like
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_WDR11_2nd
Beta-prop_WDR19_1st
F-box
Elongin_A
CDtoxinA
DUF6188
F-box-like
Motif
Other DBs
NCBI-GeneID:
9815539
NCBI-ProteinID:
XP_053589732
LinkDB
All DBs
Position
II:11869975..11872630
Genome browser
AA seq
659 aa
AA seq
DB search
MSSPHPASTTQQLADLSLTEEGEHDEGKPLSVDYLQGHGDLIEEVLKWSEHEQIDFMGKI
VNRLSHYQLGKVDTFIRPMLQRDFITNLPAHLVELTLFNVNAESLKACEKVSTSWRCALA
RGQHWKKLIEKNVRSDSLWWGLSEKRHWDKFLNIGREMSVLRICEKYGYDPSAKREKLEQ
LILMHVFYSKLYPKIIKDIHNIDSNWKRGNYKMTRINCQSENSKGVYCLQYDDDKIVSGL
RDNTIKIWNRKDYTCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLI
HHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIV
SASGDRTIKVWSMDTLEFVRTLSGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLR
VLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPRALATEICLCSLVQHTGRVFR
LQFDDFQIVSSSHDDTILIWDFLDAPVLQNAPVRATLPELPNQAAVARGLMLFEMAARRE
IERRDREIIEEQQPRVVPRGNNGRRVQEAAMIVVGNAVNRNPPVDNDGSSSDEELERGDQ
AHPPAQPHNQNHRRRQPRPELPVRLMQEMNAAFDLRRPHHNLDHLAGGDIDEEMPEGRP
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgccccaccctgcttcaacgactcagcagctggcagacttgtcgttgacggaa
gaaggcgaacatgatgagggcaaaccgctttctgtcgactaccttcaagggcatggggat
ctgatcgaggaggtattaaaatggagtgagcatgaacaaatcgattttatgggcaaaata
gttaatcgattatcacattatcaactggggaaagtcgatacatttataaggcccatgctt
cagagagattttatcactaatttacctgcgcatctcgtggagttgacactcttcaatgtg
aacgcagagtccctgaaagcttgcgaaaaagtgagtacaagttggcgatgtgcattggct
cgtggacagcactggaagaaattgattgaaaagaatgtgagaagtgattccctttggtgg
ggactttctgaaaaaagacactgggataaatttctgaacattggccgagaaatgtcagtt
ctccgtatctgtgagaaatatggttacgatccatccgccaaacgagaaaaactcgaacag
ctcattttgatgcacgttttctacagcaagctgtatccaaagattatcaaagacattcac
aatatagacagtaattggaaacgaggaaattacaagatgactcgtatcaattgtcaatcg
gagaatagcaaaggagtctactgtcttcaatacgacgatgataaaattgtatcgggattg
agagataacaccattaagatctggaatcgaaaagactacacctgtagtcgaattctctcg
gggcataccggatctgttctatgccttcagtacgataaccgtgtcattatttctggatct
tccgatgctaccgttcgtgtttgggatgttgaaactggtgaatgcataaaaaccttgatc
caccattgtgaagctgtactccatcttcgattcgctaatggaattatggtcacctgctca
aaagatagatcgattgctgtttgggatatggtatcgccacgggatattactatacgaaga
gttcttgttggccaccgtgcagctgtgaatgtcgttgattttgatgatagatacattgtc
agtgcgagtggagatagaactatcaaagtctggtcaatggatactttggaattcgtgcga
actctttctggtcacagacgtggaattgcttgtcttcagtatcgtggacgactcgtggtt
tctggatccagtgataatacaattcggctttgggatatacattctggtgtctgtctacgt
gttcttgaaggtcacgaagaactcgttagatgcattcgattcgacgagaaacgtattgtc
tctggagcctacgacgggaaaatcaaagtgtgggaccttcaagctgcccttgatccacgt
gctctcgcaactgaaatttgtctatgctccttagttcaacacactggaagagttttccgt
ttgcaattcgatgatttccaaattgtctcatcttctcatgatgacactattctcatttgg
gacttcttggacgcaccagtgctacagaatgcacccgtcagagccactctgccagagctc
ccgaatcaagctgccgttgctcgcggcctaatgctcttcgaaatggctgcaagacgtgaa
attgaacgtcgtgatcgagaaattattgaagaacagcaaccaagagtcgtacctcgtggc
aataatggtcgtcgagtccaagaagcagcaatgattgtagttggtaatgcagtcaatcgc
aatccccccgtagacaatgatggatcatcgtcagacgaagaacttgaacgtggagatcaa
gcccatcccccagcacaaccgcacaaccagaatcatagaaggagacagccaagacctgag
ctgccggtgaggctcatgcaagaaatgaatgctgcattcgatttgcgacgaccgcatcac
aacttggaccatttagctggtggagatatagatgaagagatgcctgaaggcagaccataa
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