Caenorhabditis remanei (nematode): GCK72_006452
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Entry
GCK72_006452 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq00260
Glycine, serine and threonine metabolism
crq00270
Cysteine and methionine metabolism
crq00450
Selenocompound metabolism
crq00670
One carbon pool by folate
crq01100
Metabolic pathways
crq01230
Biosynthesis of amino acids
Module
crq_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GCK72_006452
00270 Cysteine and methionine metabolism
GCK72_006452
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GCK72_006452
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GCK72_006452
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crq04147
]
GCK72_006452
Enzymes [BR:
crq01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
GCK72_006452
Exosome [BR:
crq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GCK72_006452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Met_gamma_lyase
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Glyco_transf_28
Motif
Other DBs
NCBI-GeneID:
9818729
NCBI-ProteinID:
XP_053589825
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All DBs
Position
II:complement(12641757..12643023)
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AA seq
390 aa
AA seq
DB search
MSTFPHFGTAAIHVGQEPEQWDMNQVVPPISMSTTYKQDNPGEPVKHDYSRAGNPTRDVL
QKNLAALEDAKHCNLFASGLAATSAIINSLNRGDHIVCSDDVYGGTQRYINKISVSKHGL
EVTSVDLTEIENLEKSIKPNTKMVWFESPSNPLLKVVDIAAVVQVAKKANPEIVVVVDNT
FMTPYFQRPISLGADVVVHSITKYINGHSDVVMGAVITDNDEFQQHLFFMQLAVGAVPSP
FDCFLVNRGLKTLHIRMRAHYENALAVAKYLEANDRIESVLYPALESHPQHQVHQKQTKG
MSGMISFYLKGELQQSRSFLSALKVFTLAESLGGYESLAELPSIMTHASVPAETRAVLGI
TDNLIRISVGIEDLDDLIADLDQALKIAIP
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtctactttcccacatttcggaactgctgcaatccatgttggacaagaaccagaacaa
tgggatatgaatcaggtggttccaccgattagtatgtcgactacttataagcaagacaat
ccaggagaaccagtgaaacatgattattctcgggctggaaatccaactcgtgatgtactt
cagaagaatttggctgctcttgaagatgccaaacactgcaatctatttgcttctggtctc
gccgctacgtctgcaatcatcaattccctgaatcgtggagatcacattgtttgttctgat
gatgtttatggaggaactcagaggtatattaataaaatttctgtctcgaaacatggtttg
gaagtaacttctgtcgatttgacggaaatcgagaatctcgaaaagtcgatcaagccaaat
accaagatggtttggtttgagtccccatcgaatccacttctgaaagttgttgatattgct
gccgtcgttcaagttgccaagaaagcgaatccagaaatcgtcgtagtcgttgacaacaca
tttatgacaccatacttccaacgtccaatttctcttggagctgacgtcgtcgttcactcg
attacaaagtatatcaatggacattctgatgttgtaatgggagctgttatcactgataat
gatgaattccaacaacatcttttcttcatgcaattagccgtcggagcagtcccatcccca
ttcgattgtttccttgtaaaccgtggactcaagactcttcatatcagaatgagagctcat
tatgagaatgcattggctgttgccaagtatcttgaagccaatgatcgtatcgaatcagtc
ctttatccagcacttgaatctcatccacaacaccaagttcatcaaaaacaaacgaaagga
atgtctggaatgatttcattctatttgaagggagaactccaacagagtcgttcatttttg
tctgctctcaaagtattcacattggctgaatctctcggaggatatgaatcacttgctgaa
cttccatccatcatgactcatgcttcagtgcctgctgaaactcgtgctgttcttggaatc
actgacaatctcattcgtatttctgtcggaattgaggatctcgatgatttgattgctgat
ttggatcaagctctgaaaattgcaattccatga
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