KEGG   Caenorhabditis remanei (nematode): GCK72_006556
Entry
GCK72_006556      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K09291  nucleoprotein TPR
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GCK72_006556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crq03019]
    GCK72_006556
Messenger RNA biogenesis [BR:crq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GCK72_006556
SSDB
Other DBs
NCBI-GeneID: 9818734
NCBI-ProteinID: XP_053589876
UniProt: A0A6A5HFM0
LinkDB
Position
II:13045654..13053778
AA seq 2008 aa
MDVDAPVEAAEQPLVDPEDDLSNWEIERAELKRNEFNLNQELVDMRERVEDLSRTNGRIL
EELSRHGAEIKEHSNRQRVLEGVRNDLTNKNLELESAVARLKIEKEERDAAAVAATKLAQ
TAQIETYALKDQVQKLTYEQANFKHSKEALEKEIQSIQFERQKYTAERELHAESKRWLMQ
EVAERDNKVSSLRLELSNKDIQGANERLQYVQQINLLNSQVESLNEKIDMLQFSNSDLLK
RIENTELSNNTAVANLKEELRCQVEIQQEMKTSRDEAKNAADHFKDKLEAQENVLVEVRK
VLQEHQDDSERVNLSHAEEIRERDEVIAQTRAELAKVSEMMKSMSDVKLNVSEEELSELA
PAAAETVRYLRGSGQSLSSLVLEHARVHGKLAELESENDKLRTTLEQLLDTIEQNKPQII
SQRVVADEFFDKSNKYERQLDLAESERKELVSQRDTAQRDVAYLRAELEKYQRDFEFISK
RNAELMYAVERQSRVQDPNWNEQADEQLYQNIVQLQRRNVELESDIENAKTSAAQDAINA
QSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDSVTAAEARTAR
LRADEAVAAKVVADATIERLRVQAEEYKADHARREQELEQRVQATEAHITTVTETNIKLN
AMLDAQKTNTAAMEREYESAKKEKETAMEELRKATFADAEKERRMVDLGRQALEATDQAG
SLRVRVRSLEDELQSARTEVNCLRMTTDGQRNNLENEERVRMSVVEMANFLSRVEAEKLT
HANTQLDVLRLERDSLKASTTRLSDQLTHAKNDSKLVQQRLERELEVARKRLAEKEEQVA
RDEMELVDLRSKLALVHNQYTSADTAGMTPDRLKSEYNKLKTRTQLLENELDEAKRKLIQ
AETTQKRMDAENAISATHNNVLEENLKQSEQMSAMEKERLISDSKLFEDRAKQLTESLAQ
CQTELDELRKKNDEETFRFQTETAELRRQLDVSSLNLDGVKRDLEVANNSLLSSKNEATR
NAAALEQHTTIVRQFEDRISEIENARARIQAELNNKSAALVAETTAKNEADQLREHVERL
LQKKSEELDLLEAENRRKQAEYDAKLSQLSMQYESLSASLTNQSSAMELNDSSAEPSGLV
DNLQSLIQFNRQAKEEALSRAMNAEVEMRRLRAETAEFERGKNELLQKIRDLETEKIATA
ASLVDRANLIEKVQSLTTVYNVNTQLTEEKAKLQAQLVQVQTQKAELEKQQSMLSAKNEA
QKLKIQSSDSEASQLKREIEQLKQRAQQNVMPPNTKAHLEQLRNQLNAARQEAIAATERA
KASELAKNTAEEKFKEIQSKFNQTRQLAIRYRDENSELKKLTESTGEGDPCSARLAAQSK
IHSDEVGKLNTQIDALKKEAENLNMKVLRVNIMEKTLQKSNDQISELKQQNERLTETNRQ
LTTQQSSSATDVESKTATSSVPRNIPPFRQAPLKPNDPTTSVPKQPIEPDQTGGQKPLQH
PPSVPAKRYSFGRQIQPTSNVVPPAPAPTNTLQQRVSPMKRQLPPSIPNEPIDIIPPVPS
DNIPVVPDPTPPTSNTFGSMLPVPHTFQTSARVPTQSLFSSSSTTTVQPQGEKKNILPSI
DSAPSTPGGNPTSSLVTTTSSLVPGQPLFGNSSTTITASSSADNMVLPEESVVEGSAGQS
SLVSGSIDQQKPTDVDVAANDGESRDSTNVGGVSSSDGRRKRAANDSQLSEAKRQRESPN
EAVTSSETRQQSNMAEIPELDDEVLGVEQEVSDEDPNDVTNDESRQEVIDLENDEEAMDD
EMEGEEEDDDSFGNDEDFDDDNRVPEEDSDDDDVVVLSDGDDAPEDDNDAESLNDIDDGN
DIEEIEIEGSNNDDIGEVVGGEDSQPSLDDQDREAASAVEEAEDEGRDPLGPIDEPSAPA
DPTGAAGVGSSGRMGQEQRIRLPTGLREAEREDQCSSSNETNEERPGDRMQGRNLARLQQ
RPLRGAKPTRGVYTPSRGNRGGRGGGTA
NT seq 6027 nt   +upstreamnt  +downstreamnt
atggatgtcgacgcgcctgtcgaggcggcagaacagccactcgtcgatcccgaagacgat
ctgtcaaactgggagatcgaaagggcagagttgaagcggaatgaattcaatttgaaccaa
gagctggtagatatgcgggaacgagtcgaagatctatctcggacaaacggtcggattctc
gaagaactgtcgcgacacggagctgaaatcaaagagcatagtaatcgacaacgtgttctt
gaaggagttcggaatgacctgaccaataaaaatctcgagttggaatcagctgttgctcgt
ctgaaaatagaaaaagaagagcgtgatgctgctgccgtcgctgcaactaaattggcgcaa
acggctcaaattgaaacgtatgcgttgaaagaccaagttcagaaactcacttacgaacaa
gccaatttcaaacattcaaaggaagctcttgaaaaagaaattcagagtatacagttcgaa
cggcagaagtacacagctgaacgagagcttcacgctgagtcgaaacgctggttgatgcaa
gaggtggcggagcgggacaacaaagtttcgtcactgaggctcgaacttagcaacaaggac
attcaaggagccaatgaacgtcttcaatatgtgcaacagatcaaccttctcaattctcaa
gttgagagtctcaatgagaaaattgatatgcttcaattttcaaactcggatttgctcaag
agaattgaaaacactgaactgtccaacaacacagcagtcgccaatttgaaagaagagctc
cggtgtcaagttgaaatccaacaagagatgaaaacttctagagatgaagcgaaaaatgct
gcggatcactttaaggacaaattggaggcgcaggaaaatgtgctcgttgaggttcgtaag
gtgctccaagaacatcaagatgattcggaaagagtaaacctctcgcatgccgaagaaatc
cgagaacgtgacgaggtgattgctcagactcgcgctgaattggcaaaagtcagtgaaatg
atgaagagcatgagcgatgtgaagttgaatgtatcggaagaagaactttctgaacttgct
ccggctgccgctgaaaccgttcgttacttgagaggtagtggtcaatctctcagcagtcta
gtccttgaacatgctcgtgtgcatggaaagttggccgaattggaaagcgagaatgataaa
ctccgtactacactagagcaacttcttgacactatcgaacagaacaagcctcaaattatt
tctcagcgcgtggttgctgatgaatttttcgataaaagtaacaaatatgagaggcagctg
gatcttgctgaaagcgaaagaaaggaattggtctctcaacgcgatactgctcaacgggat
gttgcatacttacgagcagagttagagaaataccagagagatttcgagtttatctctaaa
agaaatgctgagttgatgtacgccgtagagcgacaaagcagagttcaagacccgaactgg
aacgaacaggcagatgagcagctctaccaaaacatagttcaattacaaagacgcaacgtc
gaacttgaatcggacatagaaaatgcaaagactagtgctgcacaagatgcgatcaacgct
caaagtgaagagatggctcagttgcgagccgatctggctgtaaccaaaaaatcggaagcg
gaacttaaaacaaaggtcgagcaaacgaaggcggcatttgatagcttgaaagagcgaact
gaacactttaaggaacttgttcgagacagtgtcactgcagctgaagcacgaaccgctcgt
ctaagagctgatgaggcggtcgctgctaaagttgtcgctgatgcaaccatcgaacgactg
agagttcaggctgaagagtacaaagcagatcatgcccgtcgtgaacaagagctggagcag
agagttcaagctaccgaagcacacatcactactgtcacggagactaacataaagctgaat
gcaatgctagacgctcaaaaaacgaacacagctgcgatggaacgagaatacgaatcagcg
aagaaagagaaagagactgctatggaagagttgagaaaggccacttttgctgatgctgaa
aaagaaagaagaatggtagatctcggacgacaagctttggaagccactgatcaagcaggc
agtctgagagttcgtgttcgatcattggaagatgagcttcagagtgcaagaaccgaggtt
aactgtttgagaatgacaactgatggccaaagaaacaatcttgagaacgaggagagagtg
agaatgtcagttgttgaaatggccaacttcttatcacgtgtcgaagctgaaaagttgact
catgcaaacactcagctagatgtacttcgtctcgaacgagacagtttgaaggcgtcgacc
accagactcagcgatcaactaactcacgctaagaacgattcaaaactcgttcagcaaaga
ttggaaagagagctggaggtggcaagaaaacgtttggcagagaaggaagagcaagtggct
cgtgatgagatggaacttgtcgatcttcgctcaaaacttgctttggtgcacaaccagtac
accagtgcagatactgctggtatgacacctgatcgtttgaagagtgagtacaacaagctg
aaaactcgaacacagttactagaaaatgaacttgacgaagctaagcgcaagttgatccaa
gctgagactactcaaaaacggatggatgctgaaaacgctatttctgcaacacataacaat
gttctcgaggagaatttgaagcagtccgagcaaatgagtgcgatggagaaagaaagattg
ataagtgattccaaattgttcgaagatcgtgcgaaacaactcactgaatctttggctcaa
tgtcaaacagaactcgatgagcttcggaagaaaaacgatgaggagacattccgtttccaa
accgaaaccgcagagcttcgtcgtcagttggatgtgtcttctctcaatctagacggagtc
aaacgagatcttgaagttgccaataatagtttgttgagctcgaaaaatgaagctaccaga
aacgcagcggctctagagcaacacacaactattgttcgtcaattcgaagatcgtatctct
gagatcgagaacgcccgagctcgtatccaagctgaactgaacaacaagagtgccgctctc
gtcgccgaaaccactgcaaagaatgaagctgatcagttgagagaacacgttgaacgacta
ttgcaaaagaaatccgaggagctcgatttgttggaagcagaaaatcgtagaaaacaagca
gaatacgacgcgaaactttcacagttgtcgatgcaatatgaatcgctatctgcctctctc
acgaatcaaagttccgccatggaactgaacgacagtagcgctgagccgtcaggattagtt
gataaccttcaatctcttattcaattcaatcgtcaagcaaaggaggaagcattgagtcgt
gctatgaatgccgaggtggaaatgagacgtcttcgcgcagagacagctgagttcgaacgt
ggaaagaacgaacttcttcagaagattcgtgatttggaaactgagaaaattgccactgct
gcttcattagtggatcgagcgaatttgattgaaaaagtgcagtcattgacaacggtgtac
aatgtcaacactcaacttactgaggagaaagccaaactccaagctcagttggttcaagtt
caaacccaaaaagctgagcttgaaaagcaacaatcgatgctctccgctaaaaatgaggca
cagaagctgaagattcaatcttcggattcagaagcttcgcaactgaagagagaaatcgaa
cagctgaagcaacgtgctcaacaaaatgttatgcctcctaacacgaaagctcatttggaa
cagctaagaaatcagttgaatgctgctcggcaagaagcaattgcagctacagaacgagct
aaagcttcagaactggcgaagaacactgctgaagaaaagttcaaggagatacagagcaag
ttcaatcaaacacgccagcttgccatcagatatcgtgatgagaattcggagttgaaaaaa
ctcacagaaagcactggagaaggtgatccatgttccgcacgcctcgcagctcaatcgaaa
attcactctgatgaagttggaaagcttaacactcaaattgatgctctcaaaaaagaagct
gaaaatttgaatatgaaggttttgcgtgtgaatattatggagaaaactcttcagaaatca
aatgaccaaatttctgaattgaaacagcagaatgaaagattgacagaaactaacaggcaa
cttacaacccaacagtcttcgtcagctactgatgtggagtcgaaaactgcaacgtcttca
gtcccgaggaacattcctccattccggcaggctccattgaagccgaatgaccctacaact
tccgtaccaaagcaaccgatcgaacctgatcaaactggtgggcagaaacctctgcaacat
ccaccatcagtacctgctaagagatactctttcggaagacagattcaaccaacttctaat
gtggtacctccggcaccggctccaacaaacactcttcaacagagggtttcaccaatgaag
agacagctgccaccatcgattccaaacgagccgatagatatcattcctcctgtaccatct
gataacattcctgttgttccagatccaacgccaccaacatcaaacacgtttggctccatg
ctaccggttccacacacattccaaacatctgctcgtgttccaacacagtctcttttctca
tcctcttccacaactactgtccaaccccaaggggagaaaaagaatatacttcctagcatt
gactctgctccaagcactccaggtggcaaccctactagctcgctcgttacaacaacatca
tcacttgttccaggacaaccgttatttggaaacagctcaactactatcactgcttcatca
tctgcagacaacatggttctccccgaagaaagcgttgtggaaggttccgctggtcagagt
agtcttgttagcggcagcattgatcagcagaaacctactgatgtagatgtagctgcgaac
gatggcgagtcacgagatagtacaaacgtgggaggagtatccagttcagatggtcggcgc
aagcgagctgctaacgattctcagttgagcgaagccaagcgtcaaagagaaagcccgaat
gaggctgtaaccagtagtgaaactcgccaacaaagcaatatggcggagattcccgaattg
gatgatgaagtccttggtgtcgagcaagaagtcagcgacgaagatccgaatgacgtcact
aacgacgagagtcgtcaagaagttattgatctagaaaacgacgaagaagcgatggatgat
gagatggaaggagaagaagaggatgatgacagttttggcaacgatgaagacttcgatgac
gataatagagttccagaggaggacagcgacgatgatgatgttgtcgtactctctgatgga
gatgatgctccggaggacgataatgatgcagaaagcttgaatgatatcgacgatggaaat
gacattgaagagatcgaaatcgaaggctcaaacaatgacgacattggagaagttgtaggg
ggagaggattcccaaccgtcacttgatgatcaagatcgtgaggctgcttctgctgtggag
gaggctgaagatgagggacgtgacccactcggaccaatcgatgagccaagtgctcctgct
gatccaactggagctgcaggtgttggaagttcaggaagaatgggtcaagaacagagaatt
cgcctcccaactggtcttcgtgaggctgagagagaagatcaatgctctagcagtaatgaa
accaacgaggagcgcccgggagatcgtatgcaaggacgtaacctcgctcgtcttcaacaa
cgtcctctccgaggagcgaaaccaacgcgtggagtctacacccccagccgtggtaaccgt
ggaggacgcggaggtggcactgcctaa

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