Caenorhabditis remanei (nematode): GCK72_006556
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Entry
GCK72_006556 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K09291
nucleoprotein TPR
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GCK72_006556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_006556
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GCK72_006556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
9818734
NCBI-ProteinID:
XP_053589876
UniProt:
A0A6A5HFM0
LinkDB
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Position
II:13045654..13053778
Genome browser
AA seq
2008 aa
AA seq
DB search
MDVDAPVEAAEQPLVDPEDDLSNWEIERAELKRNEFNLNQELVDMRERVEDLSRTNGRIL
EELSRHGAEIKEHSNRQRVLEGVRNDLTNKNLELESAVARLKIEKEERDAAAVAATKLAQ
TAQIETYALKDQVQKLTYEQANFKHSKEALEKEIQSIQFERQKYTAERELHAESKRWLMQ
EVAERDNKVSSLRLELSNKDIQGANERLQYVQQINLLNSQVESLNEKIDMLQFSNSDLLK
RIENTELSNNTAVANLKEELRCQVEIQQEMKTSRDEAKNAADHFKDKLEAQENVLVEVRK
VLQEHQDDSERVNLSHAEEIRERDEVIAQTRAELAKVSEMMKSMSDVKLNVSEEELSELA
PAAAETVRYLRGSGQSLSSLVLEHARVHGKLAELESENDKLRTTLEQLLDTIEQNKPQII
SQRVVADEFFDKSNKYERQLDLAESERKELVSQRDTAQRDVAYLRAELEKYQRDFEFISK
RNAELMYAVERQSRVQDPNWNEQADEQLYQNIVQLQRRNVELESDIENAKTSAAQDAINA
QSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDSVTAAEARTAR
LRADEAVAAKVVADATIERLRVQAEEYKADHARREQELEQRVQATEAHITTVTETNIKLN
AMLDAQKTNTAAMEREYESAKKEKETAMEELRKATFADAEKERRMVDLGRQALEATDQAG
SLRVRVRSLEDELQSARTEVNCLRMTTDGQRNNLENEERVRMSVVEMANFLSRVEAEKLT
HANTQLDVLRLERDSLKASTTRLSDQLTHAKNDSKLVQQRLERELEVARKRLAEKEEQVA
RDEMELVDLRSKLALVHNQYTSADTAGMTPDRLKSEYNKLKTRTQLLENELDEAKRKLIQ
AETTQKRMDAENAISATHNNVLEENLKQSEQMSAMEKERLISDSKLFEDRAKQLTESLAQ
CQTELDELRKKNDEETFRFQTETAELRRQLDVSSLNLDGVKRDLEVANNSLLSSKNEATR
NAAALEQHTTIVRQFEDRISEIENARARIQAELNNKSAALVAETTAKNEADQLREHVERL
LQKKSEELDLLEAENRRKQAEYDAKLSQLSMQYESLSASLTNQSSAMELNDSSAEPSGLV
DNLQSLIQFNRQAKEEALSRAMNAEVEMRRLRAETAEFERGKNELLQKIRDLETEKIATA
ASLVDRANLIEKVQSLTTVYNVNTQLTEEKAKLQAQLVQVQTQKAELEKQQSMLSAKNEA
QKLKIQSSDSEASQLKREIEQLKQRAQQNVMPPNTKAHLEQLRNQLNAARQEAIAATERA
KASELAKNTAEEKFKEIQSKFNQTRQLAIRYRDENSELKKLTESTGEGDPCSARLAAQSK
IHSDEVGKLNTQIDALKKEAENLNMKVLRVNIMEKTLQKSNDQISELKQQNERLTETNRQ
LTTQQSSSATDVESKTATSSVPRNIPPFRQAPLKPNDPTTSVPKQPIEPDQTGGQKPLQH
PPSVPAKRYSFGRQIQPTSNVVPPAPAPTNTLQQRVSPMKRQLPPSIPNEPIDIIPPVPS
DNIPVVPDPTPPTSNTFGSMLPVPHTFQTSARVPTQSLFSSSSTTTVQPQGEKKNILPSI
DSAPSTPGGNPTSSLVTTTSSLVPGQPLFGNSSTTITASSSADNMVLPEESVVEGSAGQS
SLVSGSIDQQKPTDVDVAANDGESRDSTNVGGVSSSDGRRKRAANDSQLSEAKRQRESPN
EAVTSSETRQQSNMAEIPELDDEVLGVEQEVSDEDPNDVTNDESRQEVIDLENDEEAMDD
EMEGEEEDDDSFGNDEDFDDDNRVPEEDSDDDDVVVLSDGDDAPEDDNDAESLNDIDDGN
DIEEIEIEGSNNDDIGEVVGGEDSQPSLDDQDREAASAVEEAEDEGRDPLGPIDEPSAPA
DPTGAAGVGSSGRMGQEQRIRLPTGLREAEREDQCSSSNETNEERPGDRMQGRNLARLQQ
RPLRGAKPTRGVYTPSRGNRGGRGGGTA
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgacgcgcctgtcgaggcggcagaacagccactcgtcgatcccgaagacgat
ctgtcaaactgggagatcgaaagggcagagttgaagcggaatgaattcaatttgaaccaa
gagctggtagatatgcgggaacgagtcgaagatctatctcggacaaacggtcggattctc
gaagaactgtcgcgacacggagctgaaatcaaagagcatagtaatcgacaacgtgttctt
gaaggagttcggaatgacctgaccaataaaaatctcgagttggaatcagctgttgctcgt
ctgaaaatagaaaaagaagagcgtgatgctgctgccgtcgctgcaactaaattggcgcaa
acggctcaaattgaaacgtatgcgttgaaagaccaagttcagaaactcacttacgaacaa
gccaatttcaaacattcaaaggaagctcttgaaaaagaaattcagagtatacagttcgaa
cggcagaagtacacagctgaacgagagcttcacgctgagtcgaaacgctggttgatgcaa
gaggtggcggagcgggacaacaaagtttcgtcactgaggctcgaacttagcaacaaggac
attcaaggagccaatgaacgtcttcaatatgtgcaacagatcaaccttctcaattctcaa
gttgagagtctcaatgagaaaattgatatgcttcaattttcaaactcggatttgctcaag
agaattgaaaacactgaactgtccaacaacacagcagtcgccaatttgaaagaagagctc
cggtgtcaagttgaaatccaacaagagatgaaaacttctagagatgaagcgaaaaatgct
gcggatcactttaaggacaaattggaggcgcaggaaaatgtgctcgttgaggttcgtaag
gtgctccaagaacatcaagatgattcggaaagagtaaacctctcgcatgccgaagaaatc
cgagaacgtgacgaggtgattgctcagactcgcgctgaattggcaaaagtcagtgaaatg
atgaagagcatgagcgatgtgaagttgaatgtatcggaagaagaactttctgaacttgct
ccggctgccgctgaaaccgttcgttacttgagaggtagtggtcaatctctcagcagtcta
gtccttgaacatgctcgtgtgcatggaaagttggccgaattggaaagcgagaatgataaa
ctccgtactacactagagcaacttcttgacactatcgaacagaacaagcctcaaattatt
tctcagcgcgtggttgctgatgaatttttcgataaaagtaacaaatatgagaggcagctg
gatcttgctgaaagcgaaagaaaggaattggtctctcaacgcgatactgctcaacgggat
gttgcatacttacgagcagagttagagaaataccagagagatttcgagtttatctctaaa
agaaatgctgagttgatgtacgccgtagagcgacaaagcagagttcaagacccgaactgg
aacgaacaggcagatgagcagctctaccaaaacatagttcaattacaaagacgcaacgtc
gaacttgaatcggacatagaaaatgcaaagactagtgctgcacaagatgcgatcaacgct
caaagtgaagagatggctcagttgcgagccgatctggctgtaaccaaaaaatcggaagcg
gaacttaaaacaaaggtcgagcaaacgaaggcggcatttgatagcttgaaagagcgaact
gaacactttaaggaacttgttcgagacagtgtcactgcagctgaagcacgaaccgctcgt
ctaagagctgatgaggcggtcgctgctaaagttgtcgctgatgcaaccatcgaacgactg
agagttcaggctgaagagtacaaagcagatcatgcccgtcgtgaacaagagctggagcag
agagttcaagctaccgaagcacacatcactactgtcacggagactaacataaagctgaat
gcaatgctagacgctcaaaaaacgaacacagctgcgatggaacgagaatacgaatcagcg
aagaaagagaaagagactgctatggaagagttgagaaaggccacttttgctgatgctgaa
aaagaaagaagaatggtagatctcggacgacaagctttggaagccactgatcaagcaggc
agtctgagagttcgtgttcgatcattggaagatgagcttcagagtgcaagaaccgaggtt
aactgtttgagaatgacaactgatggccaaagaaacaatcttgagaacgaggagagagtg
agaatgtcagttgttgaaatggccaacttcttatcacgtgtcgaagctgaaaagttgact
catgcaaacactcagctagatgtacttcgtctcgaacgagacagtttgaaggcgtcgacc
accagactcagcgatcaactaactcacgctaagaacgattcaaaactcgttcagcaaaga
ttggaaagagagctggaggtggcaagaaaacgtttggcagagaaggaagagcaagtggct
cgtgatgagatggaacttgtcgatcttcgctcaaaacttgctttggtgcacaaccagtac
accagtgcagatactgctggtatgacacctgatcgtttgaagagtgagtacaacaagctg
aaaactcgaacacagttactagaaaatgaacttgacgaagctaagcgcaagttgatccaa
gctgagactactcaaaaacggatggatgctgaaaacgctatttctgcaacacataacaat
gttctcgaggagaatttgaagcagtccgagcaaatgagtgcgatggagaaagaaagattg
ataagtgattccaaattgttcgaagatcgtgcgaaacaactcactgaatctttggctcaa
tgtcaaacagaactcgatgagcttcggaagaaaaacgatgaggagacattccgtttccaa
accgaaaccgcagagcttcgtcgtcagttggatgtgtcttctctcaatctagacggagtc
aaacgagatcttgaagttgccaataatagtttgttgagctcgaaaaatgaagctaccaga
aacgcagcggctctagagcaacacacaactattgttcgtcaattcgaagatcgtatctct
gagatcgagaacgcccgagctcgtatccaagctgaactgaacaacaagagtgccgctctc
gtcgccgaaaccactgcaaagaatgaagctgatcagttgagagaacacgttgaacgacta
ttgcaaaagaaatccgaggagctcgatttgttggaagcagaaaatcgtagaaaacaagca
gaatacgacgcgaaactttcacagttgtcgatgcaatatgaatcgctatctgcctctctc
acgaatcaaagttccgccatggaactgaacgacagtagcgctgagccgtcaggattagtt
gataaccttcaatctcttattcaattcaatcgtcaagcaaaggaggaagcattgagtcgt
gctatgaatgccgaggtggaaatgagacgtcttcgcgcagagacagctgagttcgaacgt
ggaaagaacgaacttcttcagaagattcgtgatttggaaactgagaaaattgccactgct
gcttcattagtggatcgagcgaatttgattgaaaaagtgcagtcattgacaacggtgtac
aatgtcaacactcaacttactgaggagaaagccaaactccaagctcagttggttcaagtt
caaacccaaaaagctgagcttgaaaagcaacaatcgatgctctccgctaaaaatgaggca
cagaagctgaagattcaatcttcggattcagaagcttcgcaactgaagagagaaatcgaa
cagctgaagcaacgtgctcaacaaaatgttatgcctcctaacacgaaagctcatttggaa
cagctaagaaatcagttgaatgctgctcggcaagaagcaattgcagctacagaacgagct
aaagcttcagaactggcgaagaacactgctgaagaaaagttcaaggagatacagagcaag
ttcaatcaaacacgccagcttgccatcagatatcgtgatgagaattcggagttgaaaaaa
ctcacagaaagcactggagaaggtgatccatgttccgcacgcctcgcagctcaatcgaaa
attcactctgatgaagttggaaagcttaacactcaaattgatgctctcaaaaaagaagct
gaaaatttgaatatgaaggttttgcgtgtgaatattatggagaaaactcttcagaaatca
aatgaccaaatttctgaattgaaacagcagaatgaaagattgacagaaactaacaggcaa
cttacaacccaacagtcttcgtcagctactgatgtggagtcgaaaactgcaacgtcttca
gtcccgaggaacattcctccattccggcaggctccattgaagccgaatgaccctacaact
tccgtaccaaagcaaccgatcgaacctgatcaaactggtgggcagaaacctctgcaacat
ccaccatcagtacctgctaagagatactctttcggaagacagattcaaccaacttctaat
gtggtacctccggcaccggctccaacaaacactcttcaacagagggtttcaccaatgaag
agacagctgccaccatcgattccaaacgagccgatagatatcattcctcctgtaccatct
gataacattcctgttgttccagatccaacgccaccaacatcaaacacgtttggctccatg
ctaccggttccacacacattccaaacatctgctcgtgttccaacacagtctcttttctca
tcctcttccacaactactgtccaaccccaaggggagaaaaagaatatacttcctagcatt
gactctgctccaagcactccaggtggcaaccctactagctcgctcgttacaacaacatca
tcacttgttccaggacaaccgttatttggaaacagctcaactactatcactgcttcatca
tctgcagacaacatggttctccccgaagaaagcgttgtggaaggttccgctggtcagagt
agtcttgttagcggcagcattgatcagcagaaacctactgatgtagatgtagctgcgaac
gatggcgagtcacgagatagtacaaacgtgggaggagtatccagttcagatggtcggcgc
aagcgagctgctaacgattctcagttgagcgaagccaagcgtcaaagagaaagcccgaat
gaggctgtaaccagtagtgaaactcgccaacaaagcaatatggcggagattcccgaattg
gatgatgaagtccttggtgtcgagcaagaagtcagcgacgaagatccgaatgacgtcact
aacgacgagagtcgtcaagaagttattgatctagaaaacgacgaagaagcgatggatgat
gagatggaaggagaagaagaggatgatgacagttttggcaacgatgaagacttcgatgac
gataatagagttccagaggaggacagcgacgatgatgatgttgtcgtactctctgatgga
gatgatgctccggaggacgataatgatgcagaaagcttgaatgatatcgacgatggaaat
gacattgaagagatcgaaatcgaaggctcaaacaatgacgacattggagaagttgtaggg
ggagaggattcccaaccgtcacttgatgatcaagatcgtgaggctgcttctgctgtggag
gaggctgaagatgagggacgtgacccactcggaccaatcgatgagccaagtgctcctgct
gatccaactggagctgcaggtgttggaagttcaggaagaatgggtcaagaacagagaatt
cgcctcccaactggtcttcgtgaggctgagagagaagatcaatgctctagcagtaatgaa
accaacgaggagcgcccgggagatcgtatgcaaggacgtaacctcgctcgtcttcaacaa
cgtcctctccgaggagcgaaaccaacgcgtggagtctacacccccagccgtggtaaccgt
ggaggacgcggaggtggcactgcctaa
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