Caenorhabditis remanei (nematode): GCK72_006570
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Entry
GCK72_006570 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03030
DNA replication
crq03420
Nucleotide excision repair
crq03430
Mismatch repair
crq03440
Homologous recombination
crq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCK72_006570
03420 Nucleotide excision repair
GCK72_006570
03430 Mismatch repair
GCK72_006570
03440 Homologous recombination
GCK72_006570
03460 Fanconi anemia pathway
GCK72_006570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crq03000
]
GCK72_006570
03032 DNA replication proteins [BR:
crq03032
]
GCK72_006570
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_006570
Transcription factors [BR:
crq03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
GCK72_006570
DNA replication proteins [BR:
crq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
GCK72_006570
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
GCK72_006570
MMR (mismatch excision repair)
GCK72_006570
DSBR (double strand breaks repair)
HR (homologous recombination)
GCK72_006570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
DUF223
CDC24_OB3
OB_MEIOB_N
Pox_vIL-18BP
Rep-A_N
DUF5830
IBR
Motif
Other DBs
NCBI-GeneID:
9815525
NCBI-ProteinID:
XP_003113459
UniProt:
E3LRP9
A0A6A5HL60
LinkDB
All DBs
Position
II:13110667..13112918
Genome browser
AA seq
656 aa
AA seq
DB search
MAEIQISHDVFNKYHTNGKLRLSTGFVQEVLEKQGYPGHDGIVQILKGKEDIGEQMGHPF
TYRIRICDGIFQYNTLVSADIDDQVRSESEHLVEGAIIAITNLTIFSQGAGVKTSFLITG
YKLLSRYHQVLSSPEVKPRSHSGNPEEHRGYRPNIVVEDLWPEADSWGTEFQENMSNPPA
AKMPKRESGGDTSVNRMAAPEPQRVRPAPPPARRGASNNGIIPIAMVTPYVNNFKIHGMV
SRKEDIRTFPAKNTRVFNFEVTDTNGDTIRCCAFNEAAESFFGMITENLSYYITGGSVRQ
ANKRYNNTGHDYEITLRSDSVIDAGGELLAAPKLNLRRVRLSEVAGHCGGLIDVLAVVDK
MDDEPTEFTSRAGKTLVKREMELIDESSAMVRLTLWGEEATKADAQEYQQKVVAFKGVIP
KEFNGGYTLGTGSGTRIILAPDIGGVADLYDWYHNTKPSAEVKMISQTSGGSNDVPRTIA
GLQEMQFGKDSEKGDYASVKAMITRINPNNALYKGCASEGCQKKVVETDGEYRCEKCNKS
MNKFKWLYMMQFELSDETGQVYVTAFGDTAAKVVGKTAAEIGDLKEENPEEYNGVFERIQ
FAPKMWKLRCKMETYNEETRQKMTVFGVDEVNQDKYIENLKQLIEQMKEIKDEGGY
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaattcaaatcagccatgacgtctttaacaagtaccatactaatggaaaactc
cgattatccactggctttgtccaagaagttctggagaagcaaggataccctggacacgac
ggtatcgtccaaattctgaaagggaaagaggacattggagagcagatgggacatcctttc
acatatagaattcgtatttgtgatggaatcttccagtacaatacactcgtcagtgccgat
atcgacgatcaagttagaagcgaatctgagcatctcgttgaaggagctatcattgccatt
actaatctcaccattttcagccaaggggctggagtgaagacttccttcctgataaccgga
tacaaacttctttctcgttaccatcaagtactgagctctcctgaagttaagccaagatct
cactctggtaacccagaagagcatcgtggctacagaccgaatatcgtcgttgaagattta
tggccagaagcagattcttggggcactgagttccaggagaacatgtcgaatccgccagca
gcaaaaatgccgaaaagagagagcggaggagatacatcagtcaatcgcatggctgctcca
gaaccacagcgcgttcgccctgctcctccaccagctcgtcgtggagcatccaataacgga
atcattcctattgcaatggtcactccttatgtcaacaacttcaaaatccatggtatggtc
tctcgaaaagaggatattcgtacattcccggcgaagaacacgagagtgttcaactttgaa
gtcactgacacaaatggagatactattcgatgctgtgcattcaatgaggctgctgagtca
ttcttcggaatgatcacagagaatctctcgtattatatcaccggtggatccgttcgccag
gctaacaagagatacaacaatactgggcacgattacgaaatcacccttcgcagcgattct
gttatcgacgccggaggcgagctactcgctgctccaaagcttaacttgaggagagtcaga
ttgtcggaggttgcaggacattgtggaggcttgatcgatgttctagctgttgtcgacaaa
atggatgacgaaccaacagagttcacatctagagctggaaagactcttgtcaaacgagaa
atggaactaatcgatgaatcgtcagcaatggtgcgattgactctgtggggagaagaggca
acaaaggcggatgctcaagagtatcaacaaaaagttgttgctttcaaaggagttattcca
aaagaattcaatggaggatacacattgggcactgggtctggaacacgcatcattctggct
cccgatattggcggagttgctgacctttatgactggtatcataacactaaaccgtccgcg
gaggtcaagatgatcagtcaaacttccggaggttcgaatgacgttccacggactattgcc
ggtcttcaagaaatgcaattcggaaaggattcagagaagggagattacgcttcagtgaag
gctatgatcacgagaatcaatccaaacaatgctctttacaaaggatgtgcttcagaaggt
tgtcagaagaaagtggtcgaaacagacggagagtaccgttgtgagaagtgcaataagagt
atgaacaagttcaagtggctctacatgatgcagtttgaactttctgatgaaactggacaa
gtttatgtgacggcgtttggagacactgctgcgaaagtggttggcaaaactgctgctgaa
atcggagatctgaaagaggaaaatccagaggagtacaatggagtattcgaacgtattcag
ttcgctccgaagatgtggaaactccgctgcaagatggaaacatataacgaagaaactcgt
cagaagatgaccgtctttggtgtcgatgaagtcaatcaagacaagtacatcgagaatctg
aaacaactcatcgagcagatgaaagagatcaaggatgaaggaggttactag
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