Caenorhabditis remanei (nematode): GCK72_006676
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Entry
GCK72_006676 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K13202
target of EGR1 protein 1
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crq03041
]
GCK72_006676
Spliceosome [BR:
crq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
GCK72_006676
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
9803972
NCBI-ProteinID:
XP_003109905
UniProt:
E3M197
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All DBs
Position
II:13502084..13505765
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AA seq
480 aa
AA seq
DB search
MSDEQAGNESESSSATSSASSDTVPPFSEIQIIEVNRDNFSKIWPYMLVCIKSADFIAMD
LELSGLGGQGLRSKDVQERYRAIRDAAHTRSILSVGITTMKLTHKSEKRRSLRYETQVFN
LLTLSEKPFTIEPSALQFLAKHSFDFNRLIQSGVQFQGVNCPLKTLFRELLGSSSTLCLH
NGLIDLAFLYKQMYGVDLPETLDEFVNNLSDLFPDDFLPVADSKYLAEYQTRYTSSYLEY
VFRRTQGDNEIERQNKRYHLEIVFPNPENRLKVLKDAIETVDVRLPEGFPDHAIPIDLHI
HTCKYFAAHGFCHALRSAKGCKMLHDVDAAIDLQRIKENKKSFKRKRRYNNVVAESVAEK
TGTDEAAWKDAKFEQRLLTRDFREQKRNVVTGLHRAGVDAFMTAFAVVYQQRRTLMTENS
VDLQYLNRIPLSAKDQPLHLRRRQIVPIAKKEENEEDAHLEAMKEINKQRVHVKKNALNT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgagcaagcaggaaacgaatcagaatcgtcctcagcgacaagttcagcgtca
tctgataccgtaccaccattctcagagattcaaattatcgaagtgaatcgtgacaatttt
tcgaaaatctggccgtacatgctggtttgtatcaagtcagcagactttattgcgatggat
ttagagttgagcggactcggaggtcaaggattacggtcgaaagatgtgcaggagagatat
cgagcgattcgggatgcagctcatactagaagtattctctccgtcggaatcactacaatg
aagctgacccacaaatcagagaaacgtcgatctcttcgttacgagactcaagtgttcaat
cttctgacactttccgaaaaaccattcacaatcgaaccatctgcacttcaatttctcgcc
aaacattccttcgatttcaatcgtctcattcagtccggagttcaatttcaaggtgtcaac
tgtccgttgaaaactcttttccgtgaacttctcggatcctcttcaactctttgtcttcac
aatggactcatcgatttggcatttctctataaacaaatgtatggagtcgatcttccagag
acacttgatgaattcgttaacaacttgagtgatctgttcccagatgacttcttgccagta
gctgattcaaagtatcttgcagagtatcagacaagatatacatcttcttatctggaatat
gtttttagaagaacccagggagacaacgaaattgagcgtcaaaacaagagatatcacctt
gaaatagtcttcccaaacccagaaaatcgtctgaaagtgctgaaagatgccatcgaaaca
gtggatgtccgtcttccagaaggatttccagatcatgcaatccctatcgatcttcatatt
cacacttgcaaatacttcgctgctcatgggttctgtcatgctttgagatcagcgaaagga
tgcaaaatgttgcatgacgtggatgcagccatcgatttgcaaagaattaaagagaacaaa
aagtcgttcaaacggaagagaagatataataatgtagttgctgagtcagttgctgaaaag
acgggaaccgatgaggcggcgtggaaagatgcgaaattcgaacagcgattgttgacgcga
gatttcagagagcagaagagaaatgtggtgactgggttgcatcgagctggagttgatgct
tttatgactgcatttgcagtggtttatcagcagagaagaactctgatgaccgagaattct
gtggatttgcagtacctcaaccgtattccattatctgccaaagatcagccacttcatctc
cgtcgtcgtcagatagtgccaatagccaaaaaagaagaaaacgaagaagacgcccatctt
gaagcaatgaaagaaatcaacaagcagagagtacatgtcaaaaagaatgcattgaatacc
taa
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