KEGG   Caenorhabditis remanei (nematode): GCK72_006894
Entry
GCK72_006894      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K12847  U4/U6.U5 tri-snRNP-associated protein 2
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GCK72_006894
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crq03041]
    GCK72_006894
Spliceosome [BR:crq03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    GCK72_006894
SSDB
Motif
Pfam: UCH zf-UBP UCH_1 zf-UBP_var Tautomerase_3
Other DBs
NCBI-GeneID: 9804013
NCBI-ProteinID: XP_053590066
UniProt: A0A6A5HJS7
LinkDB
Position
II:14316803..14321066
AA seq 633 aa
MSDGTPRNDHRSPTPEEPVERRRSIQEDTEKTTEKRSRNEEADDRDRRRSKDDKRVERNG
RSGESHRTHDRERKKRDRSRSRSRSRSPKRSKRDRKEEKTDQDAEDGEIRDTTPPVVEKP
REMTARELERQRIIAEELKNGQNDEGGEEPVWSMKKAQAEKKSRTCPYLDTIDRSVLDFD
FEKQCSVSLSHQNVYACMVCGKYFQGRGTNTHAYTHALETDHHVFLNLQTLKFYCLPDNY
EVVDPSLEDIKYVLKPTYTKEMIASIDKQARMVRAYDDSTYFPGVVGLNNIKANDYCNVI
LHALSAVRPLRNWFLKESNYLAIKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEM
LQAVVVCSNKKYQFIKQNDAYDFMLFLLTTLHTALNGTEKRESIISKTFRGKMREYSRKV
IPAEDTDEEKYMKMRMPDYQERVSEKPFLFLTLDLPAAPLYRDVQLQNIIPQVPLSTLLE
KFNGKTEKEYRTYNDNIMKRYELLKLPEFLIISYKRFQKNQWFVEKNPTIVNFPIVNVDL
YECLAEDARADNKYTTYDLVANVVHEGTFETGNYRIQIVHQGSGKWYELEDLHVKDMLPQ
MIVLAESYIQIWRLNKEKTRDERGEDDEEPMES
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgtctgacggaacacccagaaatgaccacaggtcaccgacaccagaggaaccggtggaa
aggaggcgttcgattcaagaggacaccgagaaaaccacagaaaagcgatctcggaacgaa
gaagctgacgatagggatagaagacgatccaaagacgacaaaagagttgaaagaaatgga
cggagcggcgaatctcacagaacccacgaccgagaaagaaagaaaagagatcggagtagg
tcgagatctcgatcaagatctccaaaacgctcaaagcgtgatagaaaggaggagaagacg
gatcaagacgcggaggacggagagatccgcgatacaacaccgcccgtcgttgagaagcca
cgtgagatgacagcaagagagctggaacggcaacggattattgcggaagagttgaagaat
ggtcagaatgatgagggcggagaagagccggtttggtcgatgaagaaggctcaagctgaa
aaaaagagcagaacttgtccgtatttggatactatcgatagatccgtcttggactttgat
ttcgagaagcaatgctccgtgtcgctctcccatcagaatgtgtacgcgtgcatggtgtgc
ggaaagtatttccagggccgcggaacgaacactcatgcctacacccatgcactcgaaacc
gatcatcacgtcttcctgaatcttcaaacgctgaaattctactgtttgcccgacaattat
gaagtcgtggatccgtcgttggaggacataaaatatgtgttgaagccgacgtatacgaaa
gaaatgattgcgtccatcgataaacaggcgagaatggttcgagcttatgacgattcgact
tacttccctggagtcgttggactcaataatatcaaggctaatgactattgtaatgtcatt
cttcatgcgctctccgccgtccgtcctcttcgtaattggttcctgaaagagtccaattac
ttggcaatcaaacgaccgccaggagataagctcactctcctcccacagagattcggtgag
ctcatccggaagctgtggaatccgagagctctccgtacccacgtgtctcctcacgaaatg
ctccaagcggtggtcgtttgttcgaataagaagtatcaattcatcaagcagaatgatgca
tacgacttcatgcttttcctgttgacgacactacatacggcactaaatggaaccgagaaa
agggagagcatcatttccaaaacattccgcggaaagatgcgagaatactcccgtaaagtc
atcccagccgaagacacggacgaggagaagtatatgaagatgcgaatgcccgactaccag
gaaagagtctccgagaagccgttcctcttcttaactcttgatctaccagcggctcctctc
taccgtgacgttcaacttcagaatatcatccctcaagtgccactcagcactctcctcgag
aaattcaatggaaaaacggagaaagagtacagaacctacaatgacaatattatgaagcga
tatgagctgttgaagctccccgagttcctcatcatctcctacaaacgattccaaaagaat
cagtggttcgttgagaagaatcccaccatcgtcaacttccccatcgtcaatgttgatcta
tacgagtgtttggcggaggatgcgagagccgataacaagtacacaacgtacgatcttgtg
gcaaatgtggttcatgaggggacttttgaaactggaaactatcgaattcaaatcgtccat
cagggttccggaaagtggtatgaattggaagatctgcacgtgaaggacatgctgccccag
atgatcgtccttgccgaatcgtatattcaaatctggagactcaacaaggagaagacgaga
gatgagagaggagaggatgatgaggaaccgatggagtcataa

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