KEGG   Caenorhabditis remanei (nematode): GCK72_006935
Entry
GCK72_006935      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K06634  cyclin H
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03022  Basal transcription factors
crq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GCK72_006935
  09124 Replication and repair
   03420 Nucleotide excision repair
    GCK72_006935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crq03021]
    GCK72_006935
   03400 DNA repair and recombination proteins [BR:crq03400]
    GCK72_006935
Transcription machinery [BR:crq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     GCK72_006935
DNA repair and recombination proteins [BR:crq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     GCK72_006935
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB ANIS5_cation-bd
Other DBs
NCBI-GeneID: 9804442
NCBI-ProteinID: XP_003109878
UniProt: E3M1M6
LinkDB
Position
II:complement(14518916..14521043)
AA seq 330 aa
MYSTSTQKREWTYTPEKLAAVRLEINITFRQKYESVMKPEELELFVTPEEELRMQRSIED
AALKFADKFRPHIWPSVKWTALSFFKRAFLVWVPSDTSIRMVMMACFYLAMKIDEFYITI
EDFVRNMNVGDPRQNAERILKLEPELMKCLNYNLTVHCPYRPFEGHLMDMKTRMLLLNFD
LESIRRDSMRFFQHALQTDVLLLYPPSQIALAAINYGLHAQGKSDEILREFLRKLIGIEE
DSWAARDARPEDLEKLEKTVTRVNQILKEVEKQYVAVTEQERESHKSQLSRIQALIPELD
ERRKAEWEAGGRIGQMPGAVTEQPVDSDDE
NT seq 993 nt   +upstreamnt  +downstreamnt
atgtactcaacaagcacacaaaaacgagagtggacatatacaccggagaaattggccgct
gtccgattggagatcaatatcacatttcgacaaaaatacgaatcagtgatgaagccagag
gagctggaactctttgtgacgccagaagaggaactgagaatgcaaagatcgatagaggat
gctgcgttgaaattcgccgacaaattccgtccccacatctggccatcagtcaaatggacg
gccctctcgttcttcaagcgagcattcctcgtttgggtgccatcggacacttctattcga
atggtcatgatggcttgcttttacttggccatgaagatcgatgagttctatataactatt
gaagatttcgtcaggaacatgaatgtcggcgatccccgtcaaaacgccgaacgcattctg
aaattggagccagagctcatgaaatgtctcaactacaatctgacagttcactgcccgtac
cgaccatttgaaggtcatttgatggatatgaagacccgaatgcttctgctcaacttcgat
cttgaatcgattcgtcgtgattcgatgagattctttcagcatgctctccaaaccgatgtc
ctcctcctctacccaccatcacaaatcgctctcgccgcgattaattacggactccacgct
caaggaaagtctgacgaaattttgcgtgaattcctccgaaaattgattggaattgaggag
gactcgtgggcggcccgtgatgcgcgaccggaagatttggagaaacttgagaagactgtc
accagagtcaaccaaatcctgaaggaagtggagaaacagtatgtcgcggtcacggagcaa
gagcgtgagagtcacaagagccaactctcccgcattcaggctctcatcccagagctcgat
gagcgtagaaaggcggaatgggaagctggaggacgtattgggcagatgccaggagcagtg
acggagcagccggtggattcagatgacgagtga

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