Caenorhabditis remanei (nematode): GCK72_006935
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Entry
GCK72_006935 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K06634
cyclin H
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03022
Basal transcription factors
crq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCK72_006935
09124 Replication and repair
03420 Nucleotide excision repair
GCK72_006935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_006935
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_006935
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GCK72_006935
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GCK72_006935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
9804442
NCBI-ProteinID:
XP_003109878
UniProt:
E3M1M6
LinkDB
All DBs
Position
II:complement(14518916..14521043)
Genome browser
AA seq
330 aa
AA seq
DB search
MYSTSTQKREWTYTPEKLAAVRLEINITFRQKYESVMKPEELELFVTPEEELRMQRSIED
AALKFADKFRPHIWPSVKWTALSFFKRAFLVWVPSDTSIRMVMMACFYLAMKIDEFYITI
EDFVRNMNVGDPRQNAERILKLEPELMKCLNYNLTVHCPYRPFEGHLMDMKTRMLLLNFD
LESIRRDSMRFFQHALQTDVLLLYPPSQIALAAINYGLHAQGKSDEILREFLRKLIGIEE
DSWAARDARPEDLEKLEKTVTRVNQILKEVEKQYVAVTEQERESHKSQLSRIQALIPELD
ERRKAEWEAGGRIGQMPGAVTEQPVDSDDE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtactcaacaagcacacaaaaacgagagtggacatatacaccggagaaattggccgct
gtccgattggagatcaatatcacatttcgacaaaaatacgaatcagtgatgaagccagag
gagctggaactctttgtgacgccagaagaggaactgagaatgcaaagatcgatagaggat
gctgcgttgaaattcgccgacaaattccgtccccacatctggccatcagtcaaatggacg
gccctctcgttcttcaagcgagcattcctcgtttgggtgccatcggacacttctattcga
atggtcatgatggcttgcttttacttggccatgaagatcgatgagttctatataactatt
gaagatttcgtcaggaacatgaatgtcggcgatccccgtcaaaacgccgaacgcattctg
aaattggagccagagctcatgaaatgtctcaactacaatctgacagttcactgcccgtac
cgaccatttgaaggtcatttgatggatatgaagacccgaatgcttctgctcaacttcgat
cttgaatcgattcgtcgtgattcgatgagattctttcagcatgctctccaaaccgatgtc
ctcctcctctacccaccatcacaaatcgctctcgccgcgattaattacggactccacgct
caaggaaagtctgacgaaattttgcgtgaattcctccgaaaattgattggaattgaggag
gactcgtgggcggcccgtgatgcgcgaccggaagatttggagaaacttgagaagactgtc
accagagtcaaccaaatcctgaaggaagtggagaaacagtatgtcgcggtcacggagcaa
gagcgtgagagtcacaagagccaactctcccgcattcaggctctcatcccagagctcgat
gagcgtagaaaggcggaatgggaagctggaggacgtattgggcagatgccaggagcagtg
acggagcagccggtggattcagatgacgagtga
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