KEGG   Caenorhabditis remanei (nematode): GCK72_007113
Entry
GCK72_007113      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crq03019]
    GCK72_007113
   03041 Spliceosome [BR:crq03041]
    GCK72_007113
Messenger RNA biogenesis [BR:crq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     GCK72_007113
Spliceosome [BR:crq03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    GCK72_007113
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded PHM7_cyt RRM_7 RRM_Nup35 Nup35_RRM_2 RRM_PARP14_3 RRM_MARF1 Calcipressin DUF4523
Other DBs
NCBI-GeneID: 9826176
NCBI-ProteinID: XP_053590180
UniProt: A0A6A5HKN2
LinkDB
Position
II:15243388..15247020
AA seq 407 aa
MSSFYSSGDDNNGYNPRIHSRYAEREGYHLASGSEDPRTLFVGNLDPAITDEFLATLFNQ
IGAVTKAKIIFDGLNDPFAFVEFSDHNQASQALQSMNGRQLLEREMRVNWAVEPNQPGDR
NKPETSRHFHVFVGDLSAEIDSTKLREAFLPFGEVSEAKIIRDNATNKAKGYGFVSYPRR
EDAERAIEQMNGQWLGRRTIRTNWATRKPEEEGGERRERDRNERGDRPHRGEGRHHHFEK
TYDEVFREAAADNTSVYVGNINSLTEDEIRRGFERFGQIVEVRIFKSQGYAFVKFEQKES
AARAIVQMNNQDVSGQMVRCSWGKSGDGGKGGGGDRHAYGYGGSGGGGSSSNFTPFGSGS
GPAGGPPAAGGNSSQYWQYYAQYYNNPQLMQQWSSYWQQGKQGPPPS
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgtcgtcattctacagtagtggagacgacaacaacggctacaacccgcggattcactct
cgatacgccgagcgcgaaggatatcatttggcgtcgggatccgaagacccacggacctta
tttgtcggaaatctcgatccagccatcaccgacgagttcctcgccacactcttcaatcag
ataggtgcagtgacaaaagcaaagattattttcgatggactcaacgatccgttcgcgttc
gtcgagttctcggaccacaaccaggcgtcgcaggctctccaatcgatgaatggacgtcaa
cttctcgagcgcgaaatgcgagtgaactgggcggtcgaaccgaatcaacccggagatcgt
aacaagccagaaacctctcgtcacttccacgtcttcgtcggagatctctccgctgaaata
gactcgacgaagcttcgcgaggcgttcctcccattcggagaagtgtcggaagcgaaaatt
attcgagacaatgcgacaaacaaagccaagggatacggatttgtctcatacccgagaaga
gaagacgccgagagagctattgagcaaatgaatggccaatggttgggacggagaacgatt
cgtacaaattgggcgaccagaaagcctgaagaggaaggaggagaacgtcgggagcgagat
agaaatgaaagaggggatcgaccacatcgaggtgaaggacgacatcatcacttcgagaag
acgtatgatgaggtgtttagagaggcggcagctgacaacacgtccgtctatgttggaaat
atcaactccctcactgaggatgagattcgtcgtggcttcgagcgattcggtcaaatcgtc
gaggttcgaatcttcaagtctcaaggatacgccttcgtcaaattcgagcagaaggagtcg
gccgcccgtgcaatcgtccagatgaacaatcaggatgtgagcggtcaaatggttcgatgc
agttggggaaagagtggagatggcggaaaaggaggtggaggtgaccgtcatgcttacggt
tacggtggaagtggtggtggaggatcaagcagcaacttcacaccgttcggatctggaagt
ggtccagctggaggtccgccagcggctggcggcaacagcagccagtactggcagtactat
gcccagtactacaataatccacaattgatgcaacagtggtcgagctactggcagcaaggg
aagcaaggaccgccgccgagttaa

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