Caenorhabditis remanei (nematode): GCK72_007113
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Entry
GCK72_007113 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_007113
03041 Spliceosome [BR:
crq03041
]
GCK72_007113
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
GCK72_007113
Spliceosome [BR:
crq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
GCK72_007113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
PHM7_cyt
RRM_7
RRM_Nup35
Nup35_RRM_2
RRM_PARP14_3
RRM_MARF1
Calcipressin
DUF4523
Motif
Other DBs
NCBI-GeneID:
9826176
NCBI-ProteinID:
XP_053590180
UniProt:
A0A6A5HKN2
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All DBs
Position
II:15243388..15247020
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AA seq
407 aa
AA seq
DB search
MSSFYSSGDDNNGYNPRIHSRYAEREGYHLASGSEDPRTLFVGNLDPAITDEFLATLFNQ
IGAVTKAKIIFDGLNDPFAFVEFSDHNQASQALQSMNGRQLLEREMRVNWAVEPNQPGDR
NKPETSRHFHVFVGDLSAEIDSTKLREAFLPFGEVSEAKIIRDNATNKAKGYGFVSYPRR
EDAERAIEQMNGQWLGRRTIRTNWATRKPEEEGGERRERDRNERGDRPHRGEGRHHHFEK
TYDEVFREAAADNTSVYVGNINSLTEDEIRRGFERFGQIVEVRIFKSQGYAFVKFEQKES
AARAIVQMNNQDVSGQMVRCSWGKSGDGGKGGGGDRHAYGYGGSGGGGSSSNFTPFGSGS
GPAGGPPAAGGNSSQYWQYYAQYYNNPQLMQQWSSYWQQGKQGPPPS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcattctacagtagtggagacgacaacaacggctacaacccgcggattcactct
cgatacgccgagcgcgaaggatatcatttggcgtcgggatccgaagacccacggacctta
tttgtcggaaatctcgatccagccatcaccgacgagttcctcgccacactcttcaatcag
ataggtgcagtgacaaaagcaaagattattttcgatggactcaacgatccgttcgcgttc
gtcgagttctcggaccacaaccaggcgtcgcaggctctccaatcgatgaatggacgtcaa
cttctcgagcgcgaaatgcgagtgaactgggcggtcgaaccgaatcaacccggagatcgt
aacaagccagaaacctctcgtcacttccacgtcttcgtcggagatctctccgctgaaata
gactcgacgaagcttcgcgaggcgttcctcccattcggagaagtgtcggaagcgaaaatt
attcgagacaatgcgacaaacaaagccaagggatacggatttgtctcatacccgagaaga
gaagacgccgagagagctattgagcaaatgaatggccaatggttgggacggagaacgatt
cgtacaaattgggcgaccagaaagcctgaagaggaaggaggagaacgtcgggagcgagat
agaaatgaaagaggggatcgaccacatcgaggtgaaggacgacatcatcacttcgagaag
acgtatgatgaggtgtttagagaggcggcagctgacaacacgtccgtctatgttggaaat
atcaactccctcactgaggatgagattcgtcgtggcttcgagcgattcggtcaaatcgtc
gaggttcgaatcttcaagtctcaaggatacgccttcgtcaaattcgagcagaaggagtcg
gccgcccgtgcaatcgtccagatgaacaatcaggatgtgagcggtcaaatggttcgatgc
agttggggaaagagtggagatggcggaaaaggaggtggaggtgaccgtcatgcttacggt
tacggtggaagtggtggtggaggatcaagcagcaacttcacaccgttcggatctggaagt
ggtccagctggaggtccgccagcggctggcggcaacagcagccagtactggcagtactat
gcccagtactacaataatccacaattgatgcaacagtggtcgagctactggcagcaaggg
aagcaaggaccgccgccgagttaa
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