KEGG   Caenorhabditis remanei (nematode): GCK72_007919
Entry
GCK72_007919      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K13151  snurportin-1
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GCK72_007919
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crq03041]
    GCK72_007919
Spliceosome [BR:crq03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    GCK72_007919
SSDB
Motif
Pfam: SPN1_m3Gcap_bd Snurportin1 IBB DNA_ligase_A_M
Other DBs
NCBI-GeneID: 9826724
NCBI-ProteinID: XP_053590730
UniProt: A0A6A5HKD4
LinkDB
Position
II:18722311..18727902
AA seq 325 aa
MGDELDALTSQLSSGFQVDPAALGEHPRYSQFKNLSKAAEQQAKRREETLERQKNGRFDK
MMKLRNLAFDDTTSDEEDADGFVEVKSKAACKKNKFGRYADKLMLSEWLVDIPDSLSTEW
TMVMAPTGKRCLVVASRGYTTSYNKAGRQLGQFQSRLPGGNSRSKNQSWTILDCIYANQV
YHVLDVLTWNAHEFAENPYDFRQFMLKSKLDEQPELATPTAGFRAVFVAAPSAPCSKEQM
EELMKAEIDFRLDGLLFYHKSVIYEPGQSPLVGWLKPWMLPEILSVTIPEKYEKESNGQS
SAEYIESYNQKHKHQSKIDRTMEQD
NT seq 978 nt   +upstreamnt  +downstreamnt
atgggggacgagttggacgcgttgacaagccaattgagcagtggatttcaagtcgacccg
gctgcactcggcgaacatcctcgatactctcaattcaaaaatttatcaaaagcggcggag
caacaagcgaaacgacgtgaagagacattggaacgacaaaagaatggacgattcgataaa
atgatgaaattgaggaatctggcgttcgacgacacgacttcagatgaggaagacgccgac
ggatttgtggaagtcaagtcgaaggcggcttgcaagaagaataagtttggaagatacgcc
gacaaattgatgttaagtgagtggttggtcgacattccagactcactttcaactgaatgg
acaatggtgatggcaccgactggaaagaggtgtttggtcgttgcttcgaggggatacacg
acatcttacaataaagcgggtcgccaactcggacaatttcaatctcgactccctggtggt
aatagtcgatcgaagaaccaatcatggacaattctcgactgtatctacgcgaatcaagtg
tatcacgtgttggacgtcttgacatggaatgcacacgaattcgccgagaatccgtacgat
tttcgtcaatttatgctcaaatcgaagctcgacgagcagcccgagttggccacgcccacc
gccggattcagggcggtttttgtggcggcgccaagtgctccgtgctcaaaagagcaaatg
gaagagttgatgaaggcggagattgatttccgcctcgacggtctcctcttctatcacaaa
tctgtgatctacgagccgggacagtcgccactcgtcggatggctgaaaccatggatgttg
ccagagattctcagtgtgactataccagaaaaatatgaaaaagagtcgaatggacaatcg
tctgctgaatacatcgaatcgtacaatcagaaacacaaacatcaatcgaaaatcgatcga
actatggaacaggattag

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