KEGG   Caenorhabditis remanei (nematode): GCK72_007977
Entry
GCK72_007977      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K12825  splicing factor 3A subunit 1
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GCK72_007977
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crq03041]
    GCK72_007977
Spliceosome [BR:crq03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    GCK72_007977
 Complex B
    GCK72_007977
 Complex C
   U2 SnRNP specific factors
    GCK72_007977
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin
Other DBs
NCBI-GeneID: 9806800
NCBI-ProteinID: XP_003097165
UniProt: E3N371
LinkDB
Position
II:complement(<19094418..>19101683)
AA seq 664 aa
MLSRVSNREEDSMNNEPTLSGKTIIGLINPPPDIRTIVDKTARFVAKNGVDFENKIREKE
AKNPKFNFLSITDPYHAYYKKMVYDFSEGRVEAPKVPQAVKEHVKKAEFVPSAPPPAYEF
SADPSTINAYDLDLIRLVALFVARNGRQFLTQLMTREARNYQFDFLKPAHCNFTYFTKLV
EQYQKVLVPATNVVGQLLDDASNKKRLLEDINYRVSWEKHQKGLKDREEAEAEKERMAYA
QIDWHDFVVVQTVDFQPGDSSQLPPLCTPKDVGARILLEARNEMQKAAAEMQEMDMEESD
SEDEDVGDKTAPESSFTAPLPPTKQKDVIVRDYDPKRNQPTTQKKAVENWIISPLTGERI
PSDKLAEHVRYNTVDSQYKEDRDRHIGERSTEEPVLALGADISRNLGQFAERRTDIFGVG
GEQTMIGKKLGEEDNSQQGQSNKLIWDGTEETRDMITRAVQNQVTIDQQINEIHRQHGFI
ADPSKEKIGAQQQLPRHQTTQGNVTITQGIANLPGQMPWPGGPGGPPMGMMPPGGQGLPP
HMRPPMEFGGAGGPPAKRARTEEDLEPEEEWLKKVNGTIELIVQLPQAPENGMDGSFVQF
SVQVTAPMSELKQQIQDRYGMGIGKQKLLSDGFFVKDNLSAAYYNLHNRSLIVLQVKERG
GKKK
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgctgtcaagagtgtcaaatcgagaggaggactcgatgaacaacgagccgacgctttcc
ggcaaaacgatcatcggtttgatcaatccgccgcccgatattcgaacgatcgtcgacaag
accgcgcgtttcgtggcgaaaaacggagtggatttcgagaataaaattcgcgaaaaagag
gcgaaaaacccgaaattcaattttctctcgattaccgatccatatcatgcgtactataag
aaaatggtctacgatttctcggagggacgagtcgaggcgccaaaggtgccccaggcagtc
aaagaacacgtcaagaaagcggaattcgtcccgtcggcaccaccgccagcttacgagttt
tcagctgatccatccactattaatgcctatgatcttgatctcattcgtctggtcgcctta
ttcgttgcccgaaacggtcgtcaattcctgacccaattaatgacgagagaagcgagaaat
tatcaattcgatttcttgaaacccgctcattgtaacttcacctacttcacaaagctcgtc
gagcagtatcagaaggtcctcgttccggccaccaacgtcgtcggccaacttctcgacgac
gcttctaacaaaaaacgtcttctggaagacatcaattatcgtgtttcatgggaaaaacat
caaaaaggactcaaagatcgcgaagaggcggaagcggagaaggaacgaatggcctatgcg
caaattgattggcacgattttgttgtggtgcagactgtcgattttcagccgggcgactca
tcccaactccctccactctgcaccccgaaggatgtcggtgccagaattctcctggaagcg
cgaaacgaaatgcaaaaagcggccgctgaaatgcaagaaatggatatggaagagagtgat
tcagaagacgaagacgtcggcgacaaaacggctccagaatcctcgttcacagctccactt
ccaccgacgaagcagaaggatgtgattgtgagggattatgatccgaagagaaatcagccg
acgacacagaagaaagctgtggagaattggattatttctccacttacaggagaacgaatt
ccatcggataagctcgccgagcacgtcagatataatactgtcgattcacagtataaagag
gatagagatcgtcatattggagagagatccactgaggaaccggtgctggcgctgggagcc
gatatttcgagaaatctgggtcaattcgccgaacgtcgtaccgacatctttggtgtcggc
ggtgagcagacgatgatcggaaagaaattgggcgaagaggacaactcccagcagggacaa
tcgaataaactgatttgggatggaactgaggagacgagagatatgattacaagggcggtc
cagaatcaagtcactattgaccaacaaatcaacgaaatccaccgtcaacacggcttcatt
gccgatccgtcgaaagagaagatcggtgctcaacagcagttgccacgtcatcagacgact
caaggaaatgtgacgatcactcagggaatcgctaatcttcccggacaaatgccatggcca
ggcggtccagggggaccaccgatgggaatgatgccacctggtggtcaagggcttccaccc
cacatgcgtccacctatggaattcggaggagccggtggtccaccagcaaaacgtgctcga
actgaagaagatttggagccggaagaggagtggttgaagaaagtgaatggaacgatcgag
ttgatcgtccaattgccacaagcacccgaaaatggaatggacggatcgtttgtacaattc
agtgtacaagtcacggcgccgatgtccgaactgaagcaacaaatccaggatcgttacgga
atgggcatcggaaagcagaagttgttgagcgacggattctttgtgaaagacaatttgagc
gccgcctactataatctccacaatcgatcccttatcgtacttcaagtcaaagaacgcggt
ggaaagaagaaatga

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